ODE.h

/*
 *	Copyright (c) 2015 University of Lübeck
 *
 *	Permission is hereby granted, free of charge, to any person obtaining a copy
 *	of this software and associated documentation files (the "Software"), to deal
 *	in the Software without restriction, including without limitation the rights
 *	to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
 *	copies of the Software, and to permit persons to whom the Software is
 *	furnished to do so, subject to the following conditions:
 *
 *	The above copyright notice and this permission notice shall be included in
 *	all copies or substantial portions of the Software.
 *
 *	THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
 *	IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
 *	FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
 *	AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
 *	LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
 *	OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN
 *	THE SOFTWARE.
 *
 *	AUTHORS:	Michael Schellenberger Costa: mschellenbergercosta@gmail.com
 *
 *	Based on:	A thalamocortical neural mass model of the EEG during NREM sleep and its response
 *				to auditory stimulation.
 *				M Schellenberger Costa, A Weigenand, H-VV Ngo, L Marshall, J Born, T Martinetz,
 *				JC Claussen.
 *				PLoS Computational Biology http://dx.doi.org/10.1371/journal.pcbi.1005022
 */

/******************************************************************************/
/*                        Functions for SRK iteration                         */
/******************************************************************************/
#pragma once
#include "Cortical_Column.h"
#include "Thalamic_Column.h"

void ODE(Cortical_Column& Cortex, Thalamic_Column& Thalamus) {
    /* First calculate every ith RK moment. Has to be in order, 1th moment first */
    for (unsigned i=0; i<4; ++i) {
        Cortex.set_RK(i);
        Thalamus.set_RK(i);
    }

    /* Add all moments */
    Cortex.add_RK();
    Thalamus.add_RK();
}