diff --git a/Jakefile.js b/Jakefile.js
index 4641df7f7b4a0..09958c48cde1c 100644
--- a/Jakefile.js
+++ b/Jakefile.js
@@ -700,7 +700,7 @@ task("generate-spec", [specMd]);
 // Makes a new LKG. This target does not build anything, but errors if not all the outputs are present in the built/local directory
 desc("Makes a new LKG out of the built js files");
 task("LKG", ["clean", "release", "local"].concat(libraryTargets), function () {
-    var expectedFiles = [tscFile, servicesFile, serverFile, nodePackageFile, nodeDefinitionsFile, standaloneDefinitionsFile, tsserverLibraryFile, tsserverLibraryDefinitionFile].concat(libraryTargets);
+    var expectedFiles = [tscFile, servicesFile, serverFile, nodePackageFile, nodeDefinitionsFile, standaloneDefinitionsFile, tsserverLibraryFile, tsserverLibraryDefinitionFile, cancellationTokenFile, typingsInstallerFile].concat(libraryTargets);
     var missingFiles = expectedFiles.filter(function (f) {
         return !fs.existsSync(f);
     });
diff --git a/src/harness/unittests/typingsInstaller.ts b/src/harness/unittests/typingsInstaller.ts
index 9dd1247c8972e..117ca65cb64ca 100644
--- a/src/harness/unittests/typingsInstaller.ts
+++ b/src/harness/unittests/typingsInstaller.ts
@@ -627,5 +627,97 @@ namespace ts.projectSystem {
             checkProjectActualFiles(p1, [lodashJs.path, commanderJs.path, file3.path, commander.path, jquery.path, lodash.path, cordova.path]);
             checkProjectActualFiles(p2, [file3.path, grunt.path, gulp.path ]);
         });
+
+        it("configured projects discover from node_modules", () => {
+            const app = {
+                path: "/app.js",
+                content: ""
+            };
+            const jsconfig = {
+                path: "/jsconfig.json",
+                content: JSON.stringify({})
+            };
+            const jquery = {
+                path: "/node_modules/jquery/index.js",
+                content: ""
+            };
+            const jqueryPackage = {
+                path: "/node_modules/jquery/package.json",
+                content: JSON.stringify({ name: "jquery" })
+            };
+            const jqueryDTS = {
+                path: "/tmp/node_modules/@types/jquery/index.d.ts",
+                content: ""
+            };
+            const host = createServerHost([app, jsconfig, jquery, jqueryPackage]);
+            const installer = new (class extends Installer {
+                constructor() {
+                    super(host, { globalTypingsCacheLocation: "/tmp" });
+                }
+                runCommand(requestKind: TI.RequestKind, requestId: number, command: string, cwd: string, cb: server.typingsInstaller.RequestCompletedAction) {
+                    const installedTypings = ["@types/jquery"];
+                    const typingFiles = [jqueryDTS];
+                    executeCommand(this, host, installedTypings, typingFiles, requestKind, cb);
+                }
+            })();
+
+            const projectService = createProjectService(host, { useSingleInferredProject: true, typingsInstaller: installer });
+            projectService.openClientFile(app.path);
+
+            checkNumberOfProjects(projectService, { configuredProjects: 1 });
+            const p = projectService.configuredProjects[0];
+            checkProjectActualFiles(p, [app.path]);
+
+            installer.installAll([TI.NpmViewRequest], [TI.NpmInstallRequest]);
+
+            checkNumberOfProjects(projectService, { configuredProjects: 1 });
+            checkProjectActualFiles(p, [app.path, jqueryDTS.path]);
+        });
+
+        it("configured projects discover from bower.josn", () => {
+            const app = {
+                path: "/app.js",
+                content: ""
+            };
+            const jsconfig = {
+                path: "/jsconfig.json",
+                content: JSON.stringify({})
+            };
+            const bowerJson = {
+                path: "/bower.json",
+                content: JSON.stringify({
+                        "dependencies": {
+                            "jquery": "^3.1.0"
+                        }
+                    })
+            };
+            const jqueryDTS = {
+                path: "/tmp/node_modules/@types/jquery/index.d.ts",
+                content: ""
+            };
+            const host = createServerHost([app, jsconfig, bowerJson]);
+            const installer = new (class extends Installer {
+                constructor() {
+                    super(host, { globalTypingsCacheLocation: "/tmp" });
+                }
+                runCommand(requestKind: TI.RequestKind, requestId: number, command: string, cwd: string, cb: server.typingsInstaller.RequestCompletedAction) {
+                    const installedTypings = ["@types/jquery"];
+                    const typingFiles = [jqueryDTS];
+                    executeCommand(this, host, installedTypings, typingFiles, requestKind, cb);
+                }
+            })();
+
+            const projectService = createProjectService(host, { useSingleInferredProject: true, typingsInstaller: installer });
+            projectService.openClientFile(app.path);
+
+            checkNumberOfProjects(projectService, { configuredProjects: 1 });
+            const p = projectService.configuredProjects[0];
+            checkProjectActualFiles(p, [app.path]);
+
+            installer.installAll([TI.NpmViewRequest], [TI.NpmInstallRequest]);
+
+            checkNumberOfProjects(projectService, { configuredProjects: 1 });
+            checkProjectActualFiles(p, [app.path, jqueryDTS.path]);
+        });
     });
 }
\ No newline at end of file
diff --git a/src/server/typingsInstaller/nodeTypingsInstaller.ts b/src/server/typingsInstaller/nodeTypingsInstaller.ts
index 7df1e9a78776f..b73a8e4e79db3 100644
--- a/src/server/typingsInstaller/nodeTypingsInstaller.ts
+++ b/src/server/typingsInstaller/nodeTypingsInstaller.ts
@@ -9,6 +9,7 @@ namespace ts.server.typingsInstaller {
     const path: {
         join(...parts: string[]): string;
         dirname(path: string): string;
+        basename(path: string, extension?: string): string;
     } = require("path");
 
