diff --git a/README.md b/README.md index 56d793e..04c1cd1 100644 --- a/README.md +++ b/README.md @@ -40,8 +40,16 @@ And then execute: ### Example +After installing with `gem install` then the `aai` program should be available to you. Try and get the help page: + +``` +$ aai --help +``` + +Then run the program like this: + ``` -$ ruby exe/aai.rb --infiles *.fa --outdir aai_output +$ aai --infiles *.fa --outdir aai_output ``` ### Options