The simulation code used in doi:10.1534/genetics.107.074948
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Makefile
README.md
ca.cc
ca.hpp
ca2.cc
cnvcoal.cc
coalesce.cc
coalesce.hpp
constants.hpp
dcoal.cc
dcoal_prior.cc
dcoalmk.cc
egc.cc
egc.hpp
fixation.cc
fixation.hpp
fixation2.cc
fixation2_old.cc
fixneutral.cc
givenT.cc
jointsfs.cc
kahan.hpp
rec.cc
rec.hpp
sfs.cc
summstats.cc
tajima90.cc
tajima90.hpp
test_new_coal.cc
testinsert.cc
times.cc
transition_sim.cc
util.cc
util.hpp

README.md

Bugfixe release on Oct 15, 2010. Should now compile on recent version of OS X and on Linux distributions that are using gcc 4.5