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Mothur expects confidence scores to be in-between the () characters. When it tries to convert MHVG to a number it crashes. You can fix this by changing the () characters to || characters.
The taxonomy file contains taxons like:
FR682493.1.1461 D_0__Archaea;D_1__Marine Hydrothermal Vent Group(MHVG);D_2__uncultured archaeon;D_3__uncultured archaeon;D_4__uncultured archaeon;D_5__uncultured archaeon;D_6__uncultured archaeon;
Mothur expects confidence scores to be in-between the () characters. When it tries to convert MHVG to a number it crashes. You can fix this by changing the () characters to || characters.
FR682493.1.1461 D_0__Archaea;D_1__Marine Hydrothermal Vent Group|MHVG|;D_2__uncultured archaeon;D_3__uncultured archaeon;D_4__uncultured archaeon;D_5__uncultured archaeon;D_6__uncultured archaeon;
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