An R Shiny app to cluster genotypes within a population
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README.md

shiny-cluster-genotypes

shiny-cluster-genotypes is an R Shiny app to cluster samples based on their genotype data across a set of markers. It creates and displays MDS, tree, and tile plots.

Both a functional version of the app and sample data files are available. One sample file is tab-delimited and the other is comma-separated. In the file named sample-data.snps.txt, both N and U represent NA values. Therefore, enter the following into the field for NA strings: N,U.