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Added parameters for 58mammals. Uses same matrices as 29 mammals but …
…tree for the 58 placental mammals subset of hg38.100way.commonNames.nh (two names were changed to remove special characters: Star-nosed_mole -> Star_nosed_mole; David's_myotis -> Davids_myotis).
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| +( | ||
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| + ( | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + Human:0.00655, | ||
| + Chimp:0.00684 | ||
| + ):0.00422, | ||
| + Gorilla:0.008964 | ||
| + ):0.009693, | ||
| + Orangutan:0.01894 | ||
| + ):0.003471, | ||
| + Gibbon:0.02227 | ||
| + ):0.01204, | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + Rhesus:0.004991, | ||
| + Crab_eating_macaque:0.004991 | ||
| + ):0.003, | ||
| + Baboon:0.008042 | ||
| + ):0.01061, | ||
| + Green_monkey:0.027 | ||
| + ):0.025 | ||
| + ):0.02183, | ||
| + ( | ||
| + Marmoset:0.03, | ||
| + Squirrel_monkey:0.01035 | ||
| + ):0.01965 | ||
| + ):0.07261, | ||
| + Bushbaby:0.13992 | ||
| + ):0.013494, | ||
| + Chinese_tree_shrew:0.174937 | ||
| + ):0.002, | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + Squirrel:0.125468, | ||
| + ( | ||
| + Lesser_Egyptian_jerboa:0.1, | ||
| + ( | ||
| + ( | ||
| + Prairie_vole:0.08, | ||
| + ( | ||
| + Chinese_hamster:0.04, | ||
| + Golden_hamster:0.04 | ||
| + ):0.04 | ||
| + ):0.06, | ||
| + ( | ||
| + Mouse:0.084509, | ||
| + Rat:0.091589 | ||
| + ):0.047773 | ||
| + ):0.06015 | ||
| + ):0.1 | ||
| + ):0.022992, | ||
| + ( | ||
| + Naked_mole_rat:0.1, | ||
| + ( | ||
| + Guinea_pig:0.065629, | ||
| + ( | ||
| + Chinchilla:0.06, | ||
| + Brush_tailed_rat:0.1 | ||
| + ):0.06 | ||
| + ):0.05 | ||
| + ):0.06015 | ||
| + ):0.025746, | ||
| + ( | ||
| + Rabbit:0.114227, | ||
| + Pika:0.201069 | ||
| + ):0.101463 | ||
| + ):0.015313 | ||
| + ):0.020593, | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + Pig:0.12, | ||
| + ( | ||
| + ( | ||
| + Alpaca:0.047275, | ||
| + Wild_bactrian_camel:0.04 | ||
| + ):0.04, | ||
| + ( | ||
| + ( | ||
| + Dolphin:0.034688, | ||
| + Killer_whale:0.039688 | ||
| + ):0.03, | ||
| + ( | ||
| + Tibetan_antelope:0.1, | ||
| + ( | ||
| + Cow:0.1, | ||
| + ( | ||
| + Sheep:0.05, | ||
| + Domestic_goat:0.05 | ||
| + ):0.05 | ||
| + ):0.01 | ||
| + ):0.013592 | ||
| + ):0.025153 | ||
| + ):0.020335 | ||
| + ):0.02, | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + Horse:0.059397, | ||
| + White_rhinoceros:0.025 | ||
| + ):0.05, | ||
| + ( | ||
| + Cat:0.098612, | ||
| + ( | ||
| + Dog:0.052458, | ||
| + ( | ||
| + Ferret:0.05, | ||
| + ( | ||
| + Panda:0.02, | ||
| + ( | ||
| + Pacific_walrus:0.02, | ||
| + Weddell_seal:0.02 | ||
| + ):0.02 | ||
| + ):0.03 | ||
| + ):0.03 | ||
| + ):0.02 | ||
| + ):0.049845 | ||
| + ):0.006219, | ||
| + ( | ||
| + ( | ||
| + Black_flying_fox:0.05, | ||
| + Megabat:0.063399 | ||
| + ):0.05, | ||
| + ( | ||
| + Big_brown_bat:0.02, | ||
| + ( | ||
| + Davids_myotis:0.04, | ||
| + Microbat:0.04254 | ||
| + ):0.05 | ||
| + ):0.06 | ||
| + ):0.033706 | ||
| + ):0.004508 | ||
| + ):0.011671, | ||
| + ( | ||
| + Hedgehog:0.221785, | ||
| + ( | ||
| + Shrew:0.169562, | ||
| + Star_nosed_mole:0.1 | ||
| + ):0.1 | ||
| + ):0.056393 | ||
| + ):0.021227 | ||
| + ):0.023664, | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + ( | ||
| + Elephant:0.002242, | ||
| + Cape_elephant_shrew:0.05 | ||
| + ):0.04699, | ||
| + Manatee:0.1 | ||
| + ):0.049697, | ||
| + ( | ||
| + Cape_golden_mole:0.03, | ||
| + Tenrec:0.235936 | ||
| + ):0.01 | ||
| + ):0.03, | ||
| + Aardvark:0.03 | ||
| + ):0.02, | ||
| + Armadillo:0.169809 | ||
| + ):0.006717 | ||
| +); |
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