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Merge pull request #43 from OnToologyUser/master

OnToology update
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micheldumontier committed Apr 12, 2018
2 parents e8231fe + e52b945 commit e2cae5ef1737a182c6ca8b451f35d689171c2c83
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@@ -13,7 +13,7 @@
<http://semanticscience.org/ontology/sio.owl> <http://purl.org/vocab/vann/preferredNamespaceUri> "http://semanticscience.org/resource/" .
<http://semanticscience.org/ontology/sio.owl> <http://schema.org/comment> "general class inclusion axioms:\n'is part of' some 'physical entity' subClassOf 'is located in' some 'physical entity'\n\nrole chains:\n'has capability' o 'is realized in' -> 'is participant in'" .
<http://semanticscience.org/ontology/sio.owl> <http://www.w3.org/2000/01/rdf-schema#seeAlso> "http://sio.semanticscience.org"^^<http://www.w3.org/2001/XMLSchema#anyURI> .
<http://semanticscience.org/ontology/sio.owl> <http://www.w3.org/2002/07/owl#versionInfo> "1.42.2" .
<http://semanticscience.org/ontology/sio.owl> <http://www.w3.org/2002/07/owl#versionInfo> "1.43" .
#
#
# #################################################################
@@ -312,6 +312,7 @@
<http://semanticscience.org/resource/SIO_000203> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#SymmetricProperty> .
<http://semanticscience.org/resource/SIO_000203> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#TransitiveProperty> .
<http://semanticscience.org/resource/SIO_000203> <http://purl.org/dc/terms/description> "A is connected to B iff there exists a fiat, material or temporal path between A and B. [S][T]"@en .
<http://semanticscience.org/resource/SIO_000203> <http://semanticscience.org/resource/hasSynonym> "interacts with"@en .
<http://semanticscience.org/resource/SIO_000203> <http://semanticscience.org/resource/subset> "core" .
<http://semanticscience.org/resource/SIO_000203> <http://semanticscience.org/resource/subset> "nlp" .
<http://semanticscience.org/resource/SIO_000203> <http://www.w3.org/2000/01/rdf-schema#label> "is connected to"@en .
@@ -1638,6 +1639,30 @@ _:genid9 <http://www.w3.org/1999/02/22-rdf-syntax-ns#rest> <http://www.w3.org/19
<http://semanticscience.org/resource/SIO_001280> <http://purl.org/dc/terms/description> "is phenotype of is a relation between an observable/measurable characteristic and an object." .
<http://semanticscience.org/resource/SIO_001280> <http://www.w3.org/2000/01/rdf-schema#label> "is phenotype of"@en .
#
# http://semanticscience.org/resource/SIO_001401
<http://semanticscience.org/resource/SIO_001401> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#ObjectProperty> .
<http://semanticscience.org/resource/SIO_001401> <http://www.w3.org/2000/01/rdf-schema#subPropertyOf> <http://semanticscience.org/resource/SIO_001154> .
<http://semanticscience.org/resource/SIO_001401> <http://purl.org/dc/elements/1.1/description> "x positively regulates y if and only if x is a process and y is either a process or a quality, and the progression of x exerts an effect that increases the frequency, rate or extent of y"@en .
<http://semanticscience.org/resource/SIO_001401> <http://www.w3.org/2000/01/rdf-schema#label> "positively regulates"@en .
#
# http://semanticscience.org/resource/SIO_001402
<http://semanticscience.org/resource/SIO_001402> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#ObjectProperty> .
<http://semanticscience.org/resource/SIO_001402> <http://www.w3.org/2000/01/rdf-schema#subPropertyOf> <http://semanticscience.org/resource/SIO_001154> .
<http://semanticscience.org/resource/SIO_001402> <http://purl.org/dc/elements/1.1/description> "x negatively regulates y if and only if x is a process and y is either a process or a quality, and the progression of x exerts an reduced effect on the frequency, rate or extent of y"@en .
<http://semanticscience.org/resource/SIO_001402> <http://www.w3.org/2000/01/rdf-schema#label> "negatively regulates"@en .
#
# http://semanticscience.org/resource/SIO_001403
<http://semanticscience.org/resource/SIO_001403> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#ObjectProperty> .
<http://semanticscience.org/resource/SIO_001403> <http://www.w3.org/2000/01/rdf-schema#subPropertyOf> <http://semanticscience.org/resource/SIO_000001> .
<http://semanticscience.org/resource/SIO_001403> <http://purl.org/dc/elements/1.1/description> "x is associated with y when x and y are logically or statistically related to one another."@en .
<http://semanticscience.org/resource/SIO_001403> <http://www.w3.org/2000/01/rdf-schema#label> "is associated with"@en .
#
# http://semanticscience.org/resource/SIO_001404
<http://semanticscience.org/resource/SIO_001404> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#ObjectProperty> .
<http://semanticscience.org/resource/SIO_001404> <http://www.w3.org/2000/01/rdf-schema#subPropertyOf> <http://semanticscience.org/resource/SIO_001403> .
<http://semanticscience.org/resource/SIO_001404> <http://purl.org/dc/elements/1.1/description> "x is correlated with y when x holds a statistical relationship with y"@en .
<http://semanticscience.org/resource/SIO_001404> <http://www.w3.org/2000/01/rdf-schema#label> "is correlated with"@en .
#
# http://semanticscience.org/resource/SIO_010078
<http://semanticscience.org/resource/SIO_010078> <http://www.w3.org/1999/02/22-rdf-syntax-ns#type> <http://www.w3.org/2002/07/owl#ObjectProperty> .
