diff --git a/README.md b/README.md
index 76cff88a998..dfd93a5c68e 100644
--- a/README.md
+++ b/README.md
@@ -71,7 +71,7 @@ If you are compiling Armadillo by hand, ensure that LAPACK and BLAS are enabled.
 4. Building mlpack from source
 ------------------------------
 
-(see also [Building mlpack From Source](http://www.mlpack.org/doxygen.php?doc=build.html))
+(see also [Building mlpack From Source](http://www.mlpack.org/docs/mlpack-git/doxygen.php?doc=build.html))
 
 mlpack uses CMake as a build system and allows several flexible build
 configuration options. One can consult any of numerous CMake tutorials for
@@ -200,7 +200,7 @@ older versions of mlpack:
   - [mlpack homepage](http://www.mlpack.org/)
   - [Tutorials](http://www.mlpack.org/tutorials.html)
   - [Development Site (Github)](https://www.github.com/mlpack/mlpack/)
-  - [API documentation](http://www.mlpack.org/doxygen.php)
+  - [API documentation](http://www.mlpack.org/docs/mlpack-git/doxygen.php)
 
 7. Bug reporting
 ----------------