From 5704acc781bfdafec56771ee2af456cd157f513f Mon Sep 17 00:00:00 2001
From: cm401 <christian.morgenstern@gmail.com>
Date: Sun, 24 Mar 2024 07:58:29 +0000
Subject: [PATCH 1/3] initial revision

---
 inst/extdata/lassa_articles.csv   | 201 ++++++++++++++++
 inst/extdata/lassa_models.csv     |  34 +++
 inst/extdata/lassa_outbreaks.csv  |  29 +++
 inst/extdata/lassa_parameters.csv | 379 ++++++++++++++++++++++++++++++
 4 files changed, 643 insertions(+)
 create mode 100644 inst/extdata/lassa_articles.csv
 create mode 100644 inst/extdata/lassa_models.csv
 create mode 100644 inst/extdata/lassa_outbreaks.csv
 create mode 100644 inst/extdata/lassa_parameters.csv

diff --git a/inst/extdata/lassa_articles.csv b/inst/extdata/lassa_articles.csv
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+id,covidence_id,pathogen,first_author_first_name,first_author_surname,article_title,doi,journal,year_publication,volume,issue,page_first,page_last,paper_copy_only,notes,qa_m1,qa_m2,qa_a3,qa_a4,qa_d5,qa_d6,qa_d7
+9f62e47ed45a53c1336e8e63d7d7f6cb,18,Lassa mammarenavirus,Webb,PA,"Lassa Fever In Children In Sierra-Leone, West-Africa",NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1986,80,4,577,582,FALSE,"Study in Children
+Seasonal cluster in April; May and August",Yes,No,NA,NA,Yes,No,No
+7f4b4528feba7ce6d3a5033854ea7a42,49,Lassa mammarenavirus,Van Der Waals,Fransje,Hemorrhagic-Fever Virus-Infections In An Isolated Rain-Forest Area Of Central Liberia - Limitations Of The Indirect Immunofluorescence Slide Test For Antibody Screening In Africa,NA,Tropical And Geographical Medicine,1986,38,3,209,214,TRUE,"Link with Epilepsy
+Considers several hemorrhagic fever viruses",Yes,Yes,NA,NA,No,No,No
+9da04c9c3464ba932aa82d2e4a0fb5ea,60,Lassa mammarenavirus,Tuite,Ashleigh,Potential For Seasonal Lassa Fever Case Exportation From Nigeria,10.4269/ajtmh.18-0753,American Journal Of Tropical Medicine And Hygiene,2019,100,3,647,651,FALSE,NA,NA,NA,NA,NA,Yes,Yes,NA
+93d3ee2b0b807525133000bdfb9e41f6,61,Lassa mammarenavirus,Troup,Jeanette,"An Outbreak Of Lassa Fever On Jos Plateau, Nigeria, In January-February 1970 - A Preliminary Report",10.4269/ajtmh.1970.19.695,American Journal Of Tropical Medicine And Hygiene,1970,19,4,695,696,FALSE,NA,No,No,NA,NA,Yes,No,No
+0e06f783f34b11ba33b1ab6f3d7c2d43,68,Lassa mammarenavirus,Tomori,Oyewale,Viral Hemorrhagic-Fever Antibodies In Nigerian Populations,NA,American Journal Of Tropical Medicine And Hygiene,1988,38,2,407,410,TRUE,Regional differences in serology as risk outcome significant.,Yes,Yes,NA,NA,No,No,No
+01164920772c52dcd07ce445ef103eae,74,Lassa mammarenavirus,Tobin,Ekaete,Lassa Fever In Nigeria: Insights Into Seroprevalence And Risk Factors In Rural Edo State: A Pilot Study,10.4103/2276-7096.162258,Journal Of Medicine In The Tropics,2015,17,2,51,55,FALSE,Dates of serosurvey not reported.,Yes,Yes,NA,NA,No,No,No
+6cc9cdeb7652ce2eeb78ae9df2a3efaa,79,Lassa mammarenavirus,Tignor,Gregory,"The Yellow-Fever Epidemic In Ethiopia, 1961-1962 - Retrospective Serological Evidence For Concomitant Ebola Or Ebola-Like Virus-Infection",NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1993,87,2,162,162,FALSE,Negative seroprevalence across regions in Ethiopia - extracted in aggregate,No,No,NA,NA,No,No,No
+59ed726111e716143c101513e5ee7a23,81,Lassa mammarenavirus,Tessier,S.F.,Viral Hemorrhagic-Fever Survey In Chobe (Botswana),10.1016/0035-9203(87)90462-7,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1987,81,4,699,700,TRUE,Negative seroprevalence in mixed village-hospital setting.,No,No,NA,NA,Yes,No,No
+d7e338066ff4d9487c15eceec2ee70bd,85,Lassa mammarenavirus,ter Meulen,J.,Hunting Of Peridomestic Rodents And Consumption Of Their Meat As Possible Risk Factors For Rodent-To-Human Transmission Of Lassa Virus In The Republic Of Guinea,NA,American Journal Of Tropical Medicine And Hygiene,1996,55,6,661,666,TRUE,NA,Yes,Yes,NA,NA,Yes,No,Yes
+13cdef32a7a9576e547c45ab06c3a4fe,88,Lassa mammarenavirus,ter Meulen,J.,Detection Of Lassa Virus Antinucleoprotein Immunoglobulin G (Igg) And Igm Antibodies By A Simple Recombinant Immunoblot Assay For Field Use,NA,Journal Of Clinical Microbiology,1998,36,11,3143,3148,FALSE,NA,Yes,Yes,NA,NA,Yes,No,No
+6ed59e28ccc2eef7c923b0d259231798,130,Lassa mammarenavirus,Sogoba,Nafomon,"Lassa Virus Seroprevalence In Sibirilia Commune, Bougouni District, Southern Mali",10.3201/eid2204.151814,Emerging Infectious Diseases,2016,22,4,657,663,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+39819a2a94765a2302e96fca8c7de0bd,152,Lassa mammarenavirus,Siddle,Katherine,Genomic Analysis Of Lassa Virus During An Increase In Cases In Nigeria In 2018,10.1056/NEJMoa1804498,New England Journal Of Medicine,2018,379,18,1745,1753,FALSE,"- Outbreak recorded as WHO classified as grade 2 public health emergency.
+- Some human to human transmission suspected from sequence data
+- Spatial separation (by major rivers) of prevalent linages of Lassa virus",NA,NA,NA,NA,Yes,NA,NA
+49eb024d2712105290dedd2dd5323c08,167,Lassa mammarenavirus,Shehu,Nathan Y,"Lassa Fever 2016 Outbreak In Plateau State, Nigeria-The Changing Epidemiology And Clinical Presentation",10.3389/fpubh.2018.00232,Frontiers In Public Health,2018,6,NA,NA,NA,FALSE,"Risk factors: Not significant: Occupation other: business; office workers; unemployed. Paper uses farmers; which I've listed as livestock and animal herder.
+",Yes,No,NA,NA,Yes,Yes,No
+db349967bcba352945dcb2e0643967ed,168,Lassa mammarenavirus,Sharp,P. C.,Lassa Fever In Children,NA,Journal Of Infection,1982,4,1,73,77,FALSE,NA,No,No,NA,NA,No,No,No
+0173b29dde27c00b828b19488e322c4e,174,Lassa mammarenavirus,Shaffer,Jeffrey,Lassa Fever In Post-Conflict Sierra Leone,10.1371/journal.pntd.0002748,Plos Neglected Tropical Diseases,2014,8,3,NA,NA,FALSE,"CFR of hosiptalised PCR confirmed cases
+Significantly more women than men presented at hospital but CFR difference not significant (page 7).
