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Exception in VDJCHit#getIdentity #345

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dbolotin opened this Issue Feb 10, 2018 · 0 comments

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dbolotin commented Feb 10, 2018

Discovered in -cBestIdentityPercent in exportClones:

Exception in thread "main" java.lang.NullPointerException
	at com.milaboratory.mixcr.basictypes.VDJCHit.getIdentity(VDJCHit.java:128)
	at com.milaboratory.mixcr.export.FieldExtractors$29.extract(FieldExtractors.java:555)
	at com.milaboratory.mixcr.export.FieldExtractors$29.extract(FieldExtractors.java:549)
	at com.milaboratory.mixcr.export.FieldParameterless$1.extractValue(FieldParameterless.java:60)
	at com.milaboratory.mixcr.export.InfoWriter.put(InfoWriter.java:82)
	at com.milaboratory.mixcr.cli.ActionExportClones$ExportClones.run(ActionExportClones.java:151)
	at com.milaboratory.mixcr.cli.ActionExportClones.go0(ActionExportClones.java:76)
	at com.milaboratory.mixcr.cli.ActionExport.go(ActionExport.java:52)
	at com.milaboratory.cli.JCommanderBasedMain.main(JCommanderBasedMain.java:155)
	at com.milaboratory.mixcr.cli.Main.main(Main.java:115)

@dbolotin dbolotin added the bug label Feb 10, 2018

@dbolotin dbolotin added this to the 2.1.10 milestone Feb 10, 2018

@dbolotin dbolotin closed this Feb 10, 2018

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