{"payload":{"feedbackUrl":"https://github.com/orgs/community/discussions/53140","repo":{"id":654283114,"defaultBranch":"develop","name":"oncoexporter","ownerLogin":"monarch-initiative","currentUserCanPush":false,"isFork":false,"isEmpty":false,"createdAt":"2023-06-15T19:32:24.000Z","ownerAvatar":"https://avatars.githubusercontent.com/u/5161984?v=4","public":true,"private":false,"isOrgOwned":true},"refInfo":{"name":"","listCacheKey":"v0:1719325286.0","currentOid":""},"activityList":{"items":[{"before":"f392b2c01a019cb096b2272f5b36cd146ff352db","after":"dc3da688dc23d4706cbb23222ce45757daf538c5","ref":"refs/heads/fix_stage","pushedAt":"2024-07-16T20:58:03.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msierk","name":"Michael Sierk","path":"/msierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56087985?s=80&v=4"},"commit":{"message":"fixed stage testing","shortMessageHtmlLink":"fixed stage testing"}},{"before":"9c4bd63b1eb7a1b89a706816a50d4f5f234eb61e","after":"f392b2c01a019cb096b2272f5b36cd146ff352db","ref":"refs/heads/fix_stage","pushedAt":"2024-07-16T18:43:09.000Z","pushType":"push","commitsCount":2,"pusher":{"login":"msierk","name":"Michael Sierk","path":"/msierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56087985?s=80&v=4"},"commit":{"message":"Merge branch 'fix_stage' of https://github.com/monarch-initiative/oncoexporter into fix_stage","shortMessageHtmlLink":"Merge branch 'fix_stage' of https://github.com/monarch-initiative/onc…"}},{"before":"c46215b65eb68b15c9574f06e52741b5cb8ea461","after":"9c4bd63b1eb7a1b89a706816a50d4f5f234eb61e","ref":"refs/heads/fix_stage","pushedAt":"2024-07-09T16:27:41.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Revert \"minor updates\"\n\nThis reverts commit 5bd0b67945d9be2f8fa937e309248e7c4caa66c2.","shortMessageHtmlLink":"Revert \"minor updates\""}},{"before":"5bd0b67945d9be2f8fa937e309248e7c4caa66c2","after":"c46215b65eb68b15c9574f06e52741b5cb8ea461","ref":"refs/heads/fix_stage","pushedAt":"2024-07-09T15:01:08.000Z","pushType":"push","commitsCount":4,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Fix key error","shortMessageHtmlLink":"Fix key error"}},{"before":"4346b373a5be728db5e1945cdcc573efe264cdeb","after":"5bd0b67945d9be2f8fa937e309248e7c4caa66c2","ref":"refs/heads/fix_stage","pushedAt":"2024-07-09T14:24:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msierk","name":"Michael Sierk","path":"/msierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56087985?s=80&v=4"},"commit":{"message":"minor updates","shortMessageHtmlLink":"minor updates"}},{"before":"84dd0cab5a84b0fee9a14143bd3600e8a11b9aaf","after":"4346b373a5be728db5e1945cdcc573efe264cdeb","ref":"refs/heads/fix_stage","pushedAt":"2024-07-05T14:46:00.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Fix GdcService in tests/","shortMessageHtmlLink":"Fix GdcService in tests/"}},{"before":"6cd90138df84b7edf875792f07881f327ebddeb2","after":"84dd0cab5a84b0fee9a14143bd3600e8a11b9aaf","ref":"refs/heads/fix_stage","pushedAt":"2024-07-05T14:44:40.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Fix GdcService in tests/","shortMessageHtmlLink":"Fix GdcService in tests/"}},{"before":"1217de70806dc0cae92aa56a10c9ea5d0feecae4","after":"6cd90138df84b7edf875792f07881f327ebddeb2","ref":"refs/heads/fix_stage","pushedAt":"2024-07-05T14:38:32.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Fix GdcService in __init__.py","shortMessageHtmlLink":"Fix GdcService in __init__.py"}},{"before":"898ccef69d71e771e033e596393fa3908a082570","after":"1217de70806dc0cae92aa56a10c9ea5d0feecae4","ref":"refs/heads/fix_stage","pushedAt":"2024-07-05T14:31:36.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Add pd import","shortMessageHtmlLink":"Add pd import"}},{"before":null,"after":"898ccef69d71e771e033e596393fa3908a082570","ref":"refs/heads/fix_stage","pushedAt":"2024-06-25T14:21:26.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"msierk","name":"Michael Sierk","path":"/msierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56087985?s=80&v=4"},"commit":{"message":"Changes to cda_table_importer and cda_disease_factory\nto account for having to get stage from GDC directly. Also changed GET to POST\nto speed things up.","shortMessageHtmlLink":"Changes to cda_table_importer and cda_disease_factory"}},{"before":"2dedb961751190cae526d0e1ce4e13a152c0e501","after":"6a7fa51f0f0b46b6cc2602b7fa71a791830d4d39","ref":"refs/heads/issue-87","pushedAt":"2024-04-30T14:53:09.