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MRG: Update backend parameter in stc.plot() #8395

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merged 7 commits into from Oct 22, 2020
Merged

MRG: Update backend parameter in stc.plot() #8395

merged 7 commits into from Oct 22, 2020

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GuillaumeFavelier
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This PR deprecates the backend parameter in plot_source_estimates

Closes #8394

@GuillaumeFavelier GuillaumeFavelier self-assigned this Oct 21, 2020
@GuillaumeFavelier
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For now, I used a fixture to skip test_stc_mpl when any 3d backend is present. Other solutions:

  • allow a "nobackend" 3d backend (maybe useful in the future?)
  • test _plot_mpl_stc directly (subroutine of stc.plot() but dedicated for mpl)

@agramfort
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following conversation on the original issue and I would not deprecate this param.

@GuillaumeFavelier
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So... I can only update it so that the internal call to set_3d_backend() is at least coherent.

@GuillaumeFavelier GuillaumeFavelier changed the title WIP: Deprecate backend parameter in stc.plot() WIP: Update backend parameter in stc.plot() Oct 21, 2020
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GuillaumeFavelier commented Oct 21, 2020 •
edited

I guess the patch half-coverage is because I have a branch that remains.

One call to stc.plot(backend='pyvista') should solve this

@hoechenberger hoechenberger mentioned this pull request Oct 21, 2020
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@hoechenberger
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@GuillaumeFavelier Can you add a changelog entry? Then it would be good to merge.

@GuillaumeFavelier
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I'm on it 👍

I'm just trying to make codecov happy before that :)

@GuillaumeFavelier GuillaumeFavelier changed the title WIP: Update backend parameter in stc.plot() MRG: Update backend parameter in stc.plot() Oct 21, 2020
@agramfort agramfort merged commit 71dd449 into mne-tools:master Oct 22, 2020
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@GuillaumeFavelier GuillaumeFavelier deleted the deprecate_stc_backend branch October 22, 2020 07:39
larsoner added a commit to adam2392/mne-python that referenced this pull request Oct 23, 2020
@larsoner
Merge remote-tracking branch 'upstream/master' into seeg
0d4ce38 
* upstream/master:
  Fix separate canvas (mne-tools#8408)
  FIX: focalpoint (mne-tools#8405)
  WIP: Refs (mne-tools#8406)
  tiny cosmetic improvements to BEM code (mne-tools#8404)
  MRG, ENH: Fix memory on CircleCI (mne-tools#8379)
  MRG: Update backend parameter in stc.plot() (mne-tools#8395)
@hoechenberger
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I think we should backport this…

@agramfort
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agramfort commented Oct 23, 2020 via email

hoechenberger added a commit to hoechenberger/mne-python that referenced this pull request Oct 23, 2020
@hoechenberger
Fix backend='pyvista' in stc.plot() (mne-tools#8395)
bef7b91
agramfort pushed a commit that referenced this pull request Oct 24, 2020
@hoechenberger
Fix backend='pyvista' in stc.plot() (#8395) (#8417)
74041b7
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@agramfort agramfort agramfort approved these changes

@hoechenberger hoechenberger hoechenberger approved these changes

@larsoner larsoner larsoner approved these changes

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@GuillaumeFavelier GuillaumeFavelier

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backend parameter of viz._3d.plot_source_estimates needs some love
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@GuillaumeFavelier @agramfort @hoechenberger @larsoner