+Ribavirin treatment significantly reduces risk of death (page 8).",Yes,No,Yes,No,Yes,Yes,No
+317696920b8b6de528cdc360b74893a8,225,Lassa mammarenavirus,Salah,S.,A Negative Human Serosurvey Of Hemorrhagic-Fever Viruses In Djibouti,NA,Annales De L Institut Pasteur-Virology,1988,139,4,439,442,FALSE,"Multi-setting seroprevalence survey with soldiers, non-Lassa hospitalised and villagers",No,No,NA,NA,No,No,No
+5c36dc810c04252d3df604da1cbc657f,252,Lassa mammarenavirus,Roth,Prerana,Factors Associated With Mortality In Febrile Patients In A Government Referral Hospital In The Kenema District Of Sierra Leone,10.4269/ajtmh.14-0418,American Journal Of Tropical Medicine And Hygiene,2015,92,1,172,177,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+dc041d85c6bebf8cf54ce0a5144538d6,263,Lassa mammarenavirus,Rodrigues,FM,Serological Survey For The Detection Of Antibodies To Lassa Virus In India,NA,Journal Of The Indian Medical Association,1978,70,2,25,28,TRUE,NA,No,No,NA,NA,No,No,No
+23ea40c24afce22846f80c56d3062794,264,Lassa mammarenavirus,Rodhain,F,Arbovirus Infections And Viral Haemorrhagic Fevers In Uganda: A Serological Survey In Karamoja District 1984,NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1989,83,6,851,854,FALSE,NA,No,No,NA,NA,Yes,No,No
+ecf59a0248a980aa1a268346c172a28d,285,Lassa mammarenavirus,Redding,DW,Environmental-Mechanistic Modelling Of The Impact Of Global Change On Human Zoonotic Disease Emergence: A Case Study Of Lassa Fever,10.1111/2041-210X.12549,Methods In Ecology And Evolution,2016,7,6,646,655,FALSE,NA,Yes,Yes,Yes,Yes,Yes,No,No
+e5edb3a63c397372ab03de34ab1c00cf,307,Lassa mammarenavirus,Price,Michael E,A Prospective Study Of Maternal And Fetal Outcome In Acute Lassa Fever Infection During Pregnancy,NA,British Medical Journal,1988,297,6648,584,587,FALSE,NA,No,No,NA,NA,Yes,No,No
+bf4dd61880195d81c6aa3645fa15d341,351,Lassa mammarenavirus,Zweighaft,RM,Lassa Fever - Response To An Imported Case,NA,New England Journal Of Medicine,1977,297,15,803,807,TRUE,NA,No,No,NA,NA,Yes,No,No
+406d3472798ee4689fa6f80a474a4360,398,Lassa mammarenavirus,Woodruff,AW,Viral Infections In Travellers From Tropical Africa,NA,British Medical Journal,1978,1,6118,956,958,FALSE,NA,No,No,NA,NA,No,No,No
+012db9a4c08faeb314fd0b2227fd5859,416,Lassa mammarenavirus,White,H.,Lassa Fever - Study Of 23 Hospital Cases,NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1972,66,3,390,398,FALSE,NA,No,No,No,NA,Yes,No,No
+09d2b9e41b8dc6d4355418aa977bb9a5,441,Lassa mammarenavirus,Olugasa,Babasola,"The Rubber Plantation Environment And Lassa Fever Epidemics In Liberia, 2008-2012: A Spatial Regression",10.1016/j.sste.2014.04.005,Spatial And Spatio-Temporal Epidemiology,2014,11,NA,163,74,FALSE,NA,Yes,Yes,NA,Yes,Yes,Yes,No
+85033603c55eaa99b2249a26805290b6,444,Lassa mammarenavirus,Oloniniyi,Olamide,Genetic Characterization Of Lassa Virus Strains Isolated From 2012 To 2016 In Southeastern Nigeria,10.1371/journal.pntd.0006971,Plos Neglected Tropical Diseases,2018,12,11,NA,NA,FALSE,NA,Yes,Yes,Yes,No,Yes,Yes,No
+14ee33e11d549c2ce26e0caa05dd4858,461,Lassa mammarenavirus,Okokhere,Peter,Clinical And Laboratory Predictors Of Lassa Fever Outcome In A Dedicated Treatment Facility In Nigeria: An Observational Cohort Study,10.1016/S1473-3099(18)30121-X,Lancet Infectious Diseases,2018,18,5,684,695,FALSE,NA,Yes,No,No,No,Yes,Yes,No
+e643a77d6e69510235af88fe79d9bfa3,545,Lassa mammarenavirus,Lukashevich,I.,Lassa Virus Activity In Guinea - Distribution Of Human Antiviral Antibody-Defined Using Enzyme-Linked-Immunosorbent-Assay With Recombinant Antigen,NA,Journal Of Medical Virology,1993,40,3,210,217,FALSE,NA,No,Yes,NA,NA,Yes,Yes,No
+a7ab005860fa1caba3ba17bae7c7ebb6,558,Lassa mammarenavirus,Lo Iacono,Giovanni,A Unified Framework For The Infection Dynamics Of Zoonotic Spillover And Spread,10.1371/journal.pntd.0004957,Plos Neglected Tropical Diseases,2016,10,9,NA,NA,FALSE,This paper has a plot for Rt in the supp; but I think this is using the generic ABM; rather than fitting to data.,Yes,Yes,Yes,Yes,Yes,Yes,No
+dc58ccb401238d09a9ba6452086ea3ac,560,Lassa mammarenavirus,Lo Iacono,Giovanni,Using Modelling To Disentangle The Relative Contributions Of Zoonotic And Anthroponotic Transmission: The Case Of Lassa Fever,10.1371/journal.pntd.0003398,Plos Neglected Tropical Diseases,2015,9,1,NA,NA,FALSE,Paper also gives median for Re; only reports maximum; not minimum. Most parameters are given in figures and are not fully extractable.,Yes,Yes,No,Yes,No,No,No
+b705e586dc705035b24d26a6fb9a7385,645,Lassa mammarenavirus,Knobloch,J.,Clinical Observations In 42 Patients With Lassa Fever,NA,Tropenmedizin Und Parasitologie,1980,31,4,389,398,FALSE,NA,No,No,Yes,Yes,Yes,Yes,No
+80f74d1d0413175d39f4ef00894321c1,652,Lassa mammarenavirus,Klempa,Boris,"Seroepidemiological Study Reveals Regional Co-Occurrence Of Lassa- And Hantavirus Antibodies In Upper Guinea, West Africa",10.1111/tmi.12045,Tropical Medicine And International Health,2013,18,3,366,371,FALSE,NA,Yes,Yes,Yes,Yes,Yes,No,No
+f3b641b98c7c31cd7c60b5b40f034fdd,661,Lassa mammarenavirus,Kerneis,Solen,Prevalence And Risk Factors Of Lassa Seropositivity In Inhabitants Of The Forest Region Of Guinea: A Cross-Sectional Study,10.1371/journal.pntd.0000548,Plos Neglected Tropical Diseases,2009,3,11,NA,NA,FALSE,NA,Yes,Yes,Yes,Yes,Yes,Yes,No
+bd87100e21aebe2d0a5d9e863ee7b9ef,669,Lassa mammarenavirus,Keenlyside,Richard,Case-Control Study Of Mastomys Natalensis And Humans In Lassa Virus-Infected Households In Sierra Leone,NA,American Journal Of Tropical Medicine And Hygiene,1983,32,4,829,837,FALSE,This paper reports overall positivity for either IgG OR IgM,No,No,Yes,Yes,No,No,No
+3e0be8c155601659f0e9c615d7a0af07,670,Lassa mammarenavirus,Keane,E,"Lassa Fever In Panguma-Hospital, Sierra-Leone, 1973-1976",NA,British Medical Journal,1977,1,6073,1399,1402,FALSE,"A brief summary of some epi features from a hospital population.
+Parameter IDs 4&5 are in men and non-pregnant women. Pregnant women specifically in parameter ids 6&7.",Yes,Yes,NA,NA,Yes,No,No
+3e2dbc3bb54c1e4e9dbc3a6f3ebe2243,678,Lassa mammarenavirus,Kafetzopoulou,L.E.,Metagenomic Sequencing At The Epicenter Of The Nigeria 2018 Lassa Fever Outbreak,10.1126/science.aau9343,Science,2019,363,6422,74,77,FALSE,Genomic study confirming no new variants.,Yes,Yes,Yes,Yes,Yes,Yes,Yes
+847a4366dd32006ad6d8fcbf9663476a,693,Lassa mammarenavirus,Johnson,E.D.,Hemorrhagic-Fever Virus Activity In Equatorial Africa - Distribution And Prevalence Of Filovirus Reactive Antibody In The Central-African-Republic,10.1016/0035-9203(93)90075-2,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1993,87,5,530,535,FALSE,Serosurvery of multiple HFVs but only a tiny number positive for Lassa,No,Yes,NA,NA,Yes,No,No
+c05798002a738bdd63d75d796a135372,696,Lassa mammarenavirus,Johnson,B.K.,Antibodies Against Hemorrhagic-Fever Viruses In Kenya Populations,10.1016/0035-9203(83)90216-x,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1983,77,5,731,733,FALSE,NA,No,No,NA,NA,No,No,No
+281c8656433ac081595ed5b586865e86,729,Lassa mammarenavirus,Ivanoff,B.,"Hemorrhagic-Fever In Gabon .1. Incidence Of Lassa, Ebola And Marburg Viruses In Haut-Ogooue",10.1016/0035-9203(82)90089-x,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1982,76,6,719,720,FALSE,NA,No,No,NA,NA,No,No,No
+c2b427ce0271b9f77f59132a763cf985,742,Lassa mammarenavirus,Gunther,Stephan,Antibodies To Lassa Virus Z Protein And Nucleoprotein Co-Occur In Human Sera From Lassa Fever Endemic Regions,10.1007/s004300100061,Medical Microbiology And Immunology,2001,189,4,225,229,FALSE,NA,Yes,No,NA,NA,No,No,No
+4922f266e32d24120aa52f5e6f4ac8d6,757,Lassa mammarenavirus,Grahn,A,Absence Of Nosocomial Transmission Of Imported Lassa Fever During Use Of Standard Barrier Nursing Methods,10.3201/eid2406.172097,Emerging Infectious Diseases,2018,24,6,972,977,FALSE,HCW contacts of a case imported to Sweden from Liberia,Yes,No,NA,NA,Yes,Yes,No
+0243341efb6db404776d7bced47be83b,773,Lassa mammarenavirus,Gonzalez,JP,Antibody Prevalence Against Haemorrhagic Fever Viruses In Randomized Representative Central African Populations,10.1016/S0923-2516(89)80112-8,Research In Virology,1988,140,4,319,332,FALSE,Think they've made a mistake in their table about number of positives - indicates 5 but then calc only uses 3. Not overly important given small numbers; but flagging in case anyone looks back at this.,Yes,No,NA,NA,Yes,No,No
+f8d73a4cf0d690616a47af76c306ee1c,799,Lassa mammarenavirus,Georges,AJ,Antibodies To Lassa And Lassa-Like Viruses In Man And Mammals In The Central African Republic,10.1016/0035-9203(85)90242-1,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1985,79,1,78,79,FALSE,NA,Yes,No,NA,NA,No,No,No
+efb15bb557943d996a14bbe398aa6b8f,832,Lassa mammarenavirus,Fraser,David W,"Lassa Fever In The Eastern Province Of Sierra Leone, 1970 - 1972: I. Epidemiologic Studies",10.4269/ajtmh.1974.23.1131,American Journal Of Tropical Medicine And Hygiene,1974,23,6,1131,1139,TRUE,NA,Yes,No,NA,NA,No,Yes,No
+452fe878a52a8036969508cf06d72d27,838,Lassa mammarenavirus,Frame,JD,Endemic Lassa Fever In Liberia. V. Distribution Of Lassa Virus Activity In Liberia: Hospital Staff Surveys,10.1016/0035-9203(84)90012-9,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1984,78,6,761,763,FALSE,NA,Yes,No,NA,NA,Yes,Yes,No
+5e7d20c0d0d52495025dc8a09f656096,840,Lassa mammarenavirus,Frame,JD,Endemic Lassa Fever In Liberia. Ii. Serological And Virological Findings In Hospital Patients,10.1016/0035-9203(84)90232-3,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1984,78,5,656,660,FALSE,"More information on number of cases at each hospital here but not given in an extractable format (e.g. need to do maths).
