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Put the CDK version discussed in this paper in a variable for quick c…
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johnmay committed Aug 27, 2016
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8 changes: 5 additions & 3 deletions article.tex
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%%%%%%%%%%%%%%%%%%%%%%%%%%%% RESEARCH PAPER %%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%%

\def \cdkversion {\textbf{2.0}}

\begin{document}

%%% Start of article front matter
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\subsubsection*{Stereochemistry}

In previous versions of the API, stereochemistry was represented disparately hindering
interconversion between and within file formats. In CDK 1.5.x the core representation
interconversion between and within file formats. In CDK \cdkversion{} the core representation
has been standardized upon and procedures updated or added to enable duplicate checking,
pattern matching, and interconversion.

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and link nodes. For backwards compatibility V2000 is often preferred resulting
in limited usage of V3000.

CDK \textbf{2.0} adds support for V3000 and has optimized and extended
CDK \cdkversion{} adds support for V3000 and has optimized and extended
support for V2000. Currently these are considered separate formats requiring
a user to know what version is being read beforehand. Future APIs will aim
to simplify this and provide a unified reader. An overview of currently
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CTfile Sgroups capture and organise high level information about sets of atoms
and bonds~\cite{Gushurst91}. There are four types of Sgroup: Display Shortcuts, Polymers,
Mixtures, and Data. The most familiar Sgroups from an end user perspective are structure
repeat units (e.g. bracketing) and abbreviations (Figure~8\label{fig:sgroups}). CDK \textbf{2.0} adds
repeat units (e.g. bracketing) and abbreviations (Figure~8\label{fig:sgroups}). CDK \cdkversion{} adds
supports for representation, reading, writing, and depiction.

% note, I pie chart would be cool, showing the various relative amounts of the
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