Cptac binomial debugging #141
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…tance-MS into cptac-binomial_debugging
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@scottdtaylor95 fixed a couple lintings in your |
aarmey
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May 6, 2020
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@mcreixell looks good. On a separate branch, I think it might be helpful to put everything PAM250-related into a separate pam250.py, and likewise for binomial calculations.
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Ok, sounds good. |
scottdtaylor95
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May 7, 2020
aarmey
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Jan 26, 2022
* binomial fix. * organizing function in sequence_analysis.py by sequence method. * more. * more cleaning. * .predict() fix. * phenotypes PCA plot. * update requirements.txt * . * linting. * redefine weight variable. Co-authored-by: marcc <creixell@ucla.edu> Former-commit-id: 7d0368b
aarmey
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Jan 26, 2022
* binomial fix. * organizing function in sequence_analysis.py by sequence method. * more. * more cleaning. * .predict() fix. * phenotypes PCA plot. * update requirements.txt * . * linting. * redefine weight variable. Co-authored-by: marcc <creixell@ucla.edu> Former-commit-id: 7d0368b Former-commit-id: d9d9673
aarmey
pushed a commit
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Jan 26, 2022
* binomial fix. * organizing function in sequence_analysis.py by sequence method. * more. * more cleaning. * .predict() fix. * phenotypes PCA plot. * update requirements.txt * . * linting. * redefine weight variable. Co-authored-by: marcc <creixell@ucla.edu> Former-commit-id: d828c45b1892c711f4b2e3198745de12cc62d8d3 [formerly 51f4dc3291f981e6715f97e532a57ec4d41aa572] [formerly 7d0368b] Former-commit-id: d9d9673 Former-commit-id: 4b5e160 Former-commit-id: 3bc413a8357c9cbe39d416b01518983dc2efc199
aarmey
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Jan 19, 2024
* binomial fix. * organizing function in sequence_analysis.py by sequence method. * more. * more cleaning. * .predict() fix. * phenotypes PCA plot. * update requirements.txt * . * linting. * redefine weight variable. Co-authored-by: marcc <creixell@ucla.edu> Former-commit-id: d828c45b1892c711f4b2e3198745de12cc62d8d3 [formerly 51f4dc3291f981e6715f97e532a57ec4d41aa572] [formerly 4b5e160 [formerly d9d9673] [formerly 7d0368b]] Former-commit-id: 4b5e160 [formerly d9d9673] Former-commit-id: 4b5e160 Former-commit-id: 3bc413a8357c9cbe39d416b01518983dc2efc199 Former-commit-id: d7b61a2 Former-commit-id: 8a428960576bb286e3f45fd30dba42b05e75b341
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This includes:
sequence_analysis.py.predict()