+Seroprevalence also not in readily extractible format; hence the parameter data entry being so sparse.",No,No,NA,NA,No,Yes,No
+369dd01f0a624a8e284ed68ed5347d7f,841,Lassa mammarenavirus,Frame,JD,Lassa Virus Antibodies In Hospital Personnel In Western Liberia,10.1016/0035-9203(79)90218-9,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1979,73,2,219,224,FALSE,NA,Yes,No,NA,NA,Yes,Yes,No
+2e4ff9c8065b9faadd3a386783fc93e3,842,Lassa mammarenavirus,Frame,John D.,"Lassa Fever, A New Virus Disease Of Man From West Africa .1. Clinical Description And Pathological Findings",NA,American Journal Of Tropical Medicine And Hygiene,1970,19,4,670,676,TRUE,First paper to name Lassa fever and describe initial outbreak.,No,No,NA,NA,No,NA,NA
+9c644bcef9290d8f7f6ac679801ec1b2,845,Lassa mammarenavirus,Frame,John,Clinical Features Of Lassa Fever In Liberia,NA,Reviews Of Infectious Diseases,1989,11,NA,783,789,FALSE,NA,No,Yes,Yes,Yes,Yes,Yes,Yes
+877ba20126431371f1dc0fcafca15cbd,854,Lassa mammarenavirus,Fisher-Hoch,S P,Review Of Cases Of Nosocomial Lassa Fever In Nigeria - The High Price Of Poor Medical-Practice,NA,British Medical Journal,1995,311,NA,857,859,FALSE,Suggestive of parenteral transmission (via needles; presumably shared and due to substandard medical standards as described in depth),No,No,NA,NA,Yes,Yes,No
+8d6faf917bbcba52c88bbc32b69c442b,870,Lassa mammarenavirus,Monson,Mark,"Endemic Lassa Fever In Liberia. I. Clinical And Epidemiological Aspects At Curran Lutheran Hospital, Zorzor, Liberia",NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1984,78,4,549,553,FALSE,Reports of miscarriages in pregnant LF survivors,No,No,No,No,Yes,Yes,No
+66213446c64b9b2209d5ca3182f75f87,871,Lassa mammarenavirus,Monson,Mark,Pediatric Lassa Fever: A Review Of 33 Liberian Cases,NA,American Journal Of Tropical Medicine And Hygiene,1987,36,2,408,415,TRUE,"Describes LF in children including fetal; infant and childhood LF. Presents ""swollen baby syndrome""; a poor prognostic indicator of LF-att mortality - CFR of 87% (5/6) for children with SBS. Also report miscarriage (100% fetal CFR) and neonatal deaths.",No,Yes,Yes,Yes,Yes,Yes,Yes
+363929db83a192487ee755aeb78234ad,873,Lassa mammarenavirus,Monath,T.P.,"A Hospital Epidemic Of Lassa Fever In Zorzor, Liberia, March - April 1972",NA,American Journal Of Tropical Medicine And Hygiene,1973,22,6,773,779,TRUE,Nosocomial epidemic. Serology tested for CF antibody but I couldn't figure out which classification this would be. 0/22 family contacts; 4/133 village members.,Yes,Yes,No,No,No,Yes,No
+9736e3b06a6f64dec16c8919ba6b6b48,874,Lassa mammarenavirus,Monath,Thomas,"Lassa Fever In Eastern Province Of Sierra Leone, 1970-1972 .2. Clinical Observations And Virological Studies On Selected Hospital Cases",NA,American Journal Of Tropical Medicine And Hygiene,1974,23,6,1140,1149,FALSE,Only death in a pregnant woman at the end of second trimester.,No,No,No,Yes,No,Yes,No
+b532584cc829943f3578dde34aed2fd2,920,Lassa mammarenavirus,McCormick,Joseph B.,Lassa Fever: Effective Therapy With Ribavirin,NA,New England Journal Of Medicine,1986,314,1,20,26,FALSE,Sig. RF for death (CFR) were viremia levels on admission; elevated serum AST; + timing of ribavirin treatment.  Non-sig RF for death and viremia (other) was treatment type. CFR disagg by treatment type; timing; and serum levels. Central CFR =untreated pts,Yes,No,No,No,Yes,Yes,Yes
+40a8d7b386c3f896cdd648fe9c612220,921,Lassa mammarenavirus,McCormick,Joseph B.,A Case-Control Study Of The Clinical Diagnosis And Course Of Lassa Fever,NA,Journal Of Infectious Diseases,1987,155,3,445,455,FALSE,NA,No,No,No,No,Yes,No,No
+8053eeae2c42401c08b2ba768fbb716b,941,Lassa mammarenavirus,Mathiot,Christian C.,Antibodies To Haemorrhagic Fever Viruses In Madagascar Populations,NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1989,83,3,407,409,TRUE,NA,No,No,NA,NA,No,No,No
+386ed51b365ba59e743b3e4b83bde542,1012,Lassa mammarenavirus,Emmerich,Petra,Strain-Specific Antibody Response To Lassa Virus In The Local Population Of West Africa,10.1016/j.jcv.2007.11.019,Journal Of Clinical Virology,2008,42,1,40,44,FALSE,Also has an overall seroprevalence estimate from all 960 samples across countries (9.2%). Goal of paper is to compare strain-specific detection by assay,Yes,No,NA,NA,No,No,No
+364c7701219a82380347adddb9bace5b,1033,Lassa mammarenavirus,Ehichioya,Deborah U.,"Hospital-Based Surveillance For Lassa Fever In Edo State, Nigeria, 2005-2008",10.1111/j.1365-3156.2012.03010.x,Tropical Medicine And International Health,2012,17,8,1001,1004,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+0f94ce4f9e4412effb3407bb26685a1a,1080,Lassa mammarenavirus,Dahmane,A,Constraints In The Diagnosis And Treatment Of Lassa Fever And The Effect On Mortality In Hospitalized Children And Women With Obstetric Conditions In A Rural District Hospital In Sierra Leone,10.1093/trstmh/tru009,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,2014,108,3,126,132,FALSE,"Study considering pregnant women & children
+effectiveness of ribavirin as treatment",Yes,No,NA,NA,Yes,Yes,No
+8b9eae26603fabaa7c46c0d0880e7035,1161,Lassa mammarenavirus,Carey,DE,"Lassa Fever - Epidemiological Aspects Of 1970 Epidemic, Jos, Nigeria",NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1972,66,3,402,408,FALSE,Describes outbreak with potential nosocomial transmission,NA,NA,NA,NA,No,No,No
+bd5e179ceac6d7d3a08d2686781dd8c8,1173,Lassa mammarenavirus,Isere,Elvis,Lessons Learnt From Epidemiological Investigation Of Lassa Fever Outbreak In A Southwest State Of Nigeria December 2015 To April 2016,10.1371%2Fcurrents.outbreaks.bc4396a6650d0ed1985d731583bf5ded,Plos Currents,2018,10,NA,NA,NA,FALSE,NA,Yes,No,NA,NA,Yes,Yes,NA
+492d3911497a4f807784c3d85d7cd131,1181,Lassa mammarenavirus,Inegbenebor,Ute,Prevention Of Lassa Fever In Nigeria,10.1016/j.trstmh.2009.07.008,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,2010,104,1,51,54,FALSE,"Survey asked people about burial practices but no statistical analysis of results.
