From b6204db0ddebb51441b397cd8c79418022ea8830 Mon Sep 17 00:00:00 2001 From: Shyue Ping Ong Date: Thu, 8 Jul 2021 16:05:34 -0700 Subject: [PATCH] Update dev docs --- docs/_modules/index.html | 4 +-- docs/_modules/monty/bisect.html | 4 +-- docs/_modules/monty/collections.html | 4 +-- docs/_modules/monty/design_patterns.html | 4 +-- docs/_modules/monty/dev.html | 4 +-- docs/_modules/monty/fnmatch.html | 4 +-- docs/_modules/monty/fractions.html | 4 +-- docs/_modules/monty/functools.html | 4 +-- docs/_modules/monty/inspect.html | 4 +-- docs/_modules/monty/io.html | 4 +-- docs/_modules/monty/itertools.html | 4 +-- docs/_modules/monty/json.html | 23 ++++++++----- docs/_modules/monty/logging.html | 4 +-- docs/_modules/monty/math.html | 4 +-- docs/_modules/monty/msgpack.html | 4 +-- docs/_modules/monty/multiprocessing.html | 4 +-- docs/_modules/monty/operator.html | 4 +-- docs/_modules/monty/os.html | 4 +-- docs/_modules/monty/os/path.html | 4 +-- docs/_modules/monty/pprint.html | 4 +-- docs/_modules/monty/re.html | 4 +-- docs/_modules/monty/serialization.html | 41 +++++++++++++---------- docs/_modules/monty/shutil.html | 4 +-- docs/_modules/monty/string.html | 4 +-- docs/_modules/monty/subprocess.html | 4 +-- docs/_modules/monty/tempfile.html | 4 +-- docs/_modules/monty/termcolor.html | 4 +-- docs/_static/documentation_options.js | 2 +- docs/_themes/README.html | 4 +-- docs/changelog.html | 12 +++++-- docs/genindex.html | 4 +-- docs/index.html | 4 +-- docs/modules.html | 4 +-- docs/monty.bisect.html | 4 +-- docs/monty.collections.html | 4 +-- docs/monty.design_patterns.html | 4 +-- docs/monty.dev.html | 4 +-- docs/monty.fnmatch.html | 4 +-- docs/monty.fractions.html | 4 +-- docs/monty.functools.html | 4 +-- docs/monty.html | 4 +-- docs/monty.inspect.html | 4 +-- docs/monty.io.html | 4 +-- docs/monty.itertools.html | 4 +-- docs/monty.json.html | 7 ++-- docs/monty.logging.html | 4 +-- docs/monty.math.html | 4 +-- docs/monty.msgpack.html | 4 +-- docs/monty.multiprocessing.html | 4 +-- docs/monty.operator.html | 4 +-- docs/monty.os.html | 4 +-- docs/monty.os.path.html | 4 +-- docs/monty.pprint.html | 4 +-- docs/monty.re.html | 4 +-- docs/monty.serialization.html | 11 +++--- docs/monty.shutil.html | 4 +-- docs/monty.string.html | 4 +-- docs/monty.subprocess.html | 4 +-- docs/monty.tempfile.html | 4 +-- docs/monty.termcolor.html | 4 +-- docs/objects.inv | Bin 1903 -> 1902 bytes docs/py-modindex.html | 4 +-- docs/search.html | 4 +-- docs/searchindex.js | 2 +- docs_rst/changelog.rst | 5 +++ monty/__init__.py | 2 +- setup.py | 2 +- 67 files changed, 180 insertions(+), 151 deletions(-) diff --git a/docs/_modules/index.html b/docs/_modules/index.html index 31e9f1eb..496ce7b6 100644 --- a/docs/_modules/index.html +++ b/docs/_modules/index.html @@ -5,7 +5,7 @@ - Overview: module code — monty 2021.6.10 documentation + Overview: module code — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

