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Reorganise plotting scripts

Signed-off-by: Michael Barton <mail@michaelbarton.me.uk>
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commit 4dbe57431c2647c1608e70b300ba025c1e2997fc 1 parent 103eeb7
Michael Barton authored
1  .gitignore
@@ -2,4 +2,5 @@
2 2 *.csv
3 3 *.gp
4 4 *.xz
  5 +*.tab
5 6 genomes
8 Makefile
... ... @@ -1,9 +1,9 @@
1 1 all: gene_density.eps dotplot.eps growth.eps
2 2
3   -growth.eps: bin/plot_growth growth_data.csv
  3 +growth.eps: plot/growth growth_data.csv
4 4 $^ $@
5 5
6   -dotplot.eps: bin/dotplot synteny.tab
  6 +dotplot.eps: plot/dotplot synteny.tab
7 7 $^ $@
8 8
9 9 synteny.tab: bin/align genomes/.fasta
@@ -18,7 +18,7 @@ genomes/.fasta: bin/fasta genomes/.decompressed
18 18 ls $(dir $(lastword $^))**/**/genome.gb | parallel $<
19 19 touch $@
20 20
21   -gene_density.eps: bin/plot_gene_density gene_count.csv
  21 +gene_density.eps: plot/gene_density gene_count.csv
22 22 $^ $@
23 23
24 24 gene_count.csv: bin/count genomes/.decompressed
@@ -35,4 +35,4 @@ genomes.tar.xz:
35 35 s3cmd get s3://com-cavescience-r124-manuscript/$@
36 36
37 37 clean:
38   - rm -rf genomes/ *.csv *.eps
  38 + rm -rf genomes/ *.csv *.eps *.tab
0  bin/dotplot → plot/dotplot
File renamed without changes
0  bin/plot_gene_density → plot/gene_density
File renamed without changes
0  bin/plot_growth → plot/growth
File renamed without changes
4,955 synteny.tab
0 additions, 4,955 deletions not shown

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