Last little bug - now correctly calculating number of repeats

mestato · b70790183a1166b081f092b603a53cf0db396c19 · mestato committed Jul 8, 2015 · Jul 8, 2015 · b707901
1 parent fa6abaf
commit b70790183a1166b081f092b603a53cf0db396c19
Unified Split

Showing with 1 addition and 1 deletion.

+1 −1 hwg_gssr_scripts/findSSRs_post_assembly.pl
diff --git a/hwg_gssr_scripts/findSSRs_post_assembly.pl b/hwg_gssr_scripts/findSSRs_post_assembly.pl
@@ -391,7 +391,7 @@ sub process_ssr{
 	##-------------------------------------
 	## generate a few more stats and variables
 	my $motif_len = length $motif;
-	my $num_of_repeats = ($end_index-$start_index+1)/$motif_len;
+	my $num_of_repeats = ($end_index-$start_index)/$motif_len;
     my $ssr_id = $contig_name."_ssr".$start_index;
 
 	##-------------------------------------