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README.md

COVID-19

I want to collect the relevant material to orient our efforts for tackling the COVID-19 crisis into a direction where we can contribute, and similar projects are not focusing on it.

Related works:

Please enter a summary (one to two sentences) of any idea you know about regarding COVID-19 to collect the list of projects in progress:

Relevant links:

Please refer to any interesting piece of information:
CLAIRE Taskforce on COVID19: http://covid19.claire-ai.org/
Coronavirus research and innovation: https://ec.europa.eu/info/research-and-innovation/research-area/health-research-and-innovation/coronavirus-research-and-innovation_en

Available datasets:

List of the publically or privately available dataset:
COVID-19 Chest X-ray Dataset: https://github.com/ieee8023/covid-chestxray-dataset
COVID-CT-Dataset: https://github.com/UCSD-AI4H/COVID-CT

Name Task Source Patients Format Type Size Country Link(s)
CT machine learning dataset Classification multiple >20 NIftI 3D Various Global https://github.com/ieee8023/covid-chestxray-dataset
Lung infection segmentation dataset Both multiple >20 NIftI 3D Various Global https://zenodo.org/record/3757476#.Xpz8OcgzZPY
SARS-COV-2 Ct-Scan Dataset Classification single 120 png Slice Various Brazil https://www.kaggle.com/plameneduardo/sarscov2-ctscan-dataset
SARS-COV-2 Ct-Scan Dataset2 Classification single 210 png Slice Various Brazil https://dataverse.harvard.edu/dataset.xhtml?persistentId=doi:10.7910/DVN/SZDUQX
UCSD COVID-CT database Classification multiple >216 png/jpg Slice Various China https://github.com/UCSD-AI4H/COVID-CT
MosMed COVID-19 Chest CT database Both multiple 1110 NIftI 3D (512,512) Russia https://mosmed.ai/datasets/covid19_1110
COVID-19 CT segmentation dataset Segmentation single >40 NIftI Slice (512,512) Italy http://medicalsegmentation.com/covid19/

Challenges and competitions:

https://covid-ct.grand-challenge.org/CT-diagnosis-of-COVID-19/

Relevant literature:

List of the published research works:
chav: A overview of the state of the art on AI-based techniques for Covid-19 X-ray and CT imaging: https://arxiv.org/pdf/2004.02731.pdf
COVID-CT-Dataset: A CT Scan Dataset about COVID-19: https://arxiv.org/pdf/2003.13865v1.pdf
Unveiling COVID-19 from Chest X-ray with deep learning: a hurdles race with small data: https://arxiv.org/abs/2004.05405

Open research challenges:

  1. Small data
  2. Validation without clinical trial

Ideas for future work:

A sentence about any potential idea for contributing to the COVID-19 crisis:

Funding resources:

https://www.versusvirus.ch/funding

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