+908 people inpatients included in retrospective study. 60 patients included in survey",Yes,No,NA,NA,Yes,No,No
+ee9a2b7c5f5092606151f83de44d102f,1183,Lassa mammarenavirus,Ilori,Elsie,"Increase In Lassa Fever Cases In Nigeria, January-March 2018",10.3201/eid2505.181247,Emerging Infectious Diseases,2019,25,5,1026,1027,FALSE,"CFRs based on confirmed and probable cases
+decrease in CFR from 2017 to 2018 particially attributable to significantly higher testing capacity",Yes,Yes,NA,NA,Yes,No,No
+c287635d5c04628324bbaae210d8feaf,1234,Lassa mammarenavirus,Henderson,B.E.,Lassa Fever - Virological And Serological Studies,NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1972,66,3,409,416,FALSE,"3 seroprevalence studies:
+(1) 712 missionaries across Africa
+(2) WHO treponematosis samples reanalysed for Lassa in Nigeria (Benue River area)
+(3) 281 sample from Nigera (Ibadan) from a tribe of cattle herders",No,No,NA,NA,No,No,No
+12480e4884ed73b65076b7ceea42f1a6,1235,Lassa mammarenavirus,Helmick,Charles,No Evidence For Increased Risk Of Lassa Fever Infection In Hospital Staff,10.1016/s0140-6736(86)92206-3,Lancet,1986,2,8517,1202,1205,FALSE,NA,No,No,NA,NA,Yes,Yes,No
+8fdea1afb902a4cfacf42853b8e222e6,1254,Lassa mammarenavirus,Hamblion,E.L.,The Challenges Of Detecting And Responding To A Lassa Fever Outbreak In An Ebola-Affected Setting,10.1016/j.ijid.2017.11.007,International Journal Of Infectious Diseases,2018,66,NA,65,73,FALSE,NA,Yes,No,NA,NA,Yes,Yes,No
+3f8d488ad99d280827890d24376d99f2,1266,Lassa mammarenavirus,Bukbuk,David,"Development And Validation Of Serological Assays For Viral Hemorrhagic Fevers And Determination Of The Prevalence Of Rift Valley Fever In Borno State, Nigeria",10.1093/trstmh/tru163,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,2014,108,12,768,773,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+26839290fc754199f5fb8287714a2689,1272,Lassa mammarenavirus,Buba,Maryam,Mortaliy Among Confirmed Lassa Fever Cases During The 2015-2016 Outbreak In Nigeria,10.2105/AJPH.2017.304186,American Journal Of Public Health,2018,108,2,262,264,FALSE,NA,Yes,Yes,NA,NA,Yes,No,No
+2c298b19cc69c9ac1aeedf4b8178f350,1310,Lassa mammarenavirus,Bowen,G.S.,"Lassa Fever In Onitsha, East Central State, Nigeria, In 1974",NA,Bulletin Of The World Health Organization,1975,52,NA,599,604,FALSE,NA,No,No,NA,NA,No,No,No
+44a24f3247ecc8b57a3f5eb494d61aad,1328,Lassa mammarenavirus,Bonner,Phillip,Poor Housing Quality Increases Risk Of Rodent Infestation And Lassa Fever In Refugee Camps Of Sierra Leone,10.4269/ajtmh.2007.77.169,American Journal Of Tropical Medicine And Hygiene,2007,77,1,169,175,FALSE,Individuals under study are refugees in camps. The CFR (parameter ID14) is based on suspected cases only. The infection risk factors actually pertain to the occurrence of LASV in a household in a case-control study.,Yes,No,NA,NA,Yes,Yes,No
+f853b150f2bd62e070a363fb1fb10150,1343,Lassa mammarenavirus,Bloch,A,Serological Survey Of Lassa Fever In Liberia,NA,Bulletin Of The World Health Organization,1978,56,5,811,813,FALSE,NA,No,No,NA,NA,Yes,No,No
+28e816d95022a467c630f5b9d3d7ccdc,1368,Lassa mammarenavirus,Bausch,Daniel G,Lassa Fever In Guinea: I. Epidemiology Of Human Disease And Clinical Observations,10.1089/15303660160025903,Vector-Borne And Zoonotic Diseases,2001,1,4,269,279,FALSE,Risk factor is religion; but this is acknowleged as likely to be confounded with geographic region. AN odd risk factor that should probably be excluded; but I've extracted it in case.,Yes,Yes,No,No,Yes,Yes,No
+0bd38d21cdb15df1cec05bd98bfb2917,1386,Lassa mammarenavirus,Bajani,M. D.,A Survey For Antibodies To Lassa Virus Among Health Workers In Nigeria,10.1016/s0035-9203(97)90247-9,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1997,91,4,379,381,FALSE,"Risk factor: Sample size is 552-195=357; blank since not stated explicitly in the text. 
+Compares ward aid; doctor; nurse to ref group (Cleaner Laboratory staff; Laundry staff; & Others). All are hospital based; distinction = patient interaction.",Yes,Yes,NA,NA,Yes,No,No
+08f1d841f35f85fe53aeef50919e9974,1410,Lassa mammarenavirus,Atangana,Abdon,A Novel Model For The Lassa Hemorrhagic Fever: Deathly Disease For Pregnant Women,10.1007/s00521-015-1860-9,Neural Computing & Applications,2015,26,8,1895,1903,FALSE,"Model: SIRD
+Model doesn't make sense.",No,No,No,No,NA,NA,NA
+62761cb33833602c1d1d4cecfdc3fea8,1413,Lassa mammarenavirus,Asogun,Danny A,"Molecular Diagnostics For Lassa Fever At Irrua Specialist Teaching Hospital, Nigeria: Lessons Learnt From Two Years Of Laboratory Operation",10.1371/journal.pntd.0001839,Plos Neglected Tropical Diseases,2012,6,9,NA,NA,FALSE,"RF death - age sample size: 108 +60
+RF infection - other: geographic region",Yes,Yes,No,No,Yes,Yes,Yes
+d589f643daac36d48b664c5155dd4629,1426,Lassa mammarenavirus,Andersen,Kristian G.,Clinical Sequencing Uncovers Origins And Evolution Of Lassa Virus,10.1016/j.cell.2015.07.020,Cell,2015,162,4,738,750,FALSE,evolutionary mutation rate in Figure 2F,Yes,Yes,Yes,Yes,Yes,Yes,Yes
+d2ecc47171bdd43a29fed1a9e927fe9f,1433,Lassa mammarenavirus,Allan,Richard,The Progression From Endemic To Epidemic Lassa Fever In War-Torn West Africa,NA,Factors In The Emergence And Control Of Rodent-Borne Viral Diseases,1999,NA,NA,197,205,TRUE,From a book: Emergence and control of rodent-borne viral diseases (hantaviral and arenal diseases) - Jean Franois Saluzzo et al.,No,No,No,No,No,No,No
+6e33abaceb1f0f9db416faec8fee5021,1444,Lassa mammarenavirus,Akhuemokhan,OC,Prevalence Of Lassa Virus Disease (Lvd) In Nigerian Children With Fever Or Fever And Convulsions In An Endemic Area,10.1371/journal.pntd.0005711,Plos Neglected Tropical Diseases,2017,11,7,NA,NA,FALSE,Also have prevalence of LF out of children presenting with febrile illness at this hospital.,Yes,No,Yes,Yes,Yes,Yes,Yes
+f14b287ccc8da2a837c4d9d3ae2b3394,1447,Lassa mammarenavirus,Ajayi,N.A.,"Containing A Lassa Fever Epidemic In A Resource-Limited Setting: Outbreak Description And Lessons Learned From Abakaliki, Nigeria (January - March 2012)",10.1016/j.ijid.2013.05.015,International Journal Of Infectious Diseases,2013,17,11,NA,NA,FALSE,NA,Yes,Yes,Yes,Yes,Yes,Yes,No
+1ce071593b7e4f70be654803280e7dcc,2008,Lassa mammarenavirus,Johnson,BK,"Viral Haemorrhagic Fever Surveillance In Kenya, 1980-1981",NA,Tropical And Geographical Medicine,1983,35,1,43,47,TRUE,NA,Yes,No,NA,NA,No,Yes,No
+3de52119e82fafaa413c61632e4d9dfa,2114,Lassa mammarenavirus,Cooper,CB,A Case Of Lassa Fever: Experience At St Thomas's Hospital,10.1136/bmj.285.6347.1003,British Medical Journal,1982,285,NA,1003,1005,FALSE,NA,No,No,NA,NA,Yes,No,No
+cf8d3b6b0848dc23782fe6d3ca607428,2133,Lassa mammarenavirus,Yalley-Ogunro,JE,"Endemic Lassa Fever In Liberia. Vi. Village Serological Surveys For Evidence Of Lassa Virus Activity In Lofa County, Liberia",10.1016/0035-9203(84)90013-0,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1984,78,6,764,770,FALSE,NA,No,No,NA,NA,Yes,No,No
+962083e7dc2c57a8a929a64c2d8a6752,2151,Lassa mammarenavirus,Arnold,Richard,"A Neutralization Test Survey For Lassa Fever Activity In Lassa, Nigeria",NA,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1977,71,2,152,154,FALSE,Multi-setting seroprevalence surveys at two time points. The risk factor for being infected is based on PRNT serology.,Yes,No,NA,NA,Yes,No,No
+ac06741294519d8c4c9e4c76edcfd605,2254,Lassa mammarenavirus,Fabiyi,A.,Use Of The Complement Fixation (Cf) Test In Lassa Fever Surveillance. Evidence For Persistent Cf Antibodies.,NA,Bulletin Of The World Health Organization,1975,52,NA,605,608,FALSE,Mixed-setting serostudy.,No,No,NA,NA,No,No,No
+97c95e21d7cbccd877ea64a639fa1457,2293,Lassa mammarenavirus,Emmerich,Petra,Reverse Elisa For Igg And Igm Antibodies To Detect Lassa Virus Infections In Africa.,10.1016/j.jcv.2006.08.015,Journal Of Clinical Virology,2006,37,4,277,281,FALSE,NA,Yes,Yes,NA,NA,No,No,No
+058191215dbb0ec7e5e8c5c9f86f6181,2567,Lassa mammarenavirus,Yaro,Clement,"Infection Pattern, Case Fatality Rate And Spread Of Lassa Virus In Nigeria.",10.1186/s12879-021-05837-x,Bmc Infectious Diseases,2021,21,1,NA,NA,FALSE,"Reports on seasonal pattern.
