v1.10.0

What's Changed

• Implement notebook that migrates Mongo database from "legacy" to "Berkeley" schema by @eecavanna in #553
• Missing attribute "qualitycontrolreport" causing multiple NEON tests to fail by @aclum in #660
• Remove test code's dependence on a static Mongo dump by @eecavanna in #664
• Add indexes to alldocs collection for has_input and has_output keys/slots by @sujaypatil96 in #674

Full Changelog: v1.9.0...v1.10.0

Release 2024.8

What's Changed

• feat: refactor notebook and supporting code by @dwinston in #609
• fix: changesheet can update bytes-ranged slot by @dwinston in #614
• Add broker name to NCBI XML, and also pull in protocol_link.name from LibraryPreparation objects by @sujaypatil96 in #612
• be more conservative with builtins by @dwinston in #619
• Make <DataType> in NCBI XML SRA <Action> block more specific by @sujaypatil96 in #618
• not all schema collections suffix with _sets by @dwinston in #620
• hotfix: op fails due to invalid helper method invocation by @dwinston in #633
• feat: test coverage for apply_metadata_in job by @dwinston in #635
• reimplement /data_objects/study/{study_id} using alldocs by @sujaypatil96 in #608
• Update nmdc-schema to v10.8.0 by @aclum in #645
• Add funding source to SubmissionPortalTranslator by @JamesTessmer in #627

New Contributors

• @JamesTessmer made their first contribution in #627

Full Changelog: v1.8.0...v1.9.0

Release 2024.7

What's Changed

• Add GHA workflow that deploys app to nmdc-berkeley Spin namespace by @eecavanna in #583
• update requirements for main by @PeopleMakeCulture in #585
• Materialize mongo alldocs collection by @dwinston in #550
• Upgrade to nmdc-schema 10.6.0 by @pkalita-lbl in #603
• Updates to SRA <Action> blocks in NCBI XML by @sujaypatil96 in #601
• Upgrade to nmdc-schema 10.7.0 by @pkalita-lbl in #610
• doc: clarify that user must be site admin to generate site credentials by @dwinston in #607

Full Changelog: v1.7.0...v1.8.0

Release 2024.6

What's Changed

• Configure CORS to allow requests from clients hosted on GitHub Pages by @eecavanna in #533
• [Clean-up] Remove references to terminusdb by @PeopleMakeCulture in #542
• Implement API endpoint that returns name of collection containing document having a given id by @eecavanna in #532
• Implement migration notebook for v10.3.0 to v10.4.0 by @eecavanna in #558
• Bump migration notebooks' pymongo dependency to accommodate nmdc-schema by @eecavanna in #562
• Configure GitHub Actions to push container image to GitHub Container Registry (in addition to Docker Hub) by @eecavanna in #565
• Authenticate as workflow triggerer instead of as repo owner by @eecavanna in #566
• Bump nmdc-schema from 10.3.0 to 10.5.5 by @eecavanna in #560
• Update NmdcPortalApiClient with new authentication scheme by @pkalita-lbl in #572
• Code for NMDC to NCBI export by @sujaypatil96 in #518
• Update notebook to use revised migrator (via newer nmdc-schema PyPI package) by @eecavanna in #574

Full Changelog: v1.6.0...v1.7.0

Release 2024.5

What's Changed

• Pipeline to ingest data from NEON surface water data product by @sujaypatil96 in #430
• Update analytics middleware to log requests lacking a user-agent header by @eecavanna in #516
• Upgrade to nmdc-schema 10.3.0 by @pkalita-lbl in #525

Full Changelog: v1.5.0...v1.6.0

Release 2024.4

What's Changed

• fix: remove unused file by @dwinston in #500
• Upgrade to nmdc-schema 10.2.0 by @pkalita-lbl in #505
• load optional info banner via env var by @dwinston in #507

Full Changelog: v1.4.2...v1.5.0

Release 2024.3

What's Changed

• update docs for changesheet validator to include remove action by @PeopleMakeCulture in #499

Full Changelog: v1.4.1...v1.4.2

Release 2024.2.1

What's Changed

• feat: point to schema root by @dwinston in #485
• Bump nmdc-schema from 10.0.0 to 10.1.0 by @aclum in #486
• Migrations: Implement bookkeeping by @eecavanna in #487
• Upgrade to nmdc-schema 10.1.2 by @pkalita-lbl in #491
• Migrations: Fix invalid example notebook by @eecavanna in #492
• feat(style): use nmdc favicon by @dwinston in #493
• Upgrade to nmdc-schema 10.1.4 by @pkalita-lbl in #494
• fix(validation): allow any valid nmdc:Database to [/v1]/workflows/activities by @dwinston in #497

New Contributors

• @aclum made their first contribution in #486

Full Changelog: v1.4.0...v1.4.1

Release 2024.2

• Use HTTP status code 4xx instead of 500 for more types of authentication errors by @dwinston in 7d0dad9

Full Changelog: v1.3.1...v1.4.0

v1.3.1

What's Changed

• Fix inaccurate comment in migration instructions by @eecavanna in #465
• 301-skip-pytest-failures by @PeopleMakeCulture in #463
• feat: pull request template by @dwinston in #473
• 478 refactor v1 workflows activities endpoint by @PeopleMakeCulture in #479

Full Changelog: v1.3.0...v1.3.1