Description
Generate a plot like this:
from a file that looks like this:
https://github.com/miRTop/mirtop/blob/master/data/examples/plot/example_count.tsv
Libraries to use:
The code can be added as a script under scripts folder where a function get a file with a similar content that the previous one. The function should generate a similar figure than the example.
After a function like that is implemented, the next step is to integrate in command line:
A new option in stats subcommand like --plot should generate a plot showing the difference between GFF files.
For instance, in this example:
cd mirtop/data
mirtop stats -o test_out example/gff/correct_file.gff
if we add --plot it should output the previous figure.
For that, it has to be implemented code at https://github.com/miRTop/mirtop/blob/dev/mirtop/gff/stats.py#L29.
The output of that function contains *_count and *_sum category. There should be a plot for each of that.