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Commits on Mar 23, 2012
  1. Preferring get_all_tags() and get_tag_values() over all_tags() and ea…

    fangly committed Mar 23, 2012
    …ch_tag_value() in SeqFeatures for consistency + compliance with SeqFeatureI + indentation cleaning
Commits on Mar 14, 2012
  1. remove module, no longer needed due to Graph version bump

    Chris Fields committed Mar 14, 2012
Commits on Mar 13, 2012
  1. add some documentation indicating change

    Chris Fields committed Mar 13, 2012
  2. require Graph >= 0.5

    Chris Fields committed Mar 13, 2012
  3. silence subroutine warning from redefinition

    Chris Fields committed Mar 13, 2012
Commits on Mar 9, 2012
Commits on Mar 7, 2012
  1. Sane deprecation

    fangly committed Mar 7, 2012
  2. Removed tabs

    fangly committed Mar 7, 2012
Commits on Mar 6, 2012
  1. Better return non-compiled regexp so that it is easier to manipulate …

    fangly committed Mar 6, 2012
    …downstream, e.g. with Bio::Tools::SeqPatterns
Commits on Mar 5, 2012
  1. Formatting

    fangly committed Mar 5, 2012
  2. SeqFeature::Annotated tests

    fangly committed Mar 5, 2012
  3. Gene gets its own test file too

    fangly committed Mar 5, 2012
  4. Updated method names to follow Bio::SeqFeature::Generic convention an…

    fangly committed Mar 5, 2012
    …d provided aliasess
  5. For SeqFeatureI compliance, Bio::SeqFeature::Generic primary_tag(), s…

    fangly committed Mar 5, 2012
    …ource_tag() and display_name() methods must return a string, not undef
  6. Tiny change

    fangly committed Mar 5, 2012
Commits on Mar 3, 2012
  1. Fix for Debian bug #661793, reported by and solved by Olivier Sallou …

    fangly committed Mar 3, 2012
    …<olivier.sallou@irisa.fr>
  2. IUPAC doc update

    fangly committed Mar 3, 2012
Commits on Mar 2, 2012
  1. POD harmonization

    fangly committed Mar 2, 2012
  2. Bio::RangeI is redundant because Bio::SeqFeatureI and Bio::LocationI …

    fangly committed Mar 2, 2012
    …already inherit from Bio::RangeI
Commits on Mar 1, 2012
  1. Reversing previous commit because of the complications associated wit…

    fangly committed Mar 1, 2012
    …h recommending Bio::DB::Sam