Navigation

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    • diff --git a/docs/_modules/monty/bisect.html b/docs/_modules/monty/bisect.html index 09d9ff94..1b9242f0 100644 --- a/docs/_modules/monty/bisect.html +++ b/docs/_modules/monty/bisect.html @@ -5,7 +5,7 @@ - monty.bisect — monty 2021.6.10 documentation + monty.bisect — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

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    Navigation

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    • diff --git a/docs/_modules/monty/fnmatch.html b/docs/_modules/monty/fnmatch.html index fa9f497b..8dfa89fb 100644 --- a/docs/_modules/monty/fnmatch.html +++ b/docs/_modules/monty/fnmatch.html @@ -5,7 +5,7 @@ - monty.fnmatch — monty 2021.6.10 documentation + monty.fnmatch — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    Navigation

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    • diff --git a/docs/_modules/monty/itertools.html b/docs/_modules/monty/itertools.html index d5eda2ec..816f952c 100644 --- a/docs/_modules/monty/itertools.html +++ b/docs/_modules/monty/itertools.html @@ -5,7 +5,7 @@ - monty.itertools — monty 2021.6.10 documentation + monty.itertools — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    • diff --git a/docs/_modules/monty/json.html b/docs/_modules/monty/json.html index aa88b273..def622ed 100644 --- a/docs/_modules/monty/json.html +++ b/docs/_modules/monty/json.html @@ -5,7 +5,7 @@ - monty.json — monty 2021.6.10 documentation + monty.json — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

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    • @@ -474,7 +474,7 @@

    Source code for monty.json

         """
    -
    [docs]def jsanitize(obj, strict=False, allow_bson=False): +
    [docs]def jsanitize(obj, strict=False, allow_bson=False, enum_values=False): """ This method cleans an input json-like object, either a list or a dict or some sequence, nested or otherwise, by converting all non-string @@ -493,22 +493,29 @@

    Source code for monty.json

                 encounters an bson supported type such as objectid and datetime. If
             True, such bson types will be ignored, allowing for proper
             insertion into MongoDb databases.
+        enum_values (bool): Convert Enums to their values.
 
     Returns:
         Sanitized dict that can be json serialized.
     """
+    if isinstance(obj, Enum) and enum_values:
+        return obj.value
+
     if allow_bson and (
         isinstance(obj, (datetime.datetime, bytes)) or (bson is not None and isinstance(obj, bson.objectid.ObjectId))
     ):
         return obj
     if isinstance(obj, (list, tuple)):
-        return [jsanitize(i, strict=strict, allow_bson=allow_bson) for i in obj]
+        return [jsanitize(i, strict=strict, allow_bson=allow_bson, enum_values=enum_values) for i in obj]
     if np is not None and isinstance(obj, np.ndarray):
-        return [jsanitize(i, strict=strict, allow_bson=allow_bson) for i in obj.tolist()]
+        return [jsanitize(i, strict=strict, allow_bson=allow_bson, enum_values=enum_values) for i in obj.tolist()]
     if np is not None and isinstance(obj, np.generic):
         return obj.item()
     if isinstance(obj, dict):
-        return {k.__str__(): jsanitize(v, strict=strict, allow_bson=allow_bson) for k, v in obj.items()}
+        return {
+            k.__str__(): jsanitize(v, strict=strict, allow_bson=allow_bson, enum_values=enum_values)
+            for k, v in obj.items()
+        }
     if isinstance(obj, (int, float)):
         return obj
     if obj is None:
@@ -527,9 +534,9 @@ 
    Source code for monty.json
             return obj.__str__()
 
     if pydantic is not None and isinstance(obj, pydantic.BaseModel):
-        return jsanitize(MontyEncoder().default(obj), strict=strict, allow_bson=allow_bson)
+        return jsanitize(MontyEncoder().default(obj), strict=strict, allow_bson=allow_bson, enum_values=enum_values)
 
-    return jsanitize(obj.as_dict(), strict=strict, allow_bson=allow_bson)
    