+Based on NCDC data.",Yes,No,NA,NA,Yes,No,No
+045d93c8a76e88ee9edaccc10845db4f,2578,Lassa mammarenavirus,Musa,Salihu S.,Unravelling The Dynamics Of Lassa Fever Transmission With Differential Infectivity: Modeling Analysis And Control Strategies.,10.3934/mbe.2022613,Mathematical Biosciences And Engineering,2022,19,12,13114,13136,FALSE,Model fitted to Nigerian CDC data but does not report any parameters from that fit.,Yes,No,Yes,Yes,No,No,No
+c11447f7b8b2ca38bea13de8e8494d6d,2579,Lassa mammarenavirus,Abdulkarim,Mohammed A.,"Epidemiology Of Lassa Fever And Factors Associated With Deaths, Bauchi State, Nigeria, 2015-2018.",10.3201/eid2604.190678,Emerging Infectious Diseases,2020,26,4,799,801,FALSE,Duration between care seeking and onset of symptoms (bigger than 7 days) significant risk factor for death as outcome. Similarly duration between care seeking and any bleeding episode (more than 24h) significant risk factor for death as outcome.,Yes,Yes,NA,NA,Yes,No,No
+3e23fca0ea0c6a79430d87644ca0cb5d,2585,Lassa mammarenavirus,Dalhat,Mahmood M.,"Epidemiological Trends Of Lassa Fever In Nigeria, 2018-2021.",10.1371/journal.pone.0279467,Plos One,2022,17,12,NA,NA,FALSE,NA,Yes,No,NA,NA,Yes,Yes,No
+8321fdc6e9cc33f09d4f4c0e58c71c08,2589,Lassa mammarenavirus,Ilori,Elsie,"Epidemiologic And Clinical Features Of Lassa Fever Outbreak In Nigeria, January 1-May 6, 2018.",10.3201/eid2506.181035,Emerging Infectious Diseases,2019,25,6,1066,1074,FALSE,"Covers some of the same data / time periods as #1183.
+On May 10; 2018 NCDC declared end of Lassa fever outbreak (as cases declined below level of normally expected cases).
+Ribavirin effective treatment.",Yes,Yes,NA,NA,Yes,Yes,Yes
+cca326850cece52b6cb448ff5e6d2df2,2590,Lassa mammarenavirus,Ehichioya,Deborah U.,Phylogeography Of Lassa Virus In Nigeria.,10.1128/JVI.00929-19,Journal Of Virology,2019,93,21,NA,NA,FALSE,"Substitution rates for both S and L segment of Nigerian lineages II and III.
+Also reports mean branch dispersal velocity and Mean diffusion coefficient (Table 1)",Yes,Yes,Yes,Yes,Yes,Yes,No
+43894c4c1afe197d6fdb6b9a031ea65d,2610,Lassa mammarenavirus,Ugwu,Chinedu,Humoral And Cellular Immune Responses To Lassa Fever Virus In Lassa Fever Survivors And Their Exposed Contacts In Southern Nigeria.,10.1038/s41598-022-26045-w,Scientific Reports,2022,12,1,NA,NA,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+8dcd9631796bbe52a7ae56ac6da2807a,2611,Lassa mammarenavirus,Njuguna,Charles,A Challenging Response To A Lassa Fever Outbreak In A Non Endemic Area Of Sierra Leone In 2019 With Export Of Cases To The Netherlands,10.1016/j.ijid.2022.02.020,International Journal Of Infectious Diseases,2022,117,NA,295,301,FALSE,NA,Yes,Yes,NA,NA,Yes,No,No
+c6cead4f4e9802343ccbb00449f22471,2617,Lassa mammarenavirus,Akhmetzhanov,Andrei R.,Quantifying The Seasonal Drivers Of Transmission For Lassa Fever In Nigeria,10.1098/rstb.2018.0268,Philosophical Transactions B,2019,374,NA,NA,NA,FALSE,A model of infection dynamics in the rodent population was described and combined with the branching process model for human infections,Yes,Yes,Yes,Yes,Yes,No,No
+44abdb242ac5d81f1f402e4b6be2fc31,2620,Lassa mammarenavirus,Basinski,Andrew J.,Bridging The Gap: Using Reservoir Ecology And Human Serosurveys To Estimate Lassa Virus Spillover In West Africa,10.1371/journal.pcbi.1008811,Plos Computational Biology,2021,17,3,NA,NA,FALSE,Epidemiological model is informed by boosted tree model predictions of Lassa virus and M. natalensis distribution from environmental data. Model was used to estimate spillover rates,Yes,Yes,Yes,Yes,Yes,Yes,Yes
+81e0d91fa1fda5d6b4fc8478d686227b,2627,Lassa mammarenavirus,Zhao,Shi,Large-Scale Lassa Fever Outbreaks In Nigeria: Quantifying The Association Between Disease Reproduction Number And Local Rainfall,10.1017/S0950268819002267,Epidemiology And Infection,2020,148,NA,1,12,FALSE,"4 types of growth rate models were used. Estimates of R are also disaggregated by growth rate model used. Risk factor for R is rainfall. Transmission for R estimation is ""human to rodent to human"".",No,No,No,No,Yes,Yes,No
+532468d64e49c8b696cc09f1530f068e,2636,Lassa mammarenavirus,Shaffer,Jeffrey G.,"A Medical Records And Data Capture And Management System For Lassa Fever In Sierra Leone: Approach, Implementation, And Challenges",10.1371/journal.pone.0214284,Plos One,2019,14,3,NA,NA,FALSE,CFR estimate was restricted to those with a final outcome. They also report a CFR assuming those with an unknown outcome died. Disagg by before/after 2014 Ebola outbreak,Yes,Yes,Yes,No,Yes,Yes,No
+fe31c2bab7161c6baa662418319ead9d,2648,Lassa mammarenavirus,Nimo-Paintsil,Shirley C.,Rodent-Borne Infections In Rural Ghanaian Farming Communities,10.1371/journal.pone.0215224,Plos One,2019,14,4,NA,NA,FALSE,Seropositivity disaggregated by age; sex; village; type of ecological zone; rodent observation; and a variety of housing variables.,Yes,Yes,NA,NA,Yes,No,No
+e2d105ecdca74084b6c652802b2c4516,2651,Lassa mammarenavirus,Yadouleton,Anges,Lassa Fever In Benin: Description Of The 2014 And 2016 Epidemics And Genetic Characterization Of A New Lassa Virus,10.1080/22221751.2020.1796528,Emerging Microbes And Infections,2020,9,1,1761,1770,FALSE,In outbreak form; reporting numbers found in this investigation (not what is listed in introduction) and I put suspected cases as equal to probable+suspected cases,Yes,Yes,Yes,No,No,No,No
+cd9b32efb7bbbda5e5eab1ef5633d65e,2655,Lassa mammarenavirus,Wiley,MR,Lassa Virus Circulating In Liberia: A Retrospective Genomic Characterisation,10.1016/S1473-3099(19)30486-4,Lancet Infectious Diseases,2019,19,12,1371,1378,FALSE,No context of the dataset used to calculate substitution rates; only information is about what they themselves sequenced.,No,No,Yes,Yes,No,No,No
+75db31dff518f73287bdd16002c2b20a,2656,Lassa mammarenavirus,Dan-Nwafor,CC,A Cluster Of Nosocomial Lassa Fever Cases In A Tertiary Health Facility In Nigeria: Description And Lessons Learned 2018,10.1016/j.ijid.2019.03.030,International Journal Of Infectious Diseases,2019,83,NA,88,94,FALSE,Describes the initial cluster of cases that led to the 2017/2018 Lassa outbreak. Because this is just a cluster within a larger outbreak; I have not completed an outbreak form.,Yes,Yes,NA,NA,Yes,Yes,Yes
+fea58fe658cf60d81e608b049bed7189,2661,Lassa mammarenavirus,Redding,DW,Geographical Drivers And Climate-Linked Dynamics Of Lassa Fever In Nigeria,10.1038/s41467-021-25910-y,Nature Communications,2021,12,1,NA,NA,FALSE,Assessed risk factors of occurance and incidence of Lassa fever (that's why there are two 'other' risk factor parameter entries: one for occurance; one for incidence).,Yes,Yes,Yes,Yes,Yes,Yes,Yes
+7bdcd06d2e491ddfda97a3c826c2e554,2662,Lassa mammarenavirus,Duvignaud,A,Lassa Fever Outcomes And Prognostic Factors In Nigeria (Lascope): A Prospective Cohort Study,10.1016/S2214-109X(20)30518-0,Lancet Global Health,2021,9,4,NA,NA,FALSE,NA,Yes,Yes,Yes,Yes,Yes,Yes,Yes