     class FileLog implements Log {
@@ -23,6 +24,15 @@ namespace ts.server.typingsInstaller {
         }
     }
 
+    function getNPMLocation(processName: string) {
+        if (path.basename(processName).indexOf("node") == 0) {
+            return `"${path.join(path.dirname(process.argv[0]), "npm")}"`;
+        }
+        else {
+            return "npm";
+        }
+    }
+
     export class NodeTypingsInstaller extends TypingsInstaller {
         private readonly exec: { (command: string, options: { cwd: string }, callback?: (error: Error, stdout: string, stderr: string) => void): any };
 
@@ -31,7 +41,7 @@ namespace ts.server.typingsInstaller {
         constructor(globalTypingsCacheLocation: string, throttleLimit: number, log: Log) {
             super(
                 globalTypingsCacheLocation,
-                /*npmPath*/ `"${path.join(path.dirname(process.argv[0]), "npm")}"`,
+                /*npmPath*/ getNPMLocation(process.argv[0]),
                 toPath("typingSafeList.json", __dirname, createGetCanonicalFileName(sys.useCaseSensitiveFileNames)),
                 throttleLimit,
                 log);
diff --git a/src/server/typingsInstaller/typingsInstaller.ts b/src/server/typingsInstaller/typingsInstaller.ts
index 1113e6e2701dd..5437328b581bf 100644
--- a/src/server/typingsInstaller/typingsInstaller.ts
+++ b/src/server/typingsInstaller/typingsInstaller.ts
@@ -150,7 +150,7 @@ namespace ts.server.typingsInstaller {
             if (this.installTypingHost.fileExists(packageJson)) {
                 const npmConfig = <NpmConfig>JSON.parse(this.installTypingHost.readFile(packageJson));
                 if (this.log.isEnabled()) {
-                    this.log.writeLine(`Loaded content of '${npmConfig}': ${JSON.stringify(npmConfig)}`);
+                    this.log.writeLine(`Loaded content of '${packageJson}': ${JSON.stringify(npmConfig)}`);
                 }
                 if (npmConfig.devDependencies) {
                     for (const key in npmConfig.devDependencies) {
diff --git a/src/server/utilities.ts b/src/server/utilities.ts
index a7a0160ea62d1..69962fa186ea8 100644
--- a/src/server/utilities.ts
+++ b/src/server/utilities.ts
@@ -35,7 +35,7 @@ namespace ts.server {
     function getProjectRootPath(project: Project): Path {
         switch (project.projectKind) {
             case ProjectKind.Configured:
-                return <Path>project.getProjectName();
+                return <Path>getDirectoryPath(project.getProjectName());
             case ProjectKind.Inferred:
                 // TODO: fixme
                 return <Path>"";
diff --git a/src/services/jsTyping.ts b/src/services/jsTyping.ts
index 32670c738fa04..d50e26c61941b 100644
--- a/src/services/jsTyping.ts
+++ b/src/services/jsTyping.ts
@@ -187,7 +187,7 @@ namespace ts.JsTyping {
             }
 
             const typingNames: string[] = [];
-            const fileNames = host.readDirectory(nodeModulesPath, ["*.json"], /*excludes*/ undefined, /*includes*/ undefined, /*depth*/ 2);
+            const fileNames = host.readDirectory(nodeModulesPath, [".json"], /*excludes*/ undefined, /*includes*/ undefined, /*depth*/ 2);
             for (const fileName of fileNames) {
                 const normalizedFileName = normalizePath(fileName);
                 if (getBaseFileName(normalizedFileName) !== "package.json") {