diff --git a/hwg_gssr_scripts/findSSRs_post_assembly.pl b/hwg_gssr_scripts/findSSRs_fasta.pl
similarity index 100%
rename from hwg_gssr_scripts/findSSRs_post_assembly.pl
rename to hwg_gssr_scripts/findSSRs_fasta.pl
diff --git a/hwg_gssr_scripts/findSSRs.pl b/hwg_gssr_scripts/findSSRs_fastq.pl
similarity index 100%
rename from hwg_gssr_scripts/findSSRs.pl
rename to hwg_gssr_scripts/findSSRs_fastq.pl