• A fast constructor of the compressed de Bruijn graph from many genomes

    C++ 25 8 Updated Sep 5, 2018
  • Updated Aug 20, 2018
  • Towards fast and accurate SNP genotyping from whole genome sequencing data for bedside diagnostics.

    C++ 13 MIT Updated Aug 14, 2018
  • Memory Lite version of VarGeno

    C++ Updated Aug 13, 2018
  • Sequence Bloom Trees with All/Some split

    C++ 10 12 GPL-3.0 Updated Jul 11, 2018
  • Very small examples for testing Sequence Bloom Trees and similar data structures

    Updated May 17, 2018
  • robust matching of small variant datasets using flexible scoring schemes

    C++ 10 6 Apache-2.0 Updated Jan 26, 2018
  • Java 1 3 Updated May 25, 2017
  • Bioinformatics Journal Guides

    Updated Nov 21, 2016
  • C++ 1 2 Updated May 31, 2015
  • iterative small variant detecting algorithm

    Python 1 1 Updated May 23, 2015
  • This is an empty repository for the purposes of figuring out how github works

    Updated Mar 7, 2014