+    return jsanitize(obj.as_dict(), strict=strict, allow_bson=allow_bson, enum_values=enum_values)
    def _serialize_callable(o): diff --git a/docs/_modules/monty/logging.html b/docs/_modules/monty/logging.html index 4d25b169..9b62ef71 100644 --- a/docs/_modules/monty/logging.html +++ b/docs/_modules/monty/logging.html @@ -5,7 +5,7 @@ - monty.logging — monty 2021.6.10 documentation + monty.logging — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    • diff --git a/docs/_modules/monty/math.html b/docs/_modules/monty/math.html index a5e1ee0a..25e5b6fb 100644 --- a/docs/_modules/monty/math.html +++ b/docs/_modules/monty/math.html @@ -5,7 +5,7 @@ - monty.math — monty 2021.6.10 documentation + monty.math — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    Navigation

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    • diff --git a/docs/_modules/monty/os.html b/docs/_modules/monty/os.html index 3f7127f1..d45439ab 100644 --- a/docs/_modules/monty/os.html +++ b/docs/_modules/monty/os.html @@ -5,7 +5,7 @@ - monty.os — monty 2021.6.10 documentation + monty.os — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    • diff --git a/docs/_modules/monty/os/path.html b/docs/_modules/monty/os/path.html index d621346b..eb3e04db 100644 --- a/docs/_modules/monty/os/path.html +++ b/docs/_modules/monty/os/path.html @@ -5,7 +5,7 @@ - monty.os.path — monty 2021.6.10 documentation + monty.os.path — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    • diff --git a/docs/_modules/monty/pprint.html b/docs/_modules/monty/pprint.html index 6af8058d..7e57ab1c 100644 --- a/docs/_modules/monty/pprint.html +++ b/docs/_modules/monty/pprint.html @@ -5,7 +5,7 @@ - monty.pprint — monty 2021.6.10 documentation + monty.pprint — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    • diff --git a/docs/_modules/monty/re.html b/docs/_modules/monty/re.html index 4714db5d..3adb2807 100644 --- a/docs/_modules/monty/re.html +++ b/docs/_modules/monty/re.html @@ -5,7 +5,7 @@ - monty.re — monty 2021.6.10 documentation + monty.re — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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    • diff --git a/docs/_modules/monty/serialization.html b/docs/_modules/monty/serialization.html index 4b0cc1b2..f75b1e3e 100644 --- a/docs/_modules/monty/serialization.html +++ b/docs/_modules/monty/serialization.html @@ -5,7 +5,7 @@ - monty.serialization — monty 2021.6.10 documentation + monty.serialization — monty 2021.7.8 documentation @@ -31,7 +31,7 @@

    Navigation

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  • Module code »
  • monty.serialization
    • @@ -81,7 +81,7 @@

    Source code for monty.serialization

         msgpack = None
 
 
-
    [docs]def loadfn(fn, *args, **kwargs):
+
    [docs]def loadfn(fn, *args, fmt=None, **kwargs):
     r"""
     Loads json/yaml/msgpack directly from a filename instead of a
     File-like object. File may also be a BZ2 (".BZ2") or GZIP (".GZ", ".Z")
@@ -95,19 +95,23 @@ 
    Source code for monty.serialization
         Args:
         fn (str/Path): filename or pathlib.Path.
         *args: Any of the args supported by json/yaml.load.
+        fmt (string): If specified, the fmt specified would be used instead
+            of autodetection from filename. Supported formats right now are
+            "json", "yaml" or "mpk".
         **kwargs: Any of the kwargs supported by json/yaml.load.
 