<http://semanticscience.org/resource/SIO_010078> <http://www.w3.org/2000/01/rdf-schema#subPropertyOf> <http://semanticscience.org/resource/SIO_000338> .
@@ -64,7 +64,7 @@ mailing list: http://groups.google.com/group/sio-ontology
role chains:
'has capability' o 'is realized in' -> 'is participant in'"""^^xsd:string ;
rdfs:seeAlso "http://sio.semanticscience.org"^^xsd:anyURI ;
owl:versionInfo "1.42.2"^^xsd:string .
owl:versionInfo "1.43"^^xsd:string .
#################################################################
# Annotation properties
@@ -403,6 +403,7 @@ role chains:
rdf:type owl:SymmetricProperty ,
owl:TransitiveProperty ;
<http://purl.org/dc/terms/description> "A is connected to B iff there exists a fiat, material or temporal path between A and B. [S][T]"@en ;
<http://semanticscience.org/resource/hasSynonym> "interacts with"@en ;
<http://semanticscience.org/resource/subset> "core"^^xsd:string ,
"nlp"^^xsd:string ;
rdfs:label "is connected to"@en .
@@ -1893,6 +1894,34 @@ role chains:
rdfs:label "is phenotype of"@en .
### http://semanticscience.org/resource/SIO_001401
<http://semanticscience.org/resource/SIO_001401> rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf <http://semanticscience.org/resource/SIO_001154> ;
<http://purl.org/dc/elements/1.1/description> "x positively regulates y if and only if x is a process and y is either a process or a quality, and the progression of x exerts an effect that increases the frequency, rate or extent of y"@en ;
rdfs:label "positively regulates"@en .
### http://semanticscience.org/resource/SIO_001402
<http://semanticscience.org/resource/SIO_001402> rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf <http://semanticscience.org/resource/SIO_001154> ;
<http://purl.org/dc/elements/1.1/description> "x negatively regulates y if and only if x is a process and y is either a process or a quality, and the progression of x exerts an reduced effect on the frequency, rate or extent of y"@en ;
rdfs:label "negatively regulates"@en .
### http://semanticscience.org/resource/SIO_001403
<http://semanticscience.org/resource/SIO_001403> rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf <http://semanticscience.org/resource/SIO_000001> ;
<http://purl.org/dc/elements/1.1/description> "x is associated with y when x and y are logically or statistically related to one another."@en ;
rdfs:label "is associated with"@en .
### http://semanticscience.org/resource/SIO_001404
<http://semanticscience.org/resource/SIO_001404> rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf <http://semanticscience.org/resource/SIO_001403> ;
<http://purl.org/dc/elements/1.1/description> "x is correlated with y when x holds a statistical relationship with y"@en ;
rdfs:label "is correlated with"@en .
### http://semanticscience.org/resource/SIO_010078
<http://semanticscience.org/resource/SIO_010078> rdf:type owl:ObjectProperty ;
rdfs:subPropertyOf <http://semanticscience.org/resource/SIO_000338> ;
@@ -72,7 +72,7 @@ mailing list: http://groups.google.com/group/sio-ontology
role chains:
&apos;has capability&apos; o &apos;is realized in&apos; -&gt; &apos;is participant in&apos;</schema:comment>
<rdfs:seeAlso rdf:datatype="http://www.w3.org/2001/XMLSchema#anyURI">http://sio.semanticscience.org</rdfs:seeAlso>
<owl:versionInfo rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.42.2</owl:versionInfo>
<owl:versionInfo rdf:datatype="http://www.w3.org/2001/XMLSchema#string">1.43</owl:versionInfo>
</owl:Ontology>
@@ -603,6 +603,7 @@ role chains:
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#SymmetricProperty"/>
<rdf:type rdf:resource="http://www.w3.org/2002/07/owl#TransitiveProperty"/>
<terms:description xml:lang="en">A is connected to B iff there exists a fiat, material or temporal path between A and B. [S][T]</terms:description>
<resource:hasSynonym xml:lang="en">interacts with</resource:hasSynonym>
<resource:subset rdf:datatype="http://www.w3.org/2001/XMLSchema#string">core</resource:subset>
<resource:subset rdf:datatype="http://www.w3.org/2001/XMLSchema#string">nlp</resource:subset>
<rdfs:label xml:lang="en">is connected to</rdfs:label>
@@ -2802,6 +2803,50 @@ role chains:
<!-- http://semanticscience.org/resource/SIO_001401 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_001401">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_001154"/>
<dc:description xml:lang="en">x positively regulates y if and only if x is a process and y is either a process or a quality, and the progression of x exerts an effect that increases the frequency, rate or extent of y</dc:description>
<rdfs:label xml:lang="en">positively regulates</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_001402 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_001402">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_001154"/>
<dc:description xml:lang="en">x negatively regulates y if and only if x is a process and y is either a process or a quality, and the progression of x exerts an reduced effect on the frequency, rate or extent of y</dc:description>
<rdfs:label xml:lang="en">negatively regulates</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_001403 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_001403">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_000001"/>
<dc:description xml:lang="en">x is associated with y when x and y are logically or statistically related to one another.</dc:description>
<rdfs:label xml:lang="en">is associated with</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_001404 -->
<owl:ObjectProperty rdf:about="http://semanticscience.org/resource/SIO_001404">
<rdfs:subPropertyOf rdf:resource="http://semanticscience.org/resource/SIO_001403"/>
<dc:description xml:lang="en">x is correlated with y when x holds a statistical relationship with y</dc:description>
<rdfs:label xml:lang="en">is correlated with</rdfs:label>
</owl:ObjectProperty>
<!-- http://semanticscience.org/resource/SIO_010078 -->
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