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Latest commit c5cb773 Jan 17, 2015 @mlin modernize ocamlbuild commands (3.12+)
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CamlPaml.mlpack rename CamlPaml.Infer -> CamlPaml.PhyloLik Sep 6, 2010
CamlPaml.odocl rename CamlPaml.Infer -> CamlPaml.PhyloLik Sep 6, 2010
Code.ml reorganize directories and clean up build infrastructure Sep 3, 2010
Code.mli reorganize directories and clean up build infrastructure Sep 3, 2010
Expr.ml reorganize directories and clean up build infrastructure Sep 3, 2010
Expr.mli reorganize directories and clean up build infrastructure Sep 3, 2010
Fit.ml Change over to gsl-ocaml Dec 25, 2012
Fit.mli CamlPaml: PhyloModel.P14n checks variable domains; correction to Fit.… Feb 7, 2011
META reorganize directories and clean up build infrastructure Sep 3, 2010
Makefile modernize ocamlbuild commands (3.12+) Jan 18, 2015
Newick.ml reorganize directories and clean up build infrastructure Sep 3, 2010
Newick.mli CamlPaml: new tests based on examples from BEAGLE Sep 7, 2010
NewickLexer.mll reorganize directories and clean up build infrastructure Sep 3, 2010
NewickParser.mly reorganize directories and clean up build infrastructure Sep 3, 2010
P.ml Change over to gsl-ocaml Dec 25, 2012
P.mli Change over to gsl-ocaml Dec 25, 2012
Parsimony.ml reorganize directories and clean up build infrastructure Sep 3, 2010
Parsimony.mli reorganize directories and clean up build infrastructure Sep 3, 2010
PhyloEM.ml Change over to gsl-ocaml Dec 25, 2012
PhyloEM.mli CamlPaml.PhyloEM: a bit of cleanup Oct 26, 2010
PhyloLik.ml CamlPaml.PhyloLik.node_posterior: avoid unnecessary computation of al… Apr 15, 2014
PhyloLik.mli rename CamlPaml.Infer -> CamlPaml.PhyloLik Sep 6, 2010
PhyloModel.ml CamlPaml.PhyloModel.P14n.update: simplify 'inheritance' of root prior… Aug 19, 2013
PhyloModel.mli CamlPaml.PhyloModel.P14n.update: simplify 'inheritance' of root prior… Aug 19, 2013
Q.ml CamlPaml: add test coverage of codepaths for non-reversible rate matr… Apr 14, 2014
Q.mli CamlPaml: add test coverage of codepaths for non-reversible rate matr… Apr 14, 2014
T.ml CamlPaml.T.congruent: correct assert statements Oct 25, 2010
T.mli reorganize directories and clean up build infrastructure Sep 3, 2010
Tools.ml reorganize directories and clean up build infrastructure Sep 3, 2010
_tags modernize ocamlbuild commands (3.12+) Jan 18, 2015
test.ml CamlPaml: add test coverage of codepaths for non-reversible rate matr… Apr 14, 2014