//delete accnos file if its blank else report to user
if (m->isBlank(accnosFileName)) { m->mothurRemove(accnosFileName); hasAccnos = false; }
else {
- m->mothurOut("Some of your sequences generated alignments that eliminated too many bases, a list is provided in " + accnosFileName + ".");
+ m->mothurOut("[WARNING]: Some of your sequences generated alignments that eliminated too many bases, a list is provided in " + accnosFileName + ".");
if (!flip) {
m->mothurOut(" If you set the flip parameter to true mothur will try aligning the reverse compliment as well.");
}else{ m->mothurOut(" If the reverse compliment proved to be better it was reported."); }
0 comments on commit
1f88637