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Refactor/fix survival time for patients that are alive (right censored patients)","shortMessageHtmlLink":"Refactor/fix survival time for patients that are alive (right censore…"}},{"before":"ab86d3bad3a49ba1662f5536b447eee19068030f","after":null,"ref":"refs/heads/issue-82","pushedAt":"2024-04-23T15:14:10.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"}},{"before":"e140f3c2b52a21c129731a0bd46ef9dc5c73eec0","after":"2dedb961751190cae526d0e1ce4e13a152c0e501","ref":"refs/heads/issue-87","pushedAt":"2024-04-23T15:13:38.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Update scripts to new CDA API syntax","shortMessageHtmlLink":"Update scripts to new CDA API syntax"}},{"before":null,"after":"ab86d3bad3a49ba1662f5536b447eee19068030f","ref":"refs/heads/issue-82","pushedAt":"2024-04-23T15:13:26.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"make call to fetch_vital_status() in _gdc API","shortMessageHtmlLink":"make call to fetch_vital_status() in _gdc API"}},{"before":null,"after":"e140f3c2b52a21c129731a0bd46ef9dc5c73eec0","ref":"refs/heads/issue-87","pushedAt":"2024-04-23T00:25:03.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"sujaypatil96","name":"Sujay Patil","path":"/sujaypatil96","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20239224?s=80&v=4"},"commit":{"message":"calculate survival time for subjects that are still alive","shortMessageHtmlLink":"calculate survival time for subjects that are still alive"}},{"before":"ecbdd801d2ea80fa112862b7ff9eed91482443df","after":"b41a19e773dbfc3e6295f6e43cc93c402e8bdc0e","ref":"refs/heads/gh-pages","pushedAt":"2024-04-16T20:29:07.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 0894f71 with MkDocs version: 1.5.3","shortMessageHtmlLink":"Deployed 0894f71 with MkDocs version: 1.5.3"}},{"before":"ab86d3bad3a49ba1662f5536b447eee19068030f","after":null,"ref":"refs/heads/issue-82","pushedAt":"2024-04-16T20:28:43.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"sujaypatil96","name":"Sujay Patil","path":"/sujaypatil96","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20239224?s=80&v=4"}},{"before":"4a8df16bfdee8c09b84ea0ced586a1e5d7842249","after":"0894f7156533f2e5d3dc1af90bd4647e13120992","ref":"refs/heads/develop","pushedAt":"2024-04-16T20:28:33.000Z","pushType":"pr_merge","commitsCount":6,"pusher":{"login":"sujaypatil96","name":"Sujay Patil","path":"/sujaypatil96","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20239224?s=80&v=4"},"commit":{"message":"Merge pull request #85 from monarch-initiative/issue-82\n\nPull in survival time and vital status metadata from GDC","shortMessageHtmlLink":"Merge pull request #85 from monarch-initiative/issue-82"}},{"before":"6f58d49e66fc7a3bbd8de2ec8f19d41c7bd69e6a","after":"ab86d3bad3a49ba1662f5536b447eee19068030f","ref":"refs/heads/issue-82","pushedAt":"2024-04-16T17:34:21.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"sujaypatil96","name":"Sujay Patil","path":"/sujaypatil96","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20239224?s=80&v=4"},"commit":{"message":"make call to fetch_vital_status() in _gdc API","shortMessageHtmlLink":"make call to fetch_vital_status() in _gdc API"}},{"before":"b6b0500c6f0a01393810cb721d18539e8706f363","after":"6f58d49e66fc7a3bbd8de2ec8f19d41c7bd69e6a","ref":"refs/heads/issue-82","pushedAt":"2024-04-15T23:06:29.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"sujaypatil96","name":"Sujay Patil","path":"/sujaypatil96","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20239224?s=80&v=4"},"commit":{"message":"missed merge conflict resolution","shortMessageHtmlLink":"missed merge conflict resolution"}},{"before":null,"after":"4a8df16bfdee8c09b84ea0ced586a1e5d7842249","ref":"refs/heads/new_CDA_API","pushedAt":"2024-04-15T21:10:35.