diff --git a/.classpath b/.classpath
index 9a16531..79dbc60 100644
--- a/.classpath
+++ b/.classpath
@@ -3,5 +3,56 @@
+
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diff --git a/src/edu/isi/mavuno/app/util/ExamplesToSequenceFile.java b/src/edu/isi/mavuno/app/util/ExamplesToSequenceFile.java
index 490de11..75802c6 100644
--- a/src/edu/isi/mavuno/app/util/ExamplesToSequenceFile.java
+++ b/src/edu/isi/mavuno/app/util/ExamplesToSequenceFile.java
@@ -1,11 +1,11 @@
/*
* Mavuno: A Hadoop-Based Text Mining Toolkit
- *
+ *
* Licensed under the Apache License, Version 2.0 (the "License"); you
* may not use this file except in compliance with the License. You may
* obtain a copy of the License at
*
- * http://www.apache.org/licenses/LICENSE-2.0
+ * http://www.apache.org/licenses/LICENSE-2.0
*
* Unless required by applicable law or agreed to in writing, software
* distributed under the License is distributed on an "AS IS" BASIS,
@@ -93,6 +93,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("ExamplesToSequenceFile");
+ job.setJarByClass(ExamplesToSequenceFile.class);
FileInputFormat.addInputPath(job, new Path(contextPath));
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/app/util/SequenceFileToText.java b/src/edu/isi/mavuno/app/util/SequenceFileToText.java
index ff3f98b..9472e77 100644
--- a/src/edu/isi/mavuno/app/util/SequenceFileToText.java
+++ b/src/edu/isi/mavuno/app/util/SequenceFileToText.java
@@ -81,6 +81,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("SequenceFileToText");
+ job.setJarByClass(SequenceFileToText.class);
FileInputFormat.addInputPath(job, new Path(inputPath));
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/extract/CombineGlobalStats.java b/src/edu/isi/mavuno/extract/CombineGlobalStats.java
index 8a9b075..5026824 100644
--- a/src/edu/isi/mavuno/extract/CombineGlobalStats.java
+++ b/src/edu/isi/mavuno/extract/CombineGlobalStats.java
@@ -92,6 +92,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("CombineGlobalStats");
+ job.setJarByClass(CombineGlobalStats.class);
for(int split = 0; split < numSplits; split++) {
FileInputFormat.addInputPath(job, new Path(inputPath + "/" + split));
diff --git a/src/edu/isi/mavuno/extract/CombineSplits.java b/src/edu/isi/mavuno/extract/CombineSplits.java
index 6fd3752..b733ca7 100644
--- a/src/edu/isi/mavuno/extract/CombineSplits.java
+++ b/src/edu/isi/mavuno/extract/CombineSplits.java
@@ -156,6 +156,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("CombineSplits");
+ job.setJarByClass(CombineSplits.class);
for(int split = 0; split < numSplits; split++) {
FileInputFormat.addInputPath(job, new Path(examplesPath + "/" + split));
diff --git a/src/edu/isi/mavuno/extract/Extract.java b/src/edu/isi/mavuno/extract/Extract.java
index e8ce6c0..40307a3 100644
--- a/src/edu/isi/mavuno/extract/Extract.java
+++ b/src/edu/isi/mavuno/extract/Extract.java
@@ -316,7 +316,7 @@ public int run(String[] args) throws ClassNotFoundException, InterruptedExceptio
return run();
}
- @SuppressWarnings({ "unchecked", "rawtypes" })
+ @SuppressWarnings("unchecked")
public int run() throws ClassNotFoundException, InterruptedException, IOException {
Configuration conf = getConf();
@@ -341,6 +341,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("Extract");
+ job.setJarByClass(Extract.class);
MavunoUtils.recursivelyAddInputPaths(job, corpusPath);
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/extract/ExtractGlobalStats.java b/src/edu/isi/mavuno/extract/ExtractGlobalStats.java
