lobSTR: a short tandem repeat profiler for next generation sequencing data
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config build: Attempt at automatic coverage reports. Mar 10, 2014
experimental Use innate __doc__ and chmod +x on python scripts. Oct 29, 2014
m4 maint: update copyright years to 2014 Oct 18, 2014
models adding new model files. Will probably remake these using more data. K… Sep 6, 2014
scripts Updating filter vcf script to handle edge cases Jul 1, 2016
src Updating filter vcf script to handle edge cases Jul 1, 2016
tests using interval trees Dec 6, 2014
.gitignore using interval trees to get spanned intervals Dec 5, 2014
.travis.yml enabling werror for travis build Oct 8, 2014
AUTHORS updating web pages, making version 2.0.4 Feb 27, 2014
COPYING starting git repository Oct 3, 2011
ChangeLog updating changelog for v2.0.4 Mar 6, 2014
HACKING.md updating mac osx prerequisites Oct 9, 2014
INSTALL starting git repository Oct 3, 2011
Makefile.am maint: update copyright years to 2014 Oct 18, 2014
NEWS fixed chr_random bugs Jan 22, 2012
README Update README Oct 10, 2014
configure.ac maint: update copyright years to 2014 Oct 18, 2014
lobSTR.rb Update lobSTR.rb Jan 14, 2014
make_bin_dist.sh getting rid of -j default option for make scripts since it kills my d… Dec 28, 2014
make_src_dist.sh getting rid of -j default option for make scripts since it kills my d… Dec 28, 2014
reconf Move shebang to first line in reconf. Oct 29, 2014
set_new_tag_version.sh build: uncomment 'git push --tags' in version script. Mar 5, 2014
update_travis_mac.sh maint: add script to auto generate Travis-CI config for Mac-OS-X Sep 6, 2014
wishlist.txt added tag to annotate reads spanning more than 1 STR Sep 6, 2014

README

For full documentation, see the lobSTR website: http://lobstr.teamerlich.org/