     Returns:
         (object) Result of json/yaml/msgpack.load.
     """
 
-    basename = os.path.basename(fn).lower()
-    if ".mpk" in basename:
-        fmt = "mpk"
-    elif any(ext in basename for ext in (".yaml", ".yml")):
-        fmt = "yaml"
-    else:
-        fmt = "json"
+    if fmt is None:
+        basename = os.path.basename(fn).lower()
+        if ".mpk" in basename:
+            fmt = "mpk"
+        elif any(ext in basename for ext in (".yaml", ".yml")):
+            fmt = "yaml"
+        else:
+            fmt = "json"
 
     if fmt == "mpk":
         if msgpack is None:
@@ -132,7 +136,7 @@ 
    Source code for monty.serialization
                 raise TypeError("Invalid format: {}".format(fmt))
    
 
 
-
    [docs]def dumpfn(obj, fn, *args, **kwargs):
+
    [docs]def dumpfn(obj, fn, *args, fmt=None, **kwargs):
     r"""
     Dump to a json/yaml directly by filename instead of a
     File-like object. File may also be a BZ2 (".BZ2") or GZIP (".GZ", ".Z")
@@ -152,13 +156,14 @@ 
    Source code for monty.serialization
         Returns:
         (object) Result of json.load.
     """
-    basename = os.path.basename(fn).lower()
-    if ".mpk" in basename:
-        fmt = "mpk"
-    elif any(ext in basename for ext in (".yaml", ".yml")):
-        fmt = "yaml"
-    else:
-        fmt = "json"
+    if fmt is None:
+        basename = os.path.basename(fn).lower()
+        if ".mpk" in basename:
+            fmt = "mpk"
+        elif any(ext in basename for ext in (".yaml", ".yml")):
+            fmt = "yaml"
+        else:
+            fmt = "json"
 
     if fmt == "mpk":
         if msgpack is None:
diff --git a/docs/_modules/monty/shutil.html b/docs/_modules/monty/shutil.html
index 89167443..b4af14d0 100644
--- a/docs/_modules/monty/shutil.html
+++ b/docs/_modules/monty/shutil.html
@@ -5,7 +5,7 @@
   
     
     
-    monty.shutil — monty 2021.6.10 documentation
+    monty.shutil — monty 2021.7.8 documentation
     
     
     
@@ -31,7 +31,7 @@ 
    Navigation
    
         
  • 
           modules |
    • 
-        
  • monty 2021.6.10 documentation »
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+        
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    •  
       
diff --git a/docs/_modules/monty/string.html b/docs/_modules/monty/string.html
index 113e01b9..ff974dab 100644
--- a/docs/_modules/monty/string.html
+++ b/docs/_modules/monty/string.html
@@ -5,7 +5,7 @@
   
     
     
-    monty.string — monty 2021.6.10 documentation
+    monty.string — monty 2021.7.8 documentation
     
     
     
@@ -31,7 +31,7 @@ 
    Navigation
    
         
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-        
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+        
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diff --git a/docs/_modules/monty/subprocess.html b/docs/_modules/monty/subprocess.html
index feb8e0e9..e7db8381 100644
--- a/docs/_modules/monty/subprocess.html
+++ b/docs/_modules/monty/subprocess.html
@@ -5,7 +5,7 @@
   
     
     
-    monty.subprocess — monty 2021.6.10 documentation
+    monty.subprocess — monty 2021.7.8 documentation
     
     
     
@@ -31,7 +31,7 @@ 
    Navigation
    
         
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-        
  • monty 2021.6.10 documentation »
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+        
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diff --git a/docs/_modules/monty/tempfile.html b/docs/_modules/monty/tempfile.html
index 3baf8f20..2f3f20ba 100644
--- a/docs/_modules/monty/tempfile.html
+++ b/docs/_modules/monty/tempfile.html
@@ -5,7 +5,7 @@
   
     
     
-    monty.tempfile — monty 2021.6.10 documentation
+    monty.tempfile — monty 2021.7.8 documentation
     
     
     
@@ -31,7 +31,7 @@ 
    Navigation
    
         
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+        
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diff --git a/docs/_modules/monty/termcolor.html b/docs/_modules/monty/termcolor.html
index 501832e2..dbf64887 100644
--- a/docs/_modules/monty/termcolor.html
+++ b/docs/_modules/monty/termcolor.html
@@ -5,7 +5,7 @@
   
     
     
