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- Stanford University
- Bay Area, CA
Smith-Waterman local aligner
Utility methods for dealing with tab-delimited files
Nginx sub-request authorization
Simple dotfiles setup
Minimum viable pipeline runner - early python implementation - don't use...
Simple Job Queue - single node batch job scheduling with resource management - for those times when you'd rather not SLURM
A Java API for high-throughput sequencing data (HTS) formats.
FeatherDB - Java based document database
ETA Progress bar
A quick hello-world servlet to test Java application servers
Python library and utility scripts for submitting jobs to batch schedulers (SGE, PBS, etc...)
lightweight HTTP reverse proxy built on eventlet
Use SQLite to query tab-delimited files
Collaborative Text Editor Powered by Firebase
Homopolymer Truncation tools
Access to Java class from Python !
CouchDB library for Java using JSON
markdown2: A fast and complete implementation of Markdown in Python
PBS web monitor script
Tornado is an open source version of the scalable, non-blocking web server and and tools that power FriendFeed