+21548ccbe5faf964d154435aaf356f1a,2676,Lassa mammarenavirus,Shaibu,Joseph Ojonugwa,Immunological Screening Of Lassa Virus Among Health Workers And Contacts Of Patients Of Lassa Fever In Ondo State,10.1016/j.imbio.2021.152076,Immunobiology,2021,226,3,NA,NA,FALSE,NOTE!!: They present serology in categories of positive for IgG only and positive for both IgG and IgM. So IgG seropositivity should really be the sum of both of those categories and IgM seropositivity is just the latter category.,Yes,Yes,NA,NA,No,No,No
+e28ce3a50b0b0cf4cf89ddb9ade0dbb3,2679,Lassa mammarenavirus,Akpogheneta,Onome,Boosting Understanding Of Lassa Fever Virus Epidemiology: Field Testing A Novel Assay To Identify Past Lassa Fever Virus Infection In Blood And Oral Fluids Of Survivors And Unexposed Controls In Sierra Leone.,10.1371/journal.pntd.0009255,Plos Neglected Tropical Diseases,2021,15,3,NA,NA,FALSE,Assay for novel serology platform. Most data is from survived cases. Seropostivity for controls (recruited in non-endemic Freetown) was only available in Figure 2.,No,No,NA,NA,Yes,No,No
+07694750cc400f44b0436ff8e375038a,2684,Lassa mammarenavirus,Jetoh,Ralph W.,"Epidemiological Characteristics Of Lassa Fever Cases In Liberia: A Retrospective Analysis Of Surveillance Data, 2019-2020.",10.1016/j.ijid.2022.07.006,International Journal Of Infectious Diseases,2022,122,NA,767,774,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+fa80c03c7655ca696b13c7da0205ddc1,2707,Lassa mammarenavirus,Musa,Salihu S.,Mechanistic Modelling Of The Large-Scale Lassa Fever Epidemics In Nigeria From 2016 To 2019.,10.1016/j.jtbi.2020.110209,Journal Of Theoretical Biology,2020,493,NA,NA,NA,FALSE,"Growth rate estimates also include a deceleration of growth rate parameter p which we do not capture
+[2016/17 p=0.74 (0.54;1); 2017/18 p=0.9 (0.77;1); 2018/19 p=1 (0.85;1)]",No,No,Yes,Yes,Yes,No,No
+35894e78644b1162bc677f5b19a9c2a3,2714,Lassa mammarenavirus,Okogbenin,Sylvanus,"Retrospective Cohort Study Of Lassa Fever In Pregnancy, Southern Nigeria",10.3201/eid2508.181299,Emerging Infectious Diseases,2019,25,8,1494,1500,FALSE,Symptoms to admission disaggregated by survival outcome,Yes,No,NA,NA,Yes,Yes,No
+a1343eeb54acbd2cbcdc42a4b1415df2,2739,Lassa mammarenavirus,Kayem,Nzelle D.,Seroepidemiology Of Lassa Virus In Pregnant Women In Southern Nigeria: A Prospective Hospital-Based Cohort Study,10.1371/journal.pntd.0011354,Plos Neglected Tropical Diseases,2023,17,5,NA,NA,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+3bae49c8b337eb4110a380e79470c484,2759,Lassa mammarenavirus,Longet,Stephanie,"Influence Of Landscape Patterns On Exposure To Lassa Fever Virus, Guinea.",10.3201/eid2902.212525,Emerging Infectious Diseases,2023,29,2,304,313,FALSE,Environmental factors and impact of landscape.,Yes,Yes,Yes,Yes,Yes,Yes,Yes
+664625d3b41c6769054152af5f535eac,2760,Lassa mammarenavirus,Chika-Igwenyi,Nneka M.,"Early Onset Of Neurological Features Differentiates Two Outbreaks Of Lassa Fever In Ebonyi State, Nigeria During 2017-2018.",10.1371/journal.pntd.0009169,Plos Neglected Tropical Diseases,2021,15,3,NA,NA,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+d18376f8fbdaee1397fe7ced51d31ea1,2772,Lassa mammarenavirus,Grant,Donald S.,"Seroprevalence Of Anti-Lassa Virus Igg Antibodies In Three Districts Of Sierra Leone: A Cross-Sectional, Population-Based Study.",10.1371/journal.pntd.0010938,Plos Neglected Tropical Diseases,2023,17,2,NA,NA,FALSE,Large scale seroprevalence study with n=10;642,Yes,Yes,NA,NA,Yes,Yes,Yes
+85a9dc7b79af06a6c74ef928714c8e3b,2801,Lassa mammarenavirus,Davies,Josephine,Routine And Pulse Vaccination For Lassa Virus Could Reduce High Levels Of Endemic Disease: A Mathematical Modelling Study,10.1016/j.vaccine.2019.05.010,Vaccine,2019,37,26,3451,3456,FALSE,Model also included human-to-rodent transmission and had SEI compartments for rodents.,Yes,Yes,Yes,Yes,NA,NA,NA
+1eceb275acb47156e71a4a3756170a85,2818,Lassa mammarenavirus,Strampe,Jamie,Factors Associated With Progression To Death In Patients With Lassa Fever In Nigeria: An Observational Study,10.1016/S1473-3099(20)30737-4,Lancet Infectious Diseases,2021,21,6,876,886,FALSE,Risk factors for death were levels of 18 host proteins (best predictors were plasminogen activator-inhibitor (PAI-1) and soluble thrombomodulin (sTM)) and admission Ct values. CFRs disaggregated by study group,Yes,Yes,NA,NA,Yes,Yes,Yes
+ccda4092e544004da9459be04bf86efd,2826,Lassa mammarenavirus,Kayem,Nzelle Delphine,Transplacental Transfer Of Lassa Igg Antibodies In Pregnant Women In Southern Nigeria: A Prospective Hospital-Based Cohort Study,10.1371/journal.pntd.0011209,Plos Neglected Tropical Diseases,2023,17,4,NA,NA,FALSE,Main aim of study was to assess the efficiency of transfer of IgG antibodies from pregnant mother to child.,Yes,Yes,NA,NA,Yes,Yes,No
+61b4127c65419fb48e0e81c450164f2b,3147,Lassa mammarenavirus,Adetunji,Adewale E,Acute Kidney Injury And Mortality In Pediatric Lassa Fever Versus Question Of Access To Dialysis,10.1016/j.ijid.2020.11.006,International Journal Of Infectious Diseases,2021,103,NA,124,131,FALSE,Risk factor for death (CFR) is acute kidney injury and other clinical indices of illness severity.,Yes,Yes,NA,NA,Yes,Yes,No
+bc6c495396faeb6c5a51918f9c5c3611,3153,Lassa mammarenavirus,Chandra,Nastassya L.,"Factors Associated With Delayed Presentation To Healthcare Facilities For Lassa Fever Cases, Nigeria 2019: A Retrospective Cohort Study",10.1186/s12879-021-05822-4,Bmc Infectious Diseases,2021,21,NA,NA,NA,FALSE,"""Other"" disaggregation is by malaria prevalence and education status. Risk factor is for length of presentation time (time from symptoms to admission)",Yes,Yes,Yes,Yes,Yes,Yes,Yes
+a554804f0a1473afc8a019fb476a8cc7,3215,Lassa mammarenavirus,Nwafor,Ifeanyi E,"Prevalence And Outcome Of Lassa Fever Among Hospitalized Patients In Ebonyi State, Nigeria, 2018-2019",10.1016/j.virusres.2020.198000,Virus Research,2020,285,NA,NA,NA,FALSE,Group is suspected LF patients in Ebonyi who came to access healthcare.,No,No,NA,NA,Yes,No,No
+ad8ffa9639307cf82fb48df77b54cbd6,3258,Lassa mammarenavirus,Ochu,Chinwe Lucia,Predictors Of Lassa Fever Diagnosis In Suspected Cases Reporting To Health Facilities In Nigeria.,10.1038/s41598-023-33187-y,Scientific Reports,2023,13,1,NA,NA,FALSE,"Not adjusted disagg: Chi-square and simple LR
+Adjusted LR also disaggregated by gender but only extracted the overall model.
+Details of other RF and other occupation don't fit in noted box and stored separately (Sorry!).
+Q3;4 not relevant?",Yes,Yes,NA,NA,Yes,Yes,No
+0ca3ba0c5d6b0e45f977bc47656c73f3,3395,Lassa mammarenavirus,Blackburn,N K,Viral Haemorrhagic Fever Antibodies In Zimbabwe Schoolchildren.,10.1016/0035-9203(82)90113-4,Transactions Of The Royal Society Of Tropical Medicine And Hygiene,1982,76,6,803,805,FALSE,"IFA for 5 diseases; one of which is Lassa. No Lassa cases were found - only 1 suspicious case which I've exlcuded. Authors acknowldege ""It would probably have been more relevant to have used the Lassa related arenavirus isolated in Zimbabwe"".",Yes,No,NA,NA,Yes,Yes,No
+701e666ecf9e42a9d9e8d84ca4043528,3530,Lassa mammarenavirus,Shaffer,Jeffrey G,"Space-Time Trends In Lassa Fever In Sierra Leone By Elisa Serostatus, 2012-2019.",10.3390/microorganisms9030586,Microorganisms,2021,9,3,NA,NA,FALSE,"Note: Weird disaggregations.
+IgG & IgM Other: pre; during; and post 2014-2016 Ebola epidemic.