-    monty.termcolor — monty 2021.6.10 documentation
+    monty.termcolor — monty 2021.7.8 documentation
     
     
     
@@ -31,7 +31,7 @@ 
    Navigation
    
         
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-        
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+        
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diff --git a/docs/_static/documentation_options.js b/docs/_static/documentation_options.js
index 59a76c74..65db107e 100644
--- a/docs/_static/documentation_options.js
+++ b/docs/_static/documentation_options.js
@@ -1,6 +1,6 @@
 var DOCUMENTATION_OPTIONS = {
     URL_ROOT: document.getElementById("documentation_options").getAttribute('data-url_root'),
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 and yaml.
    
 
    
 
    
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+++ b/docs/py-modindex.html
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-    Python Module Index — monty 2021.6.10 documentation
+    Python Module Index — monty 2021.7.8 documentation
     
     
     
@@ -34,7 +34,7 @@ 
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+        
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Sphinx Style","Change log","Monty: Python Made Even Easier","monty","monty package","monty.bisect module","monty.collections module","monty.design_patterns module","monty.dev module","monty.fnmatch module","monty.fractions module","monty.functools module","monty.inspect module","monty.io module","monty.itertools module","monty.json module","monty.logging module","monty.math module","monty.msgpack module","monty.multiprocessing module","monty.operator module","monty.os package","monty.os.path module","monty.pprint module","monty.re module","monty.serialization module","monty.shutil module","monty.string module","monty.subprocess module","monty.tempfile module","monty.termcolor module"],titleterms:{"0":1,"1":1,"10":1,"2":1,"3":1,"4":1,"5":1,"6":1,"7":1,"8":1,"9":1,api:2,bisect:5,chang:[1,2],collect:6,content:[4,21],contribut:2,design_pattern:7,dev:8,doc:2,easier:2,even:2,fnmatch:9,fraction:10,functool:11,indic:2,inspect:12,instal:2,io:13,itertool:14,json:15,krtheme:0,licens:2,log:[1,2,16],made:2,math:17,modul:[4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30],monti:[2,3,4,5,6,7,8,9,10,11,12,13,14,15,16,17,18,19,20,21,22,23,24,25,26,27,28,29,30],msgpack:18,multiprocess:19,oper:20,os:[21,22],packag:[4,21],path:22,pprint:23,python:2,re:24,serial:25,shutil:26,sphinx:0,string:27,style:0,submodul:[4,21],subpackag:4,subprocess:28,tabl:2,tempfil:29,termcolor:30,usag:2,v0:1,v1:1,v2021:1,v2:1,v3:1,v4:1}}) \ No newline at end of file diff --git a/docs_rst/changelog.rst b/docs_rst/changelog.rst index 214f39ab..fe2fdfc3 100644 --- a/docs_rst/changelog.rst +++ b/docs_rst/changelog.rst @@ -1,6 +1,11 @@ Change log ========== +v2021.7.8 +--------- +* Support the specification of `fmt` keyword arg in monty.serialization + loadfn and dumpfn. + v2021.6.10 ---------- * Expanded support for built-in functions, numpy types, etc. in MSON serialization (@utf). diff --git a/monty/__init__.py b/monty/__init__.py index 5db4d86b..9aedd854 100644 --- a/monty/__init__.py +++ b/monty/__init__.py @@ -7,7 +7,7 @@ __author__ = "Shyue Ping Ong" __copyright__ = "Copyright 2014, The Materials Virtual Lab" -__version__ = "2021.6.10" +__version__ = "2021.7.8" __maintainer__ = "Shyue Ping Ong" __email__ = "ongsp@ucsd.edu" __date__ = "Oct 12 2020" diff --git a/setup.py b/setup.py index 05bd9423..59fd4a95 100644 --- a/setup.py +++ b/setup.py @@ -10,7 +10,7 @@ setup( name="monty", packages=find_packages(), - version="2021.6.10", + version="2021.7.8", extras_require={ "yaml": ["ruamel.yaml"], },