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monarch-initiative/owlsim-v3

Code Issues 46 Pull requests 3 Projects 0

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Add option in services layer to include pairwise matches in all phenotypes
#88 opened May 18, 2017 by cmungall
services: should be possible to match by individual IDs as well as class IDs
#81 opened Apr 5, 2017 by cmungall
Add paging to ontomatch service
#69 opened Mar 10, 2017 by cmungall

5
Provide better documentation for how to use owlsim-v3 as a java library
#65 opened Mar 7, 2017 by cmungall
Make specific routes for the different matchers
#63 opened Mar 3, 2017 by cmungall
Add capability to breakdown similarity results by symptom or high level terms
#59 opened Mar 1, 2017 by cmungall

1
Refactor or better document loaders
#57 opened Feb 28, 2017 by cmungall

10
Implement bayesian frequency awareness R24
#56 opened Feb 28, 2017 by cmungall

3
Align with drseb code
#55 opened Feb 28, 2017 by cmungall
Allow querying by individual id
#54 opened Feb 28, 2017 by cmungall
Register with smart API
#44 opened Jan 17, 2017 by cmungall

1
Add routes to service to introspect details of loaded ontologies
#43 opened Jan 16, 2017 by cmungall

1
Add service to return list of matchers plus their characteristics
#39 opened Jan 12, 2017 by cmungall
services: return more informative error messages
#38 opened Dec 21, 2016 by cmungall
too much logging info
#35 opened Dec 3, 2016 by cmungall
services: change parameter names in match
#34 opened Dec 2, 2016 by cmungall
Write some examples/tests that demonstrate some general fuctionalities
#31 opened Dec 2, 2016 by cmungall
Full test v3 vs v2 for both speed and accuracy
#23 opened May 12, 2016 by cmungall Use in Production
Bridge to owlsim2 service layer
#22 opened May 12, 2016 by cmungall Use in Production
testSelfComparisonKS in ICDistributionTest sometimes fails
#18 opened Nov 10, 2015 by cmungall
ICDistributionTest.testSelfComparisonKS sometimes fails
#15 opened May 27, 2015 by cmungall
Handling apparent contradicitions with negation data R24
#13 opened May 2, 2015 by cmungall

7
Implement MatchMaker v1 API
#8 opened Oct 30, 2014 by cmungall

2

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