From 70b18091120e300731f03122360d3c3a0cbe161c Mon Sep 17 00:00:00 2001 From: Michael Schellenberger Costa Date: Sat, 1 Apr 2017 19:27:50 +0200 Subject: [PATCH] Create README.md --- README.md | 9 +++++++++ 1 file changed, 9 insertions(+) create mode 100644 README.md diff --git a/README.md b/README.md new file mode 100644 index 0000000..d898c67 --- /dev/null +++ b/README.md @@ -0,0 +1,9 @@ +#NM_TC + +This repository contains the reference implementation of the model proposed in Schellenberger Costa and Weigenand et al. 2016, available here http://journals.plos.org/ploscompbiol/article?id=10.1371/journal.pcbi.1005022 + +For convenience we utilize MATLAB for data processing and plotting. Therefore the simulation comes with an additional source-file Thalamus_mex.cpp that can be compiled within MATLAB to utilize their C++-mex interface. + +The easiest way to reproduce the figures in the paper is to simply run the Create_Data() function in the "Figures" folder within MATLAB, assuming the mex interface is set up. Afterwards simply run the respective plot functions for the different figures. + +Please note that due to the stochastic nature of the simulation the time series will differ.