SciGraph-docker-monarch-ontology

Build two Docker images with the monarch configs. Uses master HEAD from the SciGraph github repo.

Need to have docker installed in order to run the build.

Generate the docker images locally:

mvn package

Load the graph:

docker run -v /tmp/graph:/scigraph scigraph-load-monarch

Run the services:

docker run -v /tmp/graph:/scigraph -d -p 9000:9000 --name scigraph-services scigraph-services-monarch

Stop the services:

docker stop scigraph-services

Read logs of the services:

docker logs scigraph-services

Tips, remove all the local images

docker rm $(docker ps -a -q)

docker rmi $(docker images -q)

Enabling the image writers

add that in the /etc/rc.local Xvfb :1 -screen 0 800x600x16 &

and that in the /etc/environment export DISPLAY=:1