Permalink
Browse files

Adds name file counts to *tax.summary

Summary.tax command
  • Loading branch information...
1 parent 7b0b4d0 commit 9b6714e1da1143b80e0f9acd89b180ee72f86041 @mothur-westcott mothur-westcott committed Jul 5, 2016
Showing with 2 additions and 2 deletions.
  1. +2 −2 source/commands/summarytaxcommand.cpp
@@ -255,14 +255,14 @@ int SummaryTaxCommand::execute(){
if (threshold != 0) { taxon = processTaxMap(taxon); }
- cout << taxon << endl;
+ //cout << taxon << endl;
//add sequence to summary, countfile info included from Phylosummary constructor
taxaSum->addSeqToTree(name, taxon);
}
in.close();
}
- else if ((threshold != 0) && (namefile != "")) {
+ else if (namefile != "") {
map<string, vector<string> > nameMap;
map<string, vector<string> >::iterator itNames;
m->readNames(namefile, nameMap);

0 comments on commit 9b6714e

Please sign in to comment.