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Data Ingestion Pipeline for SciGraph
HPO Annotation QC
Repository for representing genotypes and their association with phenotypes
Ontology for representing scientific evidence and provenance information
Pipeline for building mondo
Toolkit for analyzing subsets of hpo terms
phenol: Phenotype ontology library
Java library to map LOINC-encoded test results to Human Phenotype Ontology
static files for HPO website
Identifier equivalency service
Ontology Based Profile Matching
Monarch web application and API
Build two Docker images with the monarch configs. Uses master HEAD from the SciGraph github repo.
store artifacts generated ingesting Monarch's sources via Dipper
Top level monarch importer ontology
Scripts to analyze monarch data sets and scigraph
THIS IS THE OLD REPO: Use this one instead: https://github.com/monarch-initiative/mondo-build
Docker image to create the solr index for the search core.
Fanconi Anemia INCAForm site
Generates a solr index of plain language terms in the HPO and their grouping classes
Patient self-phenotyping tools and project management
Perform text mining for identification of HPO terms in free text from scientific publication.
Utility to generate a schema.xml from a yaml config file.