3,142 contributions in the last year
Opened 18 other pull requests in 4 repositories
Reviewed 22 pull requests in 5 repositories
hubmapconsortium/portal-ui 10 pull requests
- Mobile Menu change
- VItessce 1.1.10 (Bitmask support)
- John conroy/fix bar chart responsiveness
- John conroy/show derived samples for sample tiles
- John conroy/remove support counts from tiles
- John conroy/fix summary date alignment
- John conroy/always show search term
- John conroy/remove support prov
- Restart hubmap-auth for STAGE redeploy
hubmapconsortium/ingest-validation-tools 8 pull requests
vitessce/vitessce-python 2 pull requests
hubmapconsortium/commons 1 pull request
hms-dbmi/gehlenborglab-website 1 pull request
Opened 33 other issues in 6 repositories
- Add cypress testing for /cells
- Use the fast gene expression API
- dev-start not working... pyyaml vesion conflict with commons?
- Allow codex / atac to be searched in cells demo
- Cells demo: implement Boolean search
- Design UI for boolean search
- Cells API: Get all Gene + Protein names ... figure out how to support left substring search
- Facet group header still shown, even when there are no facets underneat
- homepage barchart key goes off-screen at narrow widths
- Gene names not being collected correctly
widget_from_dict.ipynb: Scatterplots not rendering
webbrowser.open(url)instead of just printing URLs?
FutureWarning: Moving element from .uns['neighbors']['distances'] to .obsp['distances'].
Is there a suggested order to explore
docs/notebooks/? Perhaps not...
docs/notebooks/factor out shared data download steps into separate notebook? Or
docs/notebooks/separate data directories for separate examples?
- Link from docs to github?
Confused about multiple
environment.yaml: Are both needed?
description_mdto spell out acronyms, where needed
- --schema_dir CLI flag
- cze -> ce
Failed to establish a new connection
- assay_category: "Follow up with Chuck and see if it is even useful any longer"
- Hide some paths in directory schema?
- Update lightsheet description to say what changed
- Deprecate nanoDESI ... first case of deprecation