+IgG Other:  combination of AG and IgM serostatus
+CFR Other: Acute or not-acute infection
+RF: Infection based on Ag & IgM; Serology based onIgG",Yes,Yes,Yes,Yes,Yes,Yes,No
+d6d260dcde2869a0d450d05c1ab5fc04,3634,Lassa mammarenavirus,Grace,John-Ugwuanya A,Epidemiological Trends Of Lassa Fever In Nigeria From 2015-2021: A Review.,10.1177/20499361211058252,Therapeutic Advances In Infectious Disease,2021,8,NA,NA,NA,FALSE,NA,Yes,Yes,No,No,No,No,No
+0917806f0819d3a2318412fdbbe70d4a,3635,Lassa mammarenavirus,Nwafor,Chioma Dan,The One Health Approach To Incident Management Of The 2019 Lassa Fever Outbreak Response In Nigeria.,10.1016/j.onehlt.2021.100346,One Health,2021,13,NA,NA,NA,FALSE,"Outbreak locations are reported as ""hotspots"" - outbreak is not limited to these areas",Yes,Yes,No,No,Yes,No,No
+0ae1fd290efce5a2f21b2f9a11190efb,3659,Lassa mammarenavirus,Madueme,Praise-God Uchechukwu,Understanding The Transmission Pathways Of Lassa Fever: A Mathematical Modeling Approach.,10.1016/j.idm.2022.11.010,Infectious Disease Modelling,2023,8,1,27,57,FALSE,Theoretical model - no intervention; but many transmission paths: (i) human to human; (ii) rodent to human; (iii) rodent to rodent; (iv) environment to human transmission (v) aerosol to human; (vi) environment to rodent.,Yes,Yes,No,No,NA,NA,NA
+2213cf7eb17eb3b170415ad482f2abce,3670,Lassa mammarenavirus,Clements,Tamara L,Chikungunya And O'nyong-Nyong Viruses In Uganda: Implications For Diagnostics.,10.1093/ofid/ofz001,Open Forum Infectious Diseases,2019,6,3,NA,NA,FALSE,"Group: Healthy blood donors.
+Note: Paper tested for many diseases. The paper established the distribution of undetected diseases in a healthy Ugandan population. The main focus was on chikungunya virus and alphavirus o’nyong-nyong virus.",Yes,No,NA,NA,Yes,No,No
+ea7661b735feda578c88f4a4f1113917,3716,Lassa mammarenavirus,Akpede,George,"Caseload And Case Fatality Of Lassa Fever In Nigeria, 2001-2018: A Specialist Center's Experience And Its Implications.",10.3389/fpubh.2019.00170,Frontiers In Public Health,2019,7,NA,NA,NA,FALSE,LHF cases;admissions;deaths by year available for the Nigerian ILFRC hospital. Reference made to outbreaks in 05-07;12-14;16-18 but not extracted due to no maths rule. Seasonality also examined; but forcing not calculated. RF studies referenced.,Yes,No,NA,NA,Yes,Yes,No
+2e034a4278b07050063a07ac2a9ded1e,3735,Lassa mammarenavirus,Barua,Saumen,A Seasonal Model To Assess Intervention Strategies For Preventing Periodic Recurrence Of Lassa Fever.,10.1016/j.heliyon.2021.e07760,Heliyon,2021,7,8,NA,NA,FALSE,The 19-20 outbreak is mentioned (and fitted to) but no case data is provided. Fitted seasonal parameters are provided; but the seasonal function is strange …,Yes,No,Yes,No,NA,NA,NA
+b513bd37635ebb4c9b17e394ac1fab82,3841,Lassa mammarenavirus,Gomerep,Simji,"Epidemiological Review Of Confirmed Lassa Fever Cases During 2016-2018, In Plateau State, North Central Nigeria.",10.1371/journal.pgph.0000290,Plos Global Public Health,2022,2,6,NA,NA,FALSE,NA,Yes,No,NA,NA,Yes,No,No
+a07d714192f45231e3edbb2921a3143c,3991,Lassa mammarenavirus,Olayinka,Adebola,Analysis Of Sociodemographic And Clinical Factors Associated With Lassa Fever Disease And Mortality In Nigeria.,10.1371/journal.pgph.0000191,Plos Global Public Health,2022,2,8,NA,NA,FALSE,NA,Yes,Yes,NA,NA,Yes,Yes,No
+6528f81cb57c30a77a5cb6ff2bc43bf6,4113,Lassa mammarenavirus,Abdulhamid,Abdurrahman,Mathematical Analysis Of Lassa Fever Epidemic With Effects Of Environmental Transmission,10.1016/j.rinp.2022.105335,Results In Physics,2022,35,NA,NA,NA,FALSE,NA,No,No,No,No,NA,NA,NA
+a08d8153893a560ceb1ce01247c99753,4118,Lassa mammarenavirus,Ibrahim,Mahmoud,A Mathematical Model For Lassa Fever Transmission Dynamics In A Seasonal Environment With A View To The 2017-20 Epidemic In Nigeria,10.1016/j.nonrwa.2021.103310,Nonlinear Analysis: Realworld Applications,2021,60,NA,NA,NA,FALSE,A number of parameters are fitted in this modelling study; but it is difficult to relate most of these to the list of parameters we want to extract; e.g. death rate vs. CFR.,Yes,No,No,No,NA,NA,NA
+02be8911c66d714267ee65f7b290757c,4120,Lassa mammarenavirus,Abidemi,Afeez,Modelling The Transmission Dynamics Of Lassa Fever With Nonlinear Incidence Rate And Vertical Transmission,10.1016/j.physa.2022.127259,Physica A,2022,597,NA,NA,NA,FALSE,NA,Yes,No,No,No,NA,NA,NA
+dae6adfd3c4fe5b5d451950351f9f371,4131,Lassa mammarenavirus,Onifade,Akindele A.,Bifurcation Of Subharmonic In Lassa Fever Epidemic Model,NA,Italian Journal Of Pure And Applied Mathematics,2021,45,NA,130,144,FALSE,NA,No,No,No,No,NA,NA,NA
+d02942d326298254e61d7bc078f80030,4133,Lassa mammarenavirus,Faniran,T.S.,Investigating Essential Factors In The Spread Of Lassa Fever Dynamics Through Sensitivity Analysis,10.22075/ijnaa.2021.22707.2405,International Journal Of Nonlinear Analysis And Applications,2022,13,1,485,497,FALSE,considers two classes of rats: house rat and bush rat,No,No,No,No,NA,NA,NA
+18872fcaf0d8e9f99ad45036e2978b4d,4136,Lassa mammarenavirus,Ogunmiloro,Oluwatayo M.,Modeling The Dynamics Of The Consequences Of Demographic Disparities In The Transmission Of Lassa Fever Disease In Nigeria,10.1007/s40808-022-01522-3,Modeling Earth Systems And Environment,2023,9,1,865,880,FALSE,Paper notes a R0 of 140.009 which looks like an incidence rate given description. As such we only capture as a note rather than parameter.,No,No,No,No,No,No,No
+c3f09a0b8b9fa5fbc00d96da71cf00ed,4144,Lassa mammarenavirus,Collins,Obiora C.,Using Data Of A Lassa Fever Epidemic In Nigeria: A Mathematical Model Is Shown To Capture The Dynamics And Point To Possible Control Methods,10.3390/math11051181,Mathematics,2023,11,5,NA,NA,FALSE,NA,Yes,Yes,Yes,Yes,Yes,No,No
+41d50d4cb8f2cc0c1121893d2df761ac,4162,Lassa mammarenavirus,Bakare,E. A.,Mathematical Modelling And Analysis Of Transmission Dynamics Of Lassa Fever,10.1155/2020/6131708,Journal Of Applied Mathematics,2020,2020,NA,NA,NA,FALSE,NA,No,No,No,Yes,NA,NA,NA
+37b2d23dec0bb5b019039aa5e72f0136,4193,Lassa mammarenavirus,Alsallami,Shami A. M.,Computational Approximations For Real-World Application Of Epidemic Model,10.32604/iasc.2022.024993,Intelligent Automation & Soft Computing,2022,33,3,1923,1939,FALSE,NA,No,No,No,No,NA,NA,NA
+021d6376065da237ad5bf0f0aaf3bdfa,4207,Lassa mammarenavirus,Ndenda,J.P.,"Influence Of Environmental Viral Load, Interpersonal Contact And Infected Rodents On Lassa Fever Transmission Dynamics: Perspectives From Fractional-Order Dynamic Modelling",10.3934/math.2022500,Aims Mathematics,2022,7,5,8975,9002,FALSE,NA,No,No,No,No,Yes,No,No
+5148def0826b3b4b9fed04c32c29cbb3,4213,Lassa mammarenavirus,Hamam,H,Stochastic Modelling Of Lassa Fever Epidemic Disease,10.3390/math10162919,Mathematics,2022,10,16,NA,NA,FALSE,"Creates stochastic transitions for an existing deterministic model 
+
+Two behaviour changes: 
+- Awareness
+- Rate of treatment-taking compliance",Yes,No,No,No,NA,NA,NA
+61487d0bcc3ba65bf452b48c0bf53a2a,4237,Lassa mammarenavirus,Abdullahi,A,Modelling Of Transmission And Control Of Lassa Fever Via Caputo Fractional-Order Derivative,10.1016/j.chaos.2021.111271,Chaos Solitons & Fractals,2021,151,NA,NA,NA,FALSE,SIR (Human);  J(Juvenile)SI (Rodents),No,Yes,No,No,NA,NA,NA
+1a6464fca0c64fc78c51af8b0315aa8a,4243,Lassa mammarenavirus,Shoaib,M,A Design Of Predictive Computational Network For Transmission Model Of Lassa Fever In Nigeria,10.1016/j.rinp.2022.105713,Results In Physics,2022,39,NA,NA,NA,FALSE,"Existing model; but new optimisation strategy. 
