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Enable Launch Protein Viewer from File(s) for terminal-opened/remote files #44

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Enable Launch Protein Viewer from File(s) for terminal-opened/remote files #44

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00c1eda
Initial plan
Copilot May 22, 2026
f16f82f
Support launching viewer from active terminal-opened file
Copilot May 22, 2026
4faa5e9
Remove debug logs from file activation command
Copilot May 22, 2026
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2 changes: 2 additions & 0 deletions README.md
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Original file line number Diff line number Diff line change
Expand Up @@ -27,6 +27,8 @@ Open the command palette (`⌘ + ⇧ + p`) and simply call the `Start Protein Vi

Right-click on the file or selection of files in the file editor and select `Launch Protein Viewer from File(s)`

You can also open a file in the editor from the integrated terminal (for example on a remote server) and then run `Launch Protein Viewer from File(s)` from the command palette to load the active file.

**✅ Supported Formats**

* `.pdb`
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15 changes: 12 additions & 3 deletions out/extension.js
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2 changes: 1 addition & 1 deletion out/extension.js.map
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19 changes: 15 additions & 4 deletions src/extension.ts
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Expand Up @@ -14,10 +14,21 @@ export async function activate(context: vscode.ExtensionContext) {
});
});

const activateFromFiles = vscode.commands.registerCommand("protein-viewer.activateFromFiles", (file_uri: vscode.Uri, selectedFiles: vscode.Uri[]) => {
console.log(file_uri);
console.log(selectedFiles);
ProteinViewerPanel.renderFromFiles(context.extensionUri, selectedFiles);
const activateFromFiles = vscode.commands.registerCommand("protein-viewer.activateFromFiles", (file_uri: vscode.Uri | undefined, selectedFiles: vscode.Uri[] | undefined) => {
const filesToOpen = selectedFiles && selectedFiles.length > 0
? selectedFiles
: file_uri
? [file_uri]
: vscode.window.activeTextEditor
? [vscode.window.activeTextEditor.document.uri]
: [];

if (filesToOpen.length === 0) {
void vscode.window.showErrorMessage("No structure file selected or active.");
return;
}

ProteinViewerPanel.renderFromFiles(context.extensionUri, filesToOpen);
});

const activateFromFolder = vscode.commands.registerCommand("protein-viewer.activateFromFolder", (folder_uri: vscode.Uri) => {
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