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"msierk","name":"Michael Sierk","path":"/msierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56087985?s=80&v=4"},"commit":{"message":"Merge pull request #86 from monarch-initiative/update_cda\n\nUpdate cdapython dependency","shortMessageHtmlLink":"Merge pull request #86 from monarch-initiative/update_cda"}},{"before":"e60ec5230afa2de972bdd53183bfa1bf3daf553c","after":"b6b0500c6f0a01393810cb721d18539e8706f363","ref":"refs/heads/issue-82","pushedAt":"2024-04-15T20:47:48.000Z","pushType":"push","commitsCount":7,"pusher":{"login":"sujaypatil96","name":"Sujay Patil","path":"/sujaypatil96","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/20239224?s=80&v=4"},"commit":{"message":"Merge branch 'develop' into issue-82","shortMessageHtmlLink":"Merge branch 'develop' into issue-82"}},{"before":"2b8785e6d6a4fe4f2936de33aee2b7a117c8c62a","after":"ecbdd801d2ea80fa112862b7ff9eed91482443df","ref":"refs/heads/gh-pages","pushedAt":"2024-04-12T18:46:21.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed 4a8df16 with MkDocs version: 1.5.3","shortMessageHtmlLink":"Deployed 4a8df16 with MkDocs version: 1.5.3"}},{"before":"2027715c0cb6d09f013458a9871ec567d3aee905","after":null,"ref":"refs/heads/update_cda","pushedAt":"2024-04-12T18:45:52.000Z","pushType":"branch_deletion","commitsCount":0,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"}},{"before":"bc0ec022ea32b24303c97d7f9ff02dd3d91feeef","after":"4a8df16bfdee8c09b84ea0ced586a1e5d7842249","ref":"refs/heads/develop","pushedAt":"2024-04-12T18:45:49.000Z","pushType":"pr_merge","commitsCount":2,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Merge pull request #86 from monarch-initiative/update_cda\n\nUpdate cdapython dependency","shortMessageHtmlLink":"Merge pull request #86 from monarch-initiative/update_cda"}},{"before":null,"after":"2027715c0cb6d09f013458a9871ec567d3aee905","ref":"refs/heads/update_cda","pushedAt":"2024-04-12T18:44:53.000Z","pushType":"branch_creation","commitsCount":0,"pusher":{"login":"justaddcoffee","name":"Justin Reese","path":"/justaddcoffee","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/150311?s=80&v=4"},"commit":{"message":"Update cdapython dependency","shortMessageHtmlLink":"Update cdapython dependency"}},{"before":"23d64a50dda7cc7d03b8e1cd6ed785cdd785a3c4","after":"2b8785e6d6a4fe4f2936de33aee2b7a117c8c62a","ref":"refs/heads/gh-pages","pushedAt":"2024-04-11T20:58:53.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed bc0ec02 with MkDocs version: 1.5.3","shortMessageHtmlLink":"Deployed bc0ec02 with MkDocs version: 1.5.3"}},{"before":"ac183cae2739e198f6f409411163698f7edf51b5","after":"bc0ec022ea32b24303c97d7f9ff02dd3d91feeef","ref":"refs/heads/develop","pushedAt":"2024-04-11T20:58:19.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msierk","name":"Michael Sierk","path":"/msierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56087985?s=80&v=4"},"commit":{"message":"edited comments","shortMessageHtmlLink":"edited comments"}},{"before":"509a06ee4c514d873757ec2402ead70fd7dbd3a4","after":"23d64a50dda7cc7d03b8e1cd6ed785cdd785a3c4","ref":"refs/heads/gh-pages","pushedAt":"2024-04-11T18:53:28.000Z","pushType":"force_push","commitsCount":0,"pusher":{"login":"github-actions[bot]","name":null,"path":"/apps/github-actions","primaryAvatarUrl":"https://avatars.githubusercontent.com/in/15368?s=80&v=4"},"commit":{"message":"Deployed ac183ca with MkDocs version: 1.5.3","shortMessageHtmlLink":"Deployed ac183ca with MkDocs version: 1.5.3"}},{"before":"8c7b2caaf0a52698151bca3a4fd6cf34520b7f11","after":"ac183cae2739e198f6f409411163698f7edf51b5","ref":"refs/heads/develop","pushedAt":"2024-04-11T18:52:56.000Z","pushType":"push","commitsCount":1,"pusher":{"login":"msierk","name":"Michael Sierk","path":"/msierk","primaryAvatarUrl":"https://avatars.githubusercontent.com/u/56087985?s=80&v=4"},"commit":{"message":"fixed getting variants from GDC","shortMessageHtmlLink":"fixed getting variants from GDC"}}],"hasNextPage":true,"hasPreviousPage":false,"activityType":"all","actor":null,"timePeriod":"all","sort":"DESC","perPage":30,"cursor":"djE6ks8AAAAEgTJ_fgA","startCursor":null,"endCursor":null}},"title":"Activity · monarch-initiative/oncoexporter"}