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Command Typos #191

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mothur-westcott opened this Issue Jan 5, 2016 · 2 comments

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mothur-westcott commented Jan 5, 2016

mothur > make.contigs(file=stability.files, oligos=oligos.oligos ,processors=8)
Unable to open oligos.oligos .

The space after the comma is included in the filename.

Mothur should be made more flexible.

@mothur-westcott mothur-westcott added Bugs Support New mothur user labels Jan 5, 2016

@mothur-westcott mothur-westcott self-assigned this Jan 5, 2016

@mothur-westcott mothur-westcott added this to the Bug / Support Tracking milestone Jan 5, 2016

@campenr campenr referenced this issue Apr 17, 2016

Merged

Strip whitespace from command arguments. #228

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mothur-westcott commented Apr 19, 2016

Completed with 7f1d921
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mothur-westcott commented Apr 19, 2016

Can handle commands like:

summary.seqs( fasta = test.fasta , processors = 1 )
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