index f72c442..3692e7a 100644
--- a/src/edu/isi/mavuno/extract/ExtractGlobalStats.java
+++ b/src/edu/isi/mavuno/extract/ExtractGlobalStats.java
@@ -270,7 +270,7 @@ public int run(String[] args) throws ClassNotFoundException, InterruptedExceptio
return run();
}
- @SuppressWarnings({ "unchecked", "rawtypes" })
+ @SuppressWarnings("unchecked")
public int run() throws ClassNotFoundException, InterruptedException, IOException {
Configuration conf = getConf();
@@ -311,6 +311,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("ExtractGlobalStats");
+ job.setJarByClass(ExtractGlobalStats.class);
MavunoUtils.recursivelyAddInputPaths(job, corpusPath);
FileOutputFormat.setOutputPath(job, new Path(outputPath + "/../split/" + split));
diff --git a/src/edu/isi/mavuno/extract/Split.java b/src/edu/isi/mavuno/extract/Split.java
index c4c585d..e0a79f0 100644
--- a/src/edu/isi/mavuno/extract/Split.java
+++ b/src/edu/isi/mavuno/extract/Split.java
@@ -184,6 +184,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("Split");
+ job.setJarByClass(Split.class);
MavunoUtils.recursivelyAddInputPaths(job, inputPath);
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/score/CombineScores.java b/src/edu/isi/mavuno/score/CombineScores.java
index af93d67..282b40e 100644
--- a/src/edu/isi/mavuno/score/CombineScores.java
+++ b/src/edu/isi/mavuno/score/CombineScores.java
@@ -112,6 +112,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("CombineScores");
+ job.setJarByClass(CombineScores.class);
MavunoUtils.recursivelyAddInputPaths(job, inputPath);
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/score/GetTopResults.java b/src/edu/isi/mavuno/score/GetTopResults.java
index 301da48..92e77e0 100644
--- a/src/edu/isi/mavuno/score/GetTopResults.java
+++ b/src/edu/isi/mavuno/score/GetTopResults.java
@@ -170,6 +170,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("GetTopResults");
+ job.setJarByClass(GetTopResults.class);
FileInputFormat.addInputPath(job, new Path(inputPath));
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/score/ScoreContexts.java b/src/edu/isi/mavuno/score/ScoreContexts.java
index 2b72235..78582b2 100644
--- a/src/edu/isi/mavuno/score/ScoreContexts.java
+++ b/src/edu/isi/mavuno/score/ScoreContexts.java
@@ -205,6 +205,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("ScoreContexts");
+ job.setJarByClass(ScoreContexts.class);
FileInputFormat.addInputPath(job, new Path(inputPath));
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/score/ScorePatterns.java b/src/edu/isi/mavuno/score/ScorePatterns.java
index dba1005..ec9c057 100644
--- a/src/edu/isi/mavuno/score/ScorePatterns.java
+++ b/src/edu/isi/mavuno/score/ScorePatterns.java
@@ -205,6 +205,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("ScorePatterns");
+ job.setJarByClass(ScorePatterns.class);
FileInputFormat.addInputPath(job, new Path(inputPath));
FileOutputFormat.setOutputPath(job, new Path(outputPath));
diff --git a/src/edu/isi/mavuno/score/UpdateWeights.java b/src/edu/isi/mavuno/score/UpdateWeights.java
index c5f2c27..dd0cf0a 100644
--- a/src/edu/isi/mavuno/score/UpdateWeights.java
+++ b/src/edu/isi/mavuno/score/UpdateWeights.java
@@ -150,6 +150,7 @@ public int run() throws ClassNotFoundException, InterruptedException, IOExceptio
Job job = new Job(conf);
job.setJobName("UpdateWeights");
+ job.setJarByClass(UpdateWeights.class);
FileInputFormat.addInputPath(job, new Path(statsPath));
FileInputFormat.addInputPath(job, new Path(scoresPath));