From de86fc7e37469de15d0a09059c7f21ac9240861a Mon Sep 17 00:00:00 2001 From: Matt Belhorn Date: Thu, 2 Sep 2021 15:17:51 -0400 Subject: [PATCH] Updates Adios, Tau, darshan build variants; adds imagemagick Summit Additional build variants of TAU with combinatorial support CUDA and OMP profiling enabled-or-disabled are added to Summit. Module suffixes are used to distinguish the different build variants. Darshan-runtime without HDF5 support is added and made the default build. Modules for this variant are suffixed `-lite` and re-added to the default loaded DefApps modules. Adios 1.13.1 is installed for a special case request by a user. Imagemagick is installed at user request. An attempt to install the latest netlib-lapack using the XL compilers is added. These builds still fail due to a configure-time bug validating xlf when building the static versions of the libraries. XLF attempts to link GCC runtime libs into the build without providing the necessary library directories or without static libraries available. The failure output from a build attempt which forces the `-qstaticlink` flag is shown below, but `-qstaticlink` is not set for a normal build and it's presence has no effect on the error. A similar error is already reported upstream https://github.com/Reference-LAPACK/lapack/issues/606: ``` Build flags: ;-O3;-qnohot;-qstaticlink Id flags: -v The output was: 1 exec: export(export,XL_CONFIG=/sw/summit/xl/16.1.1-10/xlf/16.1.1/etc/xlf.cfg.rhel.8.2.gcc.8.3.1.cuda.11.0:xlf_r,NULL) exec: export(export,XL_DIS=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/dis -o "CMakeFortranCompilerId.s" "CMakeFortranCompilerId.o",NULL) exec: /autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/cpp(/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/cpp,CMakeFortranCompilerId.F,/tmp/xlf.jWEE22/0hkYDH,-D__ibmxl__,-C,-q64,-I/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlmass/9.1.1/include,-I/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlsmp/5.1.1/include,-I/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/include,NULL) exec: /autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfentry(/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfentry,/tmp/xlf.jWEE22/0hkYDH,/tmp/xlf.jWEE22/vMULQf,/tmp/xlf.jWEE22/vMULQfF.lst,xlfsmsg.cat,xlfmsg.cat,CMakeFortranCompilerId.F,OSVAR(rhel.8.2),THREADED,NOZEROSIZE,ALIAS(intptr),POSITION(appendold),XLF90(noautodealloc,nosignedzero,oldpad),XLF77(intarg,intxor,noleadzero,gedit77,noblankpad,oldboz,softeof),XLF2003(nopolymorphic,nobozlitargs,nostopexcept,novolatile,noautorealloc,oldnaninf),XLF2008(nocheckpresence),64,GNU_VERSION(8.3.1),SAVEOPTFILE(/tmp/xlf.jWEE22/optf.lUZ5eB),SAVEVERSIONFILE(/tmp/xlf.jWEE22/version.Ck8wr9),OPT(3),NOHOT,WSTREAMS(/tmp/xlf.jWEE22/h1,/tmp/xlf.jWEE22/b1,/tmp/xlf.jWEE22/s1),DEFMSG(/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/msg/en_US),XFLAG(CPP),-I/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlmass/9.1.1/include,-I/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlsmp/5.1.1/include,-I/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/include,NULL) ** cmakefortrancompilerid === End of Compilation 1 === unlink: /tmp/xlf.jWEE22/0hkYDH exec: export(export,XL_FRONTEND=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfentry,NULL) exec: export(export,XL_ASTI=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfhot,NULL) exec: export(export,XL_BACKEND=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfcode,NULL) exec: export(export,XL_LINKER=/usr/bin/ld,NULL) exec: export(export,XL_BOLT=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/bolt,NULL) exec: /autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfhot(/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfhot,/tmp/xlf.jWEE22/h1,/tmp/xlf.jWEE22/h2,/tmp/xlf.jWEE22/b1,/tmp/xlf.jWEE22/b2,/tmp/xlf.jWEE22/s1,/tmp/xlf.jWEE22/s2,/tmp/xlf.jWEE22/vMULQf,/tmp/xlf.jWEE22/vMULQfA.lst,NULL) exec: export(export,XL_FRONTEND=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfentry,NULL) exec: export(export,XL_ASTI=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfhot,NULL) exec: export(export,XL_BACKEND=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfcode,NULL) exec: export(export,XL_LINKER=/usr/bin/ld,NULL) exec: export(export,XL_BOLT=/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/bolt,NULL) exec: /autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfcode(/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/exe/xlfcode,/tmp/xlf.jWEE22/h2,/tmp/xlf.jWEE22/b2,CMakeFortranCompilerId.o,/tmp/xlf.jWEE22/vMULQfB.lst,/tmp/xlf.jWEE22/s2,NULL) 1501-510 Compilation successful for file CMakeFortranCompilerId.F. unlink: /tmp/xlf.jWEE22/vMULQfA.lst exec: /usr/bin/ld(ld,--eh-frame-hdr,-Qy,-melf64lppc,-static,/usr/lib/gcc/ppc64le-redhat-linux/8/../../../../lib64/crt1.o,/usr/lib/gcc/ppc64le-redhat-linux/8/../../../../lib64/crti.o,/usr/lib/gcc/ppc64le-redhat-linux/8/crtbeginT.o,-L/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlsmp/5.1.1/lib,-L/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlmass/9.1.1/lib,-L/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/xlf/16.1.1/lib,-R/autofs/nccs-svm1_sw/summit/xl/16.1.1-10/lib,-L/usr/lib/gcc/ppc64le-redhat-linux/8,-L/usr/lib/gcc/ppc64le-redhat-linux/8/../../../../lib64,-L/lib/../lib64,-L/usr/lib/../lib64,-L/sw/summit/spack-envs/base/opt/linux-rhel8-ppc64le/xl-16.1.1-10/spectrum-mpi-10.4.0.3-20210112-v7qymniwgi6mtxqsjd7p5jxinxzdkhn3/lib,-L/ccs/proj/ccsstaff/olcf4_acceptance/devel/nccs_test_harness/libraries,-L/usr/lib/gcc/ppc64le-redhat-linux/8/../../..,--no-toc-optimize,--no-toc-optimize,--no-toc-optimize,--no-toc-optimize,--no-toc-optimize,--no-toc-optimize,CMakeFortranCompilerId.o,-lxlf90_r,-lxlopt,-lxlomp_ser,-lxl,-lxlfmath,-ldl,-lrt,-lpthread,-lm,-lc,-lgcc_eh,-lc,-lgcc,/usr/lib/gcc/ppc64le-redhat-linux/8/crtend.o,/usr/lib/gcc/ppc64le-redhat-linux/8/../../../../lib64/crtn.o,NULL) | exec: /usr/bin/awk(/usr/bin/awk,BEGIN{a=0;b=0;s=""};{if(($0!~/.*-224.*@TP.*/)&&($0!~/.*-34[45].*loadmap.