MOLGENIS - for scientific data: management, exploration, integration and analysis.
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Latest commit 2c15b60 Jun 14, 2016 @bartcharbon bartcharbon committed on GitHub Merge pull request #4964 from tommydeboer/fix/4910
Fix #4910 Internationalisation is broken for xmref and mref labels
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.github Update PULL_REQUEST_TEMPLATE.md Apr 22, 2016
molgenis-app #4194 As freemarkertemplate developer I want to set custom headers be… May 24, 2016
molgenis-catalogue bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-charts bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-core-ui Fix #4949 Settings filter is broken Jun 8, 2016
molgenis-core bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-das Get correct xml pull versions Jun 8, 2016
molgenis-data-annotators Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-data-csv bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-elasticsearch Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-data-examples bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-excel bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-googlespreadsheet bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-idcard Fixed SimpleDateFormatter to always use the English Locale. Jun 9, 2016
molgenis-data-import bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-mapper Fix #4913 Mappingservice: Can't map to categorical mref Jun 3, 2016
molgenis-data-merge bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-migrate customjavascript headers should be nillable (#4899) May 26, 2016
molgenis-data-mysql bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-rest-client bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-rest Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-data-semanticsearch Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-data-system bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-validation bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-data-vcf Overload of writeToVcf to support a simpler call with only Entity and… Jun 6, 2016
molgenis-data fix #4910 Jun 14, 2016
molgenis-dataexplorer Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-file-ingester Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-file Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-gavin Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-integration-tests #4194 As freemarkertemplate developer I want to set custom headers be… May 24, 2016
molgenis-jobs Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-js bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-model-registry bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-ontology-core bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-ontology Merge pull request #4876 from molgenis/1.21 May 18, 2016
molgenis-pathways bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-python bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-questionnaires Real fix Jun 2, 2016
molgenis-r bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-scripts-core bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-scripts bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-security-core bump to 1.22.0-SNAPSHOT May 18, 2016
molgenis-security bump to 1.22.0-SNAPSHOT May 18, 2016
.gitignore Add NPM modules and debug to git ignore Jan 20, 2016
LICENSE add license Aug 9, 2013
README.md Document how to turn off charts Apr 15, 2016
eclipse-java-molgenis-style.xml eclipse molgenis java code formatter: insert new line after annotatio… Mar 21, 2014
eclipse-javascript-molgenis-style.xml tweak settings: less padding and line breaks Dec 2, 2013
pom.xml Make mydas and jdas jar available @ runtime Jun 8, 2016

README.md

Build Status

Welcome to MOLGENIS

MOLGENIS is a collaborative open source project on a mission to generate great software infrastructure for life science research.

See http://molgenis.github.io for documentation.

Installation

See Getting Started Guide

Third-party software

For some modules in Molgenis, third-party software is in use. It is important to know that some of these licenses are different than the Molgenis license.

In this section you can find a list of remarks about third-party software in Molgenis modules.

molgenis-charts module

As a non-profit organisation we are using the Highsoft software 'highstock version 1.3.6', in the molgenis-charts module to build some charts.

Important! The Highsoft software product is not free for commercial use. For Highsoft products and pricing go to: http://shop.highsoft.com/

To turn-off/deactivate this functionality you can change the relevant setting for the data explorer:

  1. In the menu select Admin -> Settings
  2. Select the dataexplorer settings
  3. Set the value for Charts to No