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A Swiss army knife for genome projects
Survey of bioinformatics field
Example of how bioinformatics experiments can be organised using object relational mapping, rake files, and data validations
Query NCBI pubmed at the command line using ruby and boson.
Forked from next-gs/scaffolder-tools
Set of tools for manipulating sequence assemblies specified by yaml configuration files.
Various configuration files
1,427 contributions in the last year
Aaron, I'd like to make your image compatible with the rest of the images on bioboxes. I've made some changes, mainly to convert the biobox.yaml in…
Abyss appears to struggle with read orientation when processing multiple displacement amplification data (i.e. single cell)
I've been benchmarking abyss on single cell data and got the following error:
abyss-map -j2 -l40 reads.fq.gz genome-3.fa \ |abyss-fixmate -l40 -h g…