*/||b==1||a==0)){b=1;print $0;}else{a=1;if((s=="")&& $0 ~ /.*-34[45].*loadmap.*/){s=$0}}};END{if(b==1 && s!=""){print s}},NULL) ld: cannot find -ldl ld: cannot find -lrt ld: cannot find -lpthread ld: cannot find -lm ld: cannot find -lc ld: cannot find -lc unlink: /tmp/xlf.jWEE22/optf.lUZ5eB unlink: /tmp/xlf.jWEE22/h1 unlink: /tmp/xlf.jWEE22/h2 unlink: /tmp/xlf.jWEE22/b1 unlink: /tmp/xlf.jWEE22/b2 unlink: /tmp/xlf.jWEE22/s1 unlink: /tmp/xlf.jWEE22/s2 unlink: /tmp/xlf.jWEE22/version.Ck8wr9 unlink: /tmp/xlf.jWEE22 ``` --- hosts/summit/envs/base/spack.lock | 17500 ++++++++++------ hosts/summit/envs/base/spack.yaml | 66 +- .../modulefiles/static/site/Core/DefApps.lua | 2 +- spack | 2 +- 4 files changed, 10600 insertions(+), 6970 deletions(-) diff --git a/hosts/summit/envs/base/spack.lock b/hosts/summit/envs/base/spack.lock index d68f12e9..d8637c92 100644 --- a/hosts/summit/envs/base/spack.lock +++ b/hosts/summit/envs/base/spack.lock @@ -113,9 +113,13 @@ "spec": "nco%gcc@8.3.1~mpi-deps" }, { - "hash": "wlahruhd4xxf7zmmrb5r6aiiexxe7bwj", + "hash": "fdmjhbhc3xfp4ufu3yhibnr5vy3ohsyh", "spec": "libfabric%gcc@8.3.1" }, + { + "hash": "fdmjhbhc3xfp4ufu3yhibnr5vy3ohsyh", + "spec": "libfabric%gcc@8.3.1 ^rdma-core@system" + }, { "hash": "zy4td4rdi2boj4dzlmufijzkkmgao3b6", "spec": "git-lfs%gcc@8.3.1" @@ -152,6 +156,10 @@ "hash": "ezrajeebfu5fsa7g6zdv7fytttyhgizg", "spec": "googletest%gcc@8.3.1" }, + { + "hash": "yucsvmfy5zouwzdurckbxcmh627zzxt5", + "spec": "imagemagick%gcc@8.3.1" + }, { "hash": "rrqj5ejhkawqubknqqzl64anxsbastpy", "spec": "spectrum-mpi%gcc@7.5.0" @@ -212,14 +220,6 @@ "hash": "c3o5lwxvnzyerrrjhsafdxb62vzrjjz2", "spec": "spectrum-mpi%pgi@20.1" }, - { - "hash": "b2dbc7asmozcyaodhwlee4qnhpwmxrlr", - "spec": "darshan-runtime@3.2.1%gcc@8.3.1" - }, - { - "hash": "kc4qh4hsgfdkql5w5e34wwpdc2dovemw", - "spec": "darshan-runtime@3.3.0%gcc@8.3.1" - }, { "hash": "einmeu4aawq6ls2xh5orqcbthy7ly7wa", "spec": "scorep@7.0%gcc@8.3.1+mpi+papi" @@ -229,9 +229,13 @@ "spec": "valgrind%gcc@8.3.1+boost+mpi~ubsan" }, { - "hash": "za3xurbp2fua5oecm7lrmsoeo27moprb", + "hash": "ey7muwoy4ukunhwcjhbedmcmrufob2zi", "spec": "adios2%gcc@8.3.1+python ^python@3.7.7" }, + { + "hash": "f47pso2jggihi6sr55yo6zdhn56pntlv", + "spec": "adios@1.13.1%gcc@8.3.1+blosc+bzip2+fortran+hdf5+infiniband+netcdf" + }, { "hash": "b3huyvdjpfrvkmnyyrvem6lvyl35viti", "spec": "gdrcopy%gcc@8.3.1" @@ -445,15 +449,15 @@ "spec": "mpip%gcc@9.3.0 ^cuda@11.0.3" }, { - "hash": "c7x4slcjbrb5akttixeyfil5asxygkc6", + "hash": "zqqdena4zhbjpazqqno234vvjqboxb7y", "spec": "adios2%gcc@8.3.1~python ^cuda@11.0.3" }, { - "hash": "qqtqpk4zj5e34yfsmuj4w4yyiky3yn6a", + "hash": "wed7etdcj42brp53imokce34xh77ofkk", "spec": "adios2%gcc@9.1.0~python ^cuda@11.0.3" }, { - "hash": "owxngdvfmzuxujlk2n5blmrmiwrlc5xy", + "hash": "pjycmpgyfhqahjs34w2zhzyptsa5fsrd", "spec": "adios2%gcc@9.3.0~python ^cuda@11.0.3" }, { @@ -469,15 +473,15 @@ "spec": "nco%gcc@9.3.0 ^cuda@11.0.3" }, { - "hash": "c7x4slcjbrb5akttixeyfil5asxygkc6", + "hash": "zqqdena4zhbjpazqqno234vvjqboxb7y", "spec": "adios2@2.7.1%gcc@8.3.1~python ^cuda@11.0.3" }, { - "hash": "qqtqpk4zj5e34yfsmuj4w4yyiky3yn6a", + "hash": "wed7etdcj42brp53imokce34xh77ofkk", "spec": "adios2@2.7.1%gcc@9.1.0~python ^cuda@11.0.3" }, { - "hash": "owxngdvfmzuxujlk2n5blmrmiwrlc5xy", + "hash": "pjycmpgyfhqahjs34w2zhzyptsa5fsrd", "spec": "adios2@2.7.1%gcc@9.3.0~python ^cuda@11.0.3" }, { @@ -709,15 +713,15 @@ "spec": "magma@2.5.4%gcc@9.3.0 ^cuda@11.0.3" }, { - "hash": "qopghptl4twx45bf7bqhh4lsl26f2mmn", + "hash": "bg4w3qxw57m6ktlyhjeswixpsxmaw5xs", "spec": "mercury@1.0.1%gcc@8.3.1 ^cuda@11.0.3" }, { - "hash": "mrirv6eg6xwupvj5nz7nv3xhp7iftkq2", + "hash": "v25qiejxptfdvjacx7kqdlsmxz6bps4z", "spec": "mercury@1.0.1%gcc@9.1.0 ^cuda@11.0.3" }, { - "hash": "rqne27obcgmyjzvwjgwrldbkal2y5c22", + "hash": "fjjufegp266tragf3hffncj7kqmi5s2l", "spec": "mercury@1.0.1%gcc@9.3.0 ^cuda@11.0.3" }, { @@ -745,15 +749,15 @@ "spec": "ninja@1.10.1%gcc@9.3.0 ^cuda@11.0.3" }, { - "hash": "v6h6fqtrx772wwvdqwdmbd6qr4rso3hw", + "hash": "rlnb6wscijm2iskcs2ndwxnppii6nlbb", "spec": "openpmd-api@0.12.0%gcc@8.3.1 ^cuda@11.0.3" }, { - "hash": "wx2biiobvkncsxrnngtm5lubxoupoq35", + "hash": "j2j3gummfkeddpbzqtpksfxeaoglada7", "spec": "openpmd-api@0.12.0%gcc@9.1.0 ^cuda@11.0.3" }, { - "hash": "p5t2rtvjsg445hyednpz5gvgqjjkpefq", + "hash": "el7rpy7fo3gkzkjhpwx7zvflw4ox65cy", "spec": "openpmd-api@0.12.0%gcc@9.3.0 ^cuda@11.0.3" }, { @@ -985,16 +989,52 @@ "spec": "tasmanian@7.3%gcc@9.3.0 ^cuda@11.0.3" }, { - "hash": "jp66o46fev4aomacf3yxjmte3m7j3svq", - "spec": "tau@2.29.1%gcc@8.3.1+cuda ^cuda@11.0.3" + "hash": "hu7qy3xwnhyxhfsh54lwynfm2zjmi3tq", + "spec": "tau@2.29.1%gcc@8.3.1~cuda+mpi+ompt~openmp ^cuda@11.0.3 ^papi~cuda" + }, + { + "hash": "k6ho6orqrnmmr5ofwdukmpqajrtleshl", + "spec": "tau@2.29.1%gcc@9.1.0~cuda+mpi+ompt~openmp ^cuda@11.0.3 ^papi~cuda" + }, + { + "hash": "qpfntqzitv43lh3obg6rnslzflp4l7vu", + "spec": "tau@2.29.1%gcc@9.3.0~cuda+mpi+ompt~openmp ^cuda@11.0.3 ^papi~cuda" + }, + { + "hash": "eue5lduwhtqz264yfnsgwns2rozudv62", + "spec": "tau@2.29.1%gcc@8.3.1~cuda+mpi+ompt+openmp ^cuda@11.0.3 ^papi~cuda" + }, + { + "hash": "izk3utvosr4s6ww73f5xau6ixsnzfi6o", + "spec": "tau@2.29.1%gcc@9.1.0~cuda+mpi+ompt+openmp ^cuda@11.0.3 ^papi~cuda" + }, + { + "hash": "mapppsietuw2rlqrjxeg7lnq7wta2c6c", + "spec": "tau@2.29.1%gcc@9.3.0~cuda+mpi+ompt+openmp ^cuda@11.0.3 ^papi~cuda" + }, + { + "hash": "m7f2jkp3ihbg4hxmv75ou3zt7ebozg6p", + "spec": "tau@2.29.1%gcc@8.3.1+cuda+mpi+ompt~openmp ^cuda@11.0.3" }, { - "hash": "koabodqfh6ghfjzchb35c3fqmfiocgna", - "spec": "tau@2.29.1%gcc@9.1.0+cuda ^cuda@11.0.3" + "hash": "inydee2w4fralikrogu5vuuwtibm52mz", + "spec": "tau@2.29.1%gcc@9.1.0+cuda+mpi+ompt~openmp ^cuda@11.0.3" }, { - "hash": "66hfqndyyeoae65jmla5rwh2s7flqzef", - "spec": "tau@2.29.1%gcc@9.3.0+cuda ^cuda@11.0.3" + "hash": "bhqhofal2d4yhbdg6gyfzicb4722ad4v", + "spec": "tau@2.29.1%gcc@9.3.0+cuda+mpi+ompt~openmp ^cuda@11.0.3" + }, + { + "hash": "6qyrtpxtoagcottxw5jahzj2oxngxvaw", + "spec": "tau@2.29.1%gcc@8.3.1+cuda+mpi+ompt+openmp ^cuda@11.0.3" + }, + { + "hash": "jnydlafy4x3bn4reht4nbacj3657y4b4", + "spec": "tau@2.29.1%gcc@9.1.0+cuda+mpi+ompt+openmp ^cuda@11.0.3" + }, + { + "hash": "ysujhsunp7hozlkotod7hk4aaxjkuzkp", + "spec": "tau@2.29.1%gcc@9.3.0+cuda+mpi+ompt+openmp ^cuda@11.0.3" }, { "hash": "inxqex3kp5hmvmt2soeobpsnoapuphol", @@ -1069,15 +1109,15 @@ "spec": "zfp@0.5.5%gcc@9.3.0 ^cuda@11.0.3" }, { - "hash": "c7x4slcjbrb5akttixeyfil5asxygkc6", + "hash": "zqqdena4zhbjpazqqno234vvjqboxb7y", "spec": "adios2@2.7.1%gcc@8.3.1~python ^cuda@11.0.3" }, { - "hash": "qqtqpk4zj5e34yfsmuj4w4yyiky3yn6a", + "hash": "wed7etdcj42brp53imokce34xh77ofkk", "spec": "adios2@2.7.1%gcc@9.1.0~python ^cuda@11.0.3" }, { - "hash": "owxngdvfmzuxujlk2n5blmrmiwrlc5xy", + "hash": "pjycmpgyfhqahjs34w2zhzyptsa5fsrd", "spec": 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"hash": "cz4zw6qrh67qqanmczxqwb64fkoso7uw" + } + }, "edhov2lasyvrjpw6kiewb6jzs56nsytj": { "py-toml": { "version": "0.10.2", @@ -76279,7 +79650,7 @@ "hash": "pf3catwfd2ebbabiciy4joltqvvs2roz" } }, - "cmqtvzgfi4rkmntj2xwy2xrhu3yjolrr": { + "umhr45osk5h3jiq3rsivydjeyduw4clr": { "mercury": { "version": "2.0.1", "arch": { @@ -76327,14 +79698,14 @@ ] }, "libfabric": { - "hash": "yqgvk3orzx5x466b22jvpkn36htty6ce", + "hash": "elpbhgezxwh3lqbpvv2nevpgos7ywzuk", "type": [ "build", "link" ] } }, - "hash": "malw77z3jl5jslf5fjlvz4togsq5qjsq" + "hash": "5kbtkk2c7kyqn7wxx6sdqk7tst7pt2ps" } }, "sqg4zaxh7x4wms2cq6lawwnc46fyt5kg": { @@ -76826,7 +80197,7 @@ "hash": "4k3v7xbdiilgqsfiqgrwa53rfe7fnjej" } }, - "p4sg2xsdtrbndwo6zcddw6e6uogc7ypg": { + "6qq6uvlhm6fdx5kirpu26z3d7rlpibse": { "openpmd-api": { "version": "0.13.4", "arch": { @@ -76857,7 +80228,7 @@ }, "dependencies": { "adios2": { - "hash": "6fy2jdnfl6y255hrygsfn5kgqrq2pczx", + "hash": "mloysch74ecrlkt3xznwwyv2qlhvtvhh", "type": [ "build", "link" @@ -76898,7 +80269,7 @@ ] } }, - "hash": "4icwhtqutabbsphhdzzyhadkr2j3hbz7" + "hash": "x2g3ru2dkz72visvlgmf2ksbdppg4wps" } }, "aomdcbibo2uub54c2vo5urtyojhs3dmz": { @@ -77794,6 +81165,51 @@ "hash": "3ipotndqt45knbg4i6faugqgdo2blfjo" } }, + "6wcmj7bmgxgujqswrlq3paeqofpohm7l": { + "bison": { + "version": "3.7.6", + "arch": { + "platform": "linux", + "platform_os": "rhel8", + "target": "ppc64le" + }, + "compiler": { + "name": "gcc", + "version": "11.1.0" + }, + "namespace": "builtin", + "parameters": { + "cflags": [], + "cppflags": [], + "cxxflags": [], + "fflags": [], + "ldflags": [], + "ldlibs": [] + }, + "dependencies": { + "diffutils": { + "hash": "qc5gcck42vvgxk4bfhtwx4r6qashxocm", + "type": [ + "build" + ] + }, + "m4": { + "hash": "qyi5fz72k4tcb6s27nmmffwpeyx35vgx", + "type": [ + "build", + "run" + ] + }, + "perl": { + "hash": "fwev62ujeuzdtsieksip6um2hyg7g2hy", + "type": [ + "build" + ] + } + }, + "hash": "gzpq7cewzjghsdeb7kljpjdeze2vy4yb" + } + }, "sixfn2bmf7pvme4xcsh6gxy3phrtt2xi": { "umap": { "version": "2.1.0", @@ -84961,9 +88377,9 @@ "hash": "tvb3hwozw6vwe7u3qamjzwph6c2rttnh" } }, - "fdmjhbhc3xfp4ufu3yhibnr5vy3ohsyh": { - "libfabric": { - "version": "1.12.1", + "rucchppqoqp7jf2irm233h6q523wpzvf": { + "darshan-runtime": { + "version": "3.2.1", "arch": { "platform": "linux", "platform_os": "rhel8", @@ -84973,16 +88389,22 @@ "name": "gcc", "version": "8.3.1" }, - "namespace": "builtin", + "namespace": "olcf", "parameters": { - "fabrics": [ - "rxm", - "sockets", - "tcp", - "udp", - "verbs" + "apmpi": false, + "apmpi_sync": false, + "apxc": false, + "cobalt": false, + "grouplogs": true, + "hdf5": false, + "logpath": "/gpfs/alpine/darshan/summit", + "lsf": true, + "mpi": true, + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" ], - "kdreg": false, + "pbs": false, + "slurm": false, "cflags": [], "cppflags": [], "cxxflags": [], @@ -84990,21 +88412,31 @@ "ldflags": [], "ldlibs": [] }, + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" + ], "dependencies": { - "rdma-core": { - "hash": "bfkzl4h2tixtasgtudefflbyddhw7ujm", + "spectrum-mpi": { + "hash": "lh62ywknl2livekopzhdwkylukd4pf2z", + "type": [ + "build", + "link" + ] + }, + "zlib": { + "hash": "ftuul4p4uvob246pxgk3hvfgqskovhoo", "type": [ "build", "link" ] } }, - "hash": "fdmjhbhc3xfp4ufu3yhibnr5vy3ohsyh" + "hash": "rucchppqoqp7jf2irm233h6q523wpzvf" } }, - "bfkzl4h2tixtasgtudefflbyddhw7ujm": { - "rdma-core": { - "version": "system", + "b2dbc7asmozcyaodhwlee4qnhpwmxrlr": { + "darshan-runtime": { + "version": "3.2.1", "arch": { "platform": "linux", "platform_os": "rhel8", @@ -85014,10 +88446,22 @@ "name": "gcc", "version": "8.3.1" }, - "namespace": "builtin", + "namespace": "olcf", "parameters": { - "build_type": "RelWithDebInfo", - "ipo": false, + "apmpi": false, + "apmpi_sync": false, + "apxc": false, + "cobalt": false, + "grouplogs": true, + "hdf5": true, + "logpath": "/gpfs/alpine/darshan/summit", + "lsf": true, + "mpi": true, + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" + ], + "pbs": false, + "slurm": false, "cflags": [], "cppflags": [], "cxxflags": [], @@ -85025,12 +88469,154 @@ "ldflags": [], "ldlibs": [] }, - "external": { - "path": "/usr", - "module": null, - "extra_attributes": {} + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" + ], + "dependencies": { + "hdf5": { + "hash": "pocgbu3mihpnxgxdpeednntcbhakhctl", + "type": [ + "build", + "link" + ] + }, + "spectrum-mpi": { + "hash": "lh62ywknl2livekopzhdwkylukd4pf2z", + "type": [ + "build", + "link" + ] + }, + "zlib": { + "hash": "ftuul4p4uvob246pxgk3hvfgqskovhoo", + "type": [ + "build", + "link" + ] + } }, - "hash": "bfkzl4h2tixtasgtudefflbyddhw7ujm" + "hash": "fysfzwekjvdlueyxe6pjxodxwuzybsta" + } + }, + "foy76v6kypdpepgs4nmahubhm2yfwmka": { + "darshan-runtime": { + "version": "3.3.0", + "arch": { + "platform": "linux", + "platform_os": "rhel8", + "target": "ppc64le" + }, + "compiler": { + "name": "gcc", + "version": "8.3.1" + }, + "namespace": "olcf", + "parameters": { + "apmpi": false, + "apmpi_sync": false, + "apxc": false, + "cobalt": false, + "grouplogs": true, + "hdf5": false, + "logpath": "/gpfs/alpine/darshan/summit", + "lsf": true, + "mpi": true, + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" + ], + "pbs": false, + "slurm": false, + "cflags": [], + "cppflags": [], + "cxxflags": [], + "fflags": [], + "ldflags": [], + "ldlibs": [] + }, + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" + ], + "dependencies": { + "spectrum-mpi": { + "hash": "lh62ywknl2livekopzhdwkylukd4pf2z", + "type": [ + "build", + "link" + ] + }, + "zlib": { + "hash": "ftuul4p4uvob246pxgk3hvfgqskovhoo", + "type": [ + "build", + "link" + ] + } + }, + "hash": "foy76v6kypdpepgs4nmahubhm2yfwmka" + } + }, + "kc4qh4hsgfdkql5w5e34wwpdc2dovemw": { + "darshan-runtime": { + "version": "3.3.0", + "arch": { + "platform": "linux", + "platform_os": "rhel8", + "target": "ppc64le" + }, + "compiler": { + "name": "gcc", + "version": "8.3.1" + }, + "namespace": "olcf", + "parameters": { + "apmpi": false, + "apmpi_sync": false, + "apxc": false, + "cobalt": false, + "grouplogs": true, + "hdf5": true, + "logpath": "/gpfs/alpine/darshan/summit", + "lsf": true, + "mpi": true, + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" + ], + "pbs": false, + "slurm": false, + "cflags": [], + "cppflags": [], + "cxxflags": [], + "fflags": [], + "ldflags": [], + "ldlibs": [] + }, + "patches": [ + "efe278f618b00735c814660b980dbedcb397965909e649b81a904b12c48288d8" + ], + "dependencies": { + "hdf5": { + "hash": "pocgbu3mihpnxgxdpeednntcbhakhctl", + "type": [ + "build", + "link" + ] + }, + "spectrum-mpi": { + "hash": "lh62ywknl2livekopzhdwkylukd4pf2z", + "type": [ + "build", + "link" + ] + }, + "zlib": { + "hash": "ftuul4p4uvob246pxgk3hvfgqskovhoo", + "type": [ + "build", + "link" + ] + } + }, + "hash": "jez4npxjizrvm464s4c5ujoaugstncay" } } } diff --git a/hosts/summit/envs/base/spack.yaml b/hosts/summit/envs/base/spack.yaml index 34f7cb69..52e5151c 100644 --- a/hosts/summit/envs/base/spack.yaml +++ b/hosts/summit/envs/base/spack.yaml @@ -66,15 +66,19 @@ spack: - hpcviewer@2021.03 - cube@4.6+gui - googletest + - imagemagick - core_only_compute_packages: - - darshan-runtime@3.2.1 - - darshan-runtime@3.3.0 + - darshan-runtime@3.2.1~hdf5 + - darshan-runtime@3.2.1+hdf5 + - darshan-runtime@3.3.0~hdf5 + - darshan-runtime@3.3.0+hdf5 - scorep@7.0+mpi+papi - valgrind ~ubsan+mpi+boost - adios2 +python ^python@3.7.7 + - adios@1.13.1+blosc+bzip2+fortran+hdf5+infiniband+netcdf - gdrcopy - - gromacs +hwloc+cuda+mpi ^cuda@10.2.89 - - gromacs +hwloc+cuda~mpi ^cuda@10.2.89 + - gromacs +hwloc+cuda+mpi ^cuda@10.2.89 + - gromacs +hwloc+cuda~mpi ^cuda@10.2.89 - gromacs@2020.4 +hwloc+cuda+mpi ^cuda@10.2.89 - gromacs@2020.4 +hwloc+cuda~mpi ^cuda@10.2.89 - gromacs@2020.2 +hwloc+cuda+mpi ^cuda@10.2.89 @@ -154,7 +158,10 @@ spack: - swig@4.0.2 - sz@2.1.10 - tasmanian@7.3 - - tau@2.29.1+cuda + - tau@2.29.1~cuda+mpi+ompt~openmp ^papi~cuda + - tau@2.29.1~cuda+mpi+ompt+openmp ^papi~cuda + - tau@2.29.1+cuda+mpi+ompt~openmp + - tau@2.29.1+cuda+mpi+ompt+openmp - trilinos@13.0.0 # - turbine@1.2.3 - umap@2.1.0 @@ -225,7 +232,10 @@ spack: - swig@4.0.2-fortran - sz@2.1.11.1 - tasmanian@7.3 - - tau@2.30.1+cuda + - tau@2.30.1~cuda+mpi+ompt~openmp ^papi~cuda + - tau@2.30.1~cuda+mpi+ompt+openmp ^papi~cuda + - tau@2.30.1+cuda+mpi+ompt~openmp + - tau@2.30.1+cuda+mpi+ompt+openmp - trilinos@13.0.1 # - turbine@1.2.3 - umap@2.1.0 @@ -305,7 +315,10 @@ spack: - swig@4.0.2-fortran - sz@2.1.11.1 - tasmanian@7.5 - - tau@2.30.1+cuda + - tau@2.30.1~cuda+mpi+ompt~openmp ^papi~cuda + - tau@2.30.1~cuda+mpi+ompt+openmp ^papi~cuda + - tau@2.30.1+cuda+mpi+ompt~openmp + - tau@2.30.1+cuda+mpi+ompt+openmp - trilinos@13.0.1 - turbine@1.3.0 - umap@2.1.0 @@ -400,7 +413,10 @@ spack: - superlu-dist+cuda - slate+cuda - tasmanian+cuda - - tau+cuda + - tau~cuda+mpi+ompt~openmp ^papi~cuda + - tau~cuda+mpi+ompt+openmp ^papi~cuda + - tau+cuda+mpi+ompt~openmp + - tau+cuda+mpi+ompt+openmp - umpire+cuda - upcxx+cuda - slate@2020.10.00 # broken custom ICL BLASFinder.cmake macro >:( @@ -455,6 +471,10 @@ spack: - mpip - adios2+zpf - netlib-lapack + - matrix: + - - netlib-lapack + - - $xl_compilers + - - ^cmake%gcc@8-os - nv_specs: - matrix: - - $general_compute_packages @@ -770,7 +790,7 @@ spack: providers: {} compiler: [] darshan-runtime: - variants: +lsf+hdf5+grouplogs logpath=/gpfs/alpine/darshan/summit + variants: +lsf+grouplogs logpath=/gpfs/alpine/darshan/summit buildable: true version: [] target: [] @@ -845,6 +865,15 @@ spack: environment_blacklist: [] load: [] conflict: [] + darshan-runtime: + suffixes: + darshan-runtime~hdf5: lite + filter: + environment_blacklist: [] + conflict: [] + load: [] + environment: + unset: [] gromacs: suffixes: gromacs ~mpi: serial @@ -884,6 +913,18 @@ spack: load: [] environment: unset: [] + tau: + suffixes: + tau~cuda: no_cuda + tau~openmp: no_omp + # tau+cuda: cuda + # tau+openmp: omp + filter: + environment_blacklist: [] + load: [] + environment: + unset: [] + conflict: [] pcre: suffixes: pcre+jit: jit @@ -1088,13 +1129,16 @@ spack: projections: {} core_specs: - adios2%gcc@8.3.1 + - adios@1.13.1%gcc@8.3.1 - magma@2.5.3%gcc@8.3.1 ^cuda@11.0.3 - gromacs%gcc@8.3.1+mpi - gromacs%gcc@8.3.1~mpi - amgx%gcc@8.3.1 ^cuda@10.2.89 - scorep@7.0%gcc@8.3.1+mpi+papi~pdt~shmem~unwind - - darshan-runtime@3.2.1%gcc@8.3.1 - - darshan-runtime@3.3.0%gcc@8.3.1 + - darshan-runtime@3.2.1%gcc@8.3.1+hdf5 + - darshan-runtime@3.2.1%gcc@8.3.1~hdf5 + - darshan-runtime@3.3.0%gcc@8.3.1+hdf5 + - darshan-runtime@3.3.0%gcc@8.3.1~hdf5 config: install_tree: root: ${FACSPACK_ENV}/opt diff --git a/hosts/summit/share/lmod/modulefiles/static/site/Core/DefApps.lua b/hosts/summit/share/lmod/modulefiles/static/site/Core/DefApps.lua index cb37de71..1c5d9ba5 100644 --- a/hosts/summit/share/lmod/modulefiles/static/site/Core/DefApps.lua +++ b/hosts/summit/share/lmod/modulefiles/static/site/Core/DefApps.lua @@ -9,5 +9,5 @@ load("xl") load("spectrum-mpi") load("lsf-tools") load("hsi") --- load("darshan-runtime") +try_load("darshan-runtime/3.3.0-lite") load("xalt") diff --git a/spack b/spack index 01a4e4ea..01de6f16 160000 --- a/spack +++ b/spack @@ -1 +1 @@ -Subproject commit 01a4e4ea85e969a531d0ddfaa7930b6c59d65bc3 +Subproject commit 01de6f165ea9c35573e56ca10c215a778e1dba70