This repository provides the dextromethorphan physiologically based pharmacokinetics (PBPK) model described in
Grzegorzewski J, Brandhorst J, König M. Physiologically based pharmacokinetic (PBPK) modeling of the role of CYP2D6 polymorphism for metabolic phenotyping with dextromethorphan. Front Pharmacol. 2022 Oct 24;13:1029073. doi: https://doi.org/10.3389/fphar.2022.1029073. PMID: 36353484; PMCID: PMC9637881.
The model is distributed as SBML available from dextromethorphan_body_flat.xml with
corresponding SBML4humans model report at https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/matthiaskoenig/dextromethorphan-model/main/models/dextromethorphan_body_flat.xml
The CYP2D6 submodel is available from cyp2d6.xml with corresponding SBML4humans report at
https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/matthiaskoenig/dextromethorphan-model/main/models/cyp2d6.xml
The liver submodel is available from dextromethorphan_liver.xml with corresponding SBML4humans report at
https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/matthiaskoenig/dextromethorphan-model/main/models/dextromethorphan_liver.xml
The kidney submodel is available from dextromethorphan_kidney.xml with corresponding SBML4humans report at
https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/matthiaskoenig/dextromethorphan-model/main/models/dextromethorphan_kidney.xml
The intestine submodel is available from dextromethorphan_intestine.xml with corresponding SBML4humans report at
https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/matthiaskoenig/dextromethorphan-model/main/models/dextromethorphan_intestine.xml
The whole-body submodel is available from dextromethorphan_body.xml with corresponding SBML4humans report at
https://sbml4humans.de/model_url?url=https://raw.githubusercontent.com/matthiaskoenig/dextromethorphan-model/main/models/dextromethorphan_body.xml
Grzegorzewski, Jan, & König, Matthias. (2022). Physiologically based pharmacokinetic (PBPK) model of dextromethorphan (v0.9.5).
Zenodo. https://doi.org/10.5281/zenodo.7025683
- Source Code: LGPLv3
- Documentation: CC BY-SA 4.0
- Models: CC BY-SA 4.0
The dextromethorphan-model source is released under both the GPL and LGPL licenses version 2 or later. You may choose which license you choose to use the software under.
This program is free software: you can redistribute it and/or modify it under the terms of the GNU General Public License or the GNU Lesser General Public License as published by the Free Software Foundation, either version 2 of the License, or (at your option) any later version.
This program is distributed in the hope that it will be useful, but WITHOUT ANY WARRANTY; without even the implied warranty of MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU General Public License for more details.
Jan Grzegorzewski and Matthias König were supported by the Federal Ministry of Education and Research (BMBF, Germany) within the research network Systems Medicine of the Liver (LiSyM, grant number 031L0054) and by the German Research Foundation (DFG) within the Research Unit Programme FOR 5151 QuaLiPerF (Quantifying Liver Perfusion-Function Relationship in Complex Resection - A Systems Medicine Approach) by grant number 436883643.
© 2021-2022 Jan Grzegorzewski & Matthias König, Systems Medicine of the Liver