Adds tax spaces to classify.otu

#265
mothur · 8d8485f1ce8021f404978657284947ba9726d495 · mothur-westcott committed Aug 25, 2016 · Aug 25, 2016 · 8d8485f
1 parent fadc872
commit 8d8485f1ce8021f404978657284947ba9726d495
Unified Split

Showing with 4 additions and 4 deletions.

+3 −3 source/commands/classifyotucommand.cpp

+1 −1 source/commands/summarytaxcommand.cpp
diff --git a/source/commands/classifyotucommand.cpp b/source/commands/classifyotucommand.cpp
@@ -790,11 +790,11 @@ int ClassifyOtuCommand::processTaxMap() {
             if (spot != 0) {
                 string newTax = "";
                 for (int i = 0; i < taxons.size(); i++) {  newTax += taxons[i] + ";";  }
-                for (int i = spot; i < taxLength; i++) {
-                    if(tax[i] == ';'){   newTax += "unclassified;"; }
+                //for (int i = spot; i < taxLength; i++) {
+                    //if(tax[i] == ';'){   newTax += "unclassified;"; }
                     m->removeConfidences(newTax);
                     it->second = newTax;
-                }
+                //}
             }else { m->removeConfidences(tax); it->second = tax; } //leave tax alone
         }
         return 0;
diff --git a/source/commands/summarytaxcommand.cpp b/source/commands/summarytaxcommand.cpp
@@ -368,7 +368,7 @@ string SummaryTaxCommand::processTaxMap(string tax) {
             for (int i = 0; i < taxons.size(); i++) {  newTax += taxons[i] + ";";  }
             //for (int i = spot; i < taxLength; i++) {
                 //if(tax[i] == ';'){   newTax += "unclassified;"; }
-                //m->removeConfidences(newTax);
+                m->removeConfidences(newTax);
             //}
         }else { m->removeConfidences(tax); newTax = tax; } //leave tax alone