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  • TwoPaCo

    A fast constructor of the compressed de Bruijn graph from many genomes

    bioinformatics graph-algorithms comparative-genomics de-bruijn-graphs
    C++ 25 8 Updated Sep 5, 2018

  • internal

    Updated Aug 20, 2018

  • vargeno

    Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.

    bioinformatics snps algorithms computational-biology data-structures genotyping
    C++ 13 MIT Updated Aug 14, 2018

  • vargeno_lite

    Memory Lite version of VarGeno

    C++ Updated Aug 13, 2018

  • bloomtree-allsome

    Forked from Kingsford-Group/bloomtree

    Sequence Bloom Trees with All/Some split

    C++ 10 12 GPL-3.0 Updated Jul 11, 2018

  • SbtPlayData

    Very small examples for testing Sequence Bloom Trees and similar data structures

    Updated May 17, 2018

  • varmatch

    robust matching of small variant datasets using flexible scoring schemes

    C++ 10 6 Apache-2.0 Updated Jan 26, 2018

  • refpluspipeline

    Java 1 3 Updated May 25, 2017

  • bioinformatics_submission_guides

    Bioinformatics Journal Guides

    Updated Nov 21, 2016

  • cnfind

    C++ 1 2 Updated May 31, 2015

  • isvda

    iterative small variant detecting algorithm

    Python 1 1 Updated May 23, 2015

  • test

    This is an empty repository for the purposes of figuring out how github works

    Updated Mar 7, 2014
    • 1

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