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Acycle: Time-series analysis software for paleoclimate research and education
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Acycle is a time-series analysis software for paleoclimate research and education

Highlights

  • A fully implemented graphical user interface (GUI) facilitates operator use
  • Acycle runs either in the MATLAB environment or as a stand-alone application on Mac and Windows

Please cite

Wiki: Table of Content

What they say

James Ogg
  • Dr. James G. Ogg (Professor, Purdue University, USA):

    "His Acycle software will become the standard tool for time-scale applications by all international workers."

JF Read
  • Dr. J. Fred Read (Emeritus Professor of Sedimentary Geology, Virginia Tech):

    "It is truly an amazing contribution to the geosciences community. As someone who has spent much of the last 50 years trying to understand cyclic carbonates on shallow platforms, and having been involved with my students in some of the early work on stratigraphic modelling of the effects of Milankovitch forcing of carbonate platform stratigraphy, I was blown away by the power of the Acycle software. ... You should all feel very proud of this contribution. It opens up much needed access to these powerful tools for a wide audience in the sedimentary geology and paleoclimate community. Thanks again for all your efforts. A really marvellous job."

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Has been used in

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Contact

MingsongLi.com
Mingsong Li, Penn State. Oct. 20, 2019
E-mail: mul450 {at} psu.edu; limingsonglms {at} gmail.com

Website: https://mingsongli.com/

Google Scholar ResearchGate linkedin GitHub Mingsong Li wiki



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Abstract

  • Acycle is a comprehensive, but "user-friendly" software package for analysis of time-series designed for paleoclimate research and education.
  • Acycle runs either in the MATLAB environment or as a stand-alone application on Mac and Windows.
  • It is an open-source package and is available free of charge.
    • Acycle provides data preparation tools, detrending procedures with multiple options available to track or remove secular trends, and integrates various power spectral analysis approaches for detection and tracking of periodic signals.

    • Acycle also provides a toolbox that evaluates astronomical signals in paleoclimate series, and estimates the most likely sedimentation rate by maximizing the correlation coefficient between power spectra of an astronomical solution and a paleoclimate series.

    • Sedimentary noise models for sea-level variations are also included.

    • Many of the functions are specific to cyclostratigraphy and astrochronology, and are not found in standard, statistical packages.

gui

Acycle Graphical User Interface (GUI)

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Acycle menu

Acycle insolation toolbox

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Mean insolation map from March 21 to Sept. 23 for the past 100 kyr (1-100) at 50-80°N using the Laskar et al. (2004) solutions. The calculate uses a solar constant of 1365 w/m^2.

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Evolutionary FFT of the astronomical solution.

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Detrending GUI and results

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2π multi-taper method power spectrum of the gamma ray series is shown with 20% median-smoothed spectrum, background AR(1) model, and 90%, 95%, 99%, and 99.9% confidence levels.

Read More and example


Wiki: Table of Content

1. Copyright
2. References

3. Getting Started

4. Graphical User Interface

Frequently Asked Questions

Acknowledgements


What they say

JF Read
  • Dr. J. Fred Read (Emeritus Professor of Sedimentary Geology, Dept of Geosciences, Virginia Tech)

    I am writing to express my appreciation for all the hard work and thought that has gone into the development of the Acycle software program. It is truly an amazing contribution to the geosciences community. As someone who has spent much of the last 50 years trying to understand cyclic carbonates on shallow platforms, and having been involved with my students in some of the early work on stratigraphic modelling of the effects of Milankovitch forcing of carbonate platform stratigraphy, I was blown away by the power of the Acycle software.

    In the old days we used in house programs from our geophysicist Cahit Coruh, and recently I have used Analyseries, kSpectra and Timefrq43, moving from Dos to Windows to Mac, jumping from one to the other to get the job done. Acycle has done away with the need for this, and I have been impressed with how very user friendly the program is – an indication of the tremendous effort and thought that has gone into putting this together.

    You should all feel very proud of this contribution. It opens up much needed access to these powerful tools for a wide audience in the sedimentary geology and paleoclimate community. Thanks again for all your efforts. A really marvellous job.

James Ogg
  • Dr. James Ogg (Professor, DEPT. EARTH, ATMOS. & PLANET. SCI., Purdue University, USA):

    "Mingsong Li's Acycle software enables us to quickly analyze the potential of new outcrops and boreholes, and then to determine the sedimentation rates and elapsed time. His Acycle software will become the standard tool for time-scale applications by all international workers."

Paul Olsen
  • Dr. Paul E. Olsen (Professor of Earth and Environmental Sciences, Columbia University; Member, National Academy of Sciences of the USA):

    Not only is this software powerful and effective, it is also simple to use and therefore benefits researchers and at all levels within the paleoclimatology community, from novices to experts.

  • Dr. Arsenio Muñoz Jiménez (Department of Earth Sciences, University of Zaragoza, Spain):

    "Thank you very much and congratulations for the acycle software. I am using it and it is very very useful and interesting."

  • Dr. Marco Franceschi (Professor, Department of Geosciences, University of Padova, Italy):

    Dr. Li’s software is being immensely valuable to my work. Some of the stratigraphic series I am studying display a prominent cyclicity, but were deposited in contexts characterized by relevant changes in sedimentation rates and often lack accurate geochronological constraints. Acycle has been designed specifically for dealing with similar cases, by tackling them with a rigorous statistical approach, and therefore is providing an invaluable tool for their investigation.

  • Dr. Xu Yao (School of Earth Sciences, Lanzhou University, China):

    I am working on cyclostratigraphy and paleoclimate study of ancient strata and rocks (270 million years ago) with assistance from Acycle software. I also introduced this software to my colleagues whose research areas are paleoclimate implications of Quaternary loess (several thousand years ago). My colleagues have given me really good feedbacks about Acycle software.

