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dsNickFury is for comparing a CRISPR target site against all other potential sites in a genome. Orchid is a package I'm developing to go with it for iterative CRISPR analysis over an exome.
This program is designed to look for potential off-target hits by any Cas9-Crispr type of system, including ones from alternate species with different PAM sites. This program requires python3 and a…
Updated version, now gives structured indexed genomes for much faster searching.
Forked from hak5/bashbunny-payloads
Payloads for the Hak5 Bash Bunny
This program can take a tab-delimited text file containing bam file paths and loci and create a subdirectory of image captures for you.
Forked from igvteam/igv
Integrative Genomics Viewer. Fast, efficient, scalable visualization tool for genomics data and annotations