  • Dr. Christian Zeeden (IMCCE, Observatoire de Paris, France):

    Dr. Li’s software is novel and valuable in this context, especially because it facilitates the easy application of otherwise complex calculations.

  • Dr. Nicolas R. Thibault (University of Copenhagen, Denmark):

    "I’ve been playing a lot with the excellent Acycle package for Matlab that Mingsong developed. Congratulations, this is a very nice interface that simplifies a lot our work and makes it truly faster to analyse a time-series."


Acycle has been used in

  • 1. Li, M., Hinnov, L.A., Huang, C., Ogg, J.G., 2018. Sedimentary noise and sea levels linked to land–ocean water exchange and obliquity forcing. Nature communications 9, 1004. https://doi.org/10.1038/s41467-018-03454-y

  • 2. Li, M., Kump, L.R., Hinnov, L.A., Mann, M.E., 2018. Tracking variable sedimentation rates and astronomical forcing in Phanerozoic paleoclimate proxy series with evolutionary correlation coefficients and hypothesis testing. Earth and Planetary Science Letters 501, 165-179. https://doi.org/10.1016/j.epsl.2018.08.041

  • 3. Chen, G., Gang, W., Liu, Y., Wang, N., Guo, Y., Zhu, C., Cao, Q., 2019. High-resolution sediment accumulation rate determined by cyclostratigraphy and its impact on the organic matter abundance of the hydrocarbon source rock in the Yanchang Formation, Ordos Basin, China. Marine and Petroleum Geology 103, 1-11. https://doi.org/10.1016/j.marpetgeo.2019.01.044

  • 4. Li, M., Huang, C., Ogg, J., Zhang, Y., Hinnov, L., Wu, H., Chen, Z.-Q., Zou, Z., 2019. Paleoclimate proxies for cyclostratigraphy: Comparative analysis using a Lower Triassic marine section in South China. Earth-Science Reviews. https://doi.org/10.1016/j.earscirev.2019.01.011

  • 5. Shi, J., Jin, Z., Liu, Q., Zhang, R., Huang, Z., 2019. Cyclostratigraphy and astronomical tuning of the middle eocene terrestrial successions in the Bohai Bay Basin, Eastern China. Global and Planetary Change 174, 115-126. https://doi.org/10.1016/j.gloplacha.2019.01.001

  • 6. Lu, Y., Huang, C., Jiang, S., Zhang, J., Lu, Y., Liu, Y., 2019. Cyclic late Katian through Hirnantian glacioeustasy and its control of the development of the organic-rich Wufeng and Longmaxi shales, South China. Palaeogeography, Palaeoclimatology, Palaeoecology. https://doi.org/10.1016/j.palaeo.2019.04.012

  • 7. Zhang, Y., Yi, L., Ogg, J.G., 2019. Pliocene-Pleistocene magneto-cyclostratigraphy of IODP Site U1499 and implications for climate-driven sedimentation in the northern South China Sea. Palaeogeography, Palaeoclimatology, Palaeoecology. https://doi.org/10.1016/j.palaeo.2019.04.030

  • 8. Zhang, R., Jin, Z., Liu, Q., Li, P., Huang, Z., Shi, J., Ge, Y., Du, K., 2019. Astronomical constraints on deposition of the Middle Triassic Chang 7 lacustrine shales in the Ordos Basin, Central China. Palaeogeography, Palaeoclimatology, Palaeoecology. https://doi.org/10.1016/j.palaeo.2019.04.030

  • 9. Zhao, K., Du, X., Lu, Y., Xiong, S., Wang, Y., 2019. Are light-dark coupled laminae in lacustrine shale seasonally controlled? A case study using astronomical tuning from 42.2 to 45.4 Ma in the Dongying Depression, Bohai Bay Basin, eastern China. Palaeogeography, Palaeoclimatology, Palaeoecology 528, 35-49. https://doi.org/10.1016/j.palaeo.2019.04.034

  • 10. Zhang, R., Li, L., Nai, W., Gu, Y., Huang, C., Ogg, J., Li, Q., Lu, C. and Wang, Z., 2019. Astronomical forcing of terrestrial climate recorded in the Pleistocene of the western Tarim Basin, NW China. Palaeogeography, Palaeoclimatology, Palaeoecology.

  • 11. Xu, K., Chen, H., Huang, C., Ogg, J.G., Zhu, J., Lin, S., Yang, D., Zhao, P. and Kong, L., 2019. Astronomical time scale of the Paleogene lacustrine paleoclimate record from the Nanxiang Basin, central China. Palaeogeography, Palaeoclimatology, Palaeoecology, 532, p.109253.

  • 12. ZHONG, Y., CHEN, D., FAN, J., WU, H., FANG, Q. and SHI, M., 2019. Cyclostratigraphic Calibration of the Upper Ordovician (Sandbian–Katian) Pagoda and Linhsiang Formations in the Yichang Area, South China. Acta Geologica Sinica‐English Edition, 93(S3), pp.177-180.

  • 13. Su, Q., Nie, J., Luo, Z., Li, M., Heermance, R. and Garzione, C., 2019. Detection of Strong Precession Cycles from the Late Pliocene Sedimentary Records of Northeastern Tibetan Plateau. Geochemistry, Geophysics, Geosystems.

  • 14. Oehlert, A.M. and Swart, P.K., Rolling Window Regression of δ13C and δ18O Values in Carbonate Sediments: Implications for Source and Diagenesis. The Depositional Record.


Read more

  /doc/AC_Users_Guide.pdf

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