+SIR (Human); SI(Rodent)",Yes,No,No,No,NA,NA,NA
+51c565ac6dd97623d08c6fa4c71171d2,4251,Lassa mammarenavirus,Onah,I S,Dynamical System Analysis Of A Lassa Fever Model With Varying Socioeconomic Classes,10.1155/2020/2601706,Journal Of Applied Mathematics,2020,2020,NA,NA,NA,FALSE,"SIR (Human); SI (Rodents)
+Multipatch model; where each patch represents a different socioeconomic class. Both a 2-class (patch) and general n-class (patch) are given. I've captured this in the assumptions rather than as an intervention.",Yes,No,Yes,No,NA,NA,NA
+c772c487685dfd7937fbdd62ceb345e2,4314,Lassa mammarenavirus,Joseph,A,"Clinical Profile Of Lassa Fever Patients In Abakaliki, South-Eastern Nigeria, January - March 2018",NA,Annals Of Medical And Health Sciences Research,2019,9,3,598,602,FALSE,"CFR Disagg:
+Ocuptation: Healthcare workers
+Other: Patients on Rivaberin.
+Abtract doesn't match up well with the paper ito of analysis - or it's worded badly at the very least.",No,No,No,No,Yes,No,No
+bd7b34286855ff335accb6bdbd83f694,4316,Lassa mammarenavirus,Loyinmi,AC,Qualitative Analysis And Dynamical Behavior Of A Lassa Haemorrhagic Fever Model With Exposed Rodents And Saturated Incidence Rate,10.1016/j.sciaf.2021.e01028,Scientific African,2021,14,NA,NA,NA,FALSE,"Model has two types of rodent vectors (Mastomys Natalensis primary vector and rattus-rattus  (domestic rodent) secondary vector.
+SEIR (Humans); SEI (Rodents)",Yes,No,No,No,NA,NA,NA
+4fdb76d057b0c7104ec8a508ec895fdb,4340,Lassa mammarenavirus,Chu,YM,New Numerical Simulation For The Fractal-Fractional Model Of Deathly Lassa Hemorrhagic Fever Disease In Pregnant Women With Optimal Analysis,10.1142/S0218348X23400546,Fractals-Complex Geometry Patterns And Scaling In Nature And Society,2023,31,4,NA,NA,FALSE,Focussed on pregnant women.,No,No,No,No,NA,NA,NA
+8f5f179c9f034db2a52a515ce1ab8f8d,4343,Lassa mammarenavirus,Onah,I.S.,Dynamical System Analysis And Optimal Control Measures Of Lassa Fever Disease Model,10.1155/2020/7923125,International Journal Of Mathematics And Mathematical Sciences,2020,2020,NA,NA,NA,FALSE,NA,Yes,Yes,No,No,NA,NA,NA
+7070ae5de467980fbf1bd71bfeb605d5,4371,Lassa mammarenavirus,Abidemi,Afeez,Assessing The Dynamics Of Lassa Fever With Impact Of Environmental Sanitation: Optimal Control And Cost-Effectiveness Analysis,10.1007/s40808-022-01624-y,Modeling Earth Systems And Environment,2023,9,2,2259,2284,FALSE,Cost effectiveness analysis (poor quality),No,No,No,No,NA,NA,NA
+79287e0634e04e9028c285b824f8c66e,4487,Lassa mammarenavirus,Alkahtani,Badr Saad T.,Mathematical Model Of Lassa Fever Spread: Model With New Trends Of Differential Operators,10.1016/j.rinp.2020.103523,Results In Physics,2020,19,NA,NA,NA,FALSE,NA,No,No,No,No,NA,NA,NA
+645ec0ddecf28b869669b3c10c04aec2,4517,Lassa mammarenavirus,Goyal,Manish,An Efficient Technique For A Time Fractional Model Of Lassa Hemorrhagic Fever Spreading In Pregnant Women,10.1140/epjp/i2019-12854-0,European Physical Journal Plus,2019,134,10,NA,NA,FALSE,NA,No,No,No,No,NA,NA,NA
+752ac23027767c5ec29cb0fef9e384cc,4595,Lassa mammarenavirus,Smith,E A,Epidemiological Aspect Of The 1976 Pankshin Lassa Fever Outbreak,NA,Nigerian Medical Journal,1979,9,1,20,22,FALSE,"Trade/Business: Wimpey Construction Company camp
+Serotest: CF Test
+Disagg: Has only numerator and denominator; so no range for param.",Yes,Yes,NA,NA,Yes,No,No
+91256ccb48fcfa2d6094397cdb668ca2,4597,Lassa mammarenavirus,Higazy,M.,"Numerical, Approximate Solutions, And Optimal Control On The Deathly Lassa Hemorrhagic Fever Disease In Pregnant Women",10.1155/2021/2444920,Journal Of Function Spaces,2021,2021,NA,NA,NA,FALSE,NA,No,No,No,No,NA,NA,NA
+42ccf54e7cd02f19636ec52c7d13b4f5,4684,Lassa mammarenavirus,McCormick,Joseph B,A Prospective Study Of The Epidemiology And Ecology Of Lassa Fever,10.1093/infdis/155.3.437,Journal Of Infectious Diseases,1987,155,3,437,444,FALSE,Also contains serocoversation rates and results from a rodent-trapping study. There is also a very loosely suggested IFR which I didn't extract. One sentence with no numerator and denominator and also no methodology.,Yes,Yes,NA,NA,No,Yes,Yes
+cd4e9908d4a31a198a5ddce7ed91d01d,4727,Lassa mammarenavirus,Samuels,Robert J,"Lassa Fever Among Children In Eastern Province, Sierra Leone: A 7-Year Retrospective Analysis (2012-2018)",10.4269/ajtmh.20-0773,American Journal Of Tropical Medicine And Hygiene,2021,104,2,585,592,FALSE,"""Other"" risk factors are symptoms and a variety of laboratory results (some were sig and some non-sig). Receipt of ribavirin was also ""other"" and non-sig.",Yes,No,Yes,Yes,Yes,Yes,No
+b895ff1b44ba2b783c78ba3185fb2c28,4745,Lassa mammarenavirus,Mertens,P. E.,"Clinical Presentation Of Lassa Fever Cases During Hospital Epidemic At Zorzor, Liberia, March-April 1972",10.4269/ajtmh.1973.22.780,American Journal Of Tropical Medicine And Hygiene,1973,22,6,780,784,FALSE,confirmation via Lassa CF antibodies,Yes,No,NA,NA,Yes,Yes,No
+b58357c15f21cf90f7766b06bf737afc,4827,Lassa mammarenavirus,Gao,Wei,New Approach For The Model Describing The Deathly Disease In Pregnant Women Using Mittag-Leffler Function,10.1016/j.chaos.2020.109696,Chaos Solitons & Fractals,2020,134,NA,NA,NA,FALSE,NA,No,No,No,No,NA,NA,NA
diff --git a/inst/extdata/lassa_models.csv b/inst/extdata/lassa_models.csv
new file mode 100644
index 0000000..f68d8ce
--- /dev/null
+++ b/inst/extdata/lassa_models.csv
@@ -0,0 +1,34 @@
+id,model_data_id,covidence_id,pathogen,model_type,compartmental_type,stoch_deter,theoretical_model,interventions_type,code_available,transmission_route,assumptions
+ecf59a0248a980aa1a268346c172a28d,34e6c4d56a03b83dcb1d43d4730aaf2d,285,Lassa mammarenavirus,Other,Not compartmental,Stochastic,FALSE,Unspecified,TRUE,Vector/Animal to human,Heterogenity in transmission rates - between groups
+a7ab005860fa1caba3ba17bae7c7ebb6,9d491ae79153d270696c5b825d35812b,558,Lassa mammarenavirus,Branching process,Not compartmental,Stochastic,FALSE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - over time
+dc58ccb401238d09a9ba6452086ea3ac,25427351eb44ed1a28d0b00ecaa34f18,560,Lassa mammarenavirus,Branching process,Not compartmental,Stochastic,FALSE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+08f1d841f35f85fe53aeef50919e9974,934daf6d79a34b5daf8703d83b2eb624,1410,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Treatment,FALSE,Human to human (direct contact),Homogeneous mixing
+045d93c8a76e88ee9edaccc10845db4f,18855910af5f5c3e2eb120d2e2180d30,2578,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Behaviour changes;Treatment,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+c6cead4f4e9802343ccbb00449f22471,a762f6f76b7f803d4cd8fb11b8dffca9,2617,Lassa mammarenavirus,Branching process,Not compartmental,Stochastic,FALSE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - between groups;Heterogenity in transmission rates - over time
+44abdb242ac5d81f1f402e4b6be2fc31,93da783c1ba662449efffc653659ada7,2620,Lassa mammarenavirus,Other,Not compartmental,Deterministic,FALSE,Unspecified,TRUE,Vector/Animal to human,Heterogenity in transmission rates - between groups
+fa80c03c7655ca696b13c7da0205ddc1,35bb33a3bf6dd9f78fcf7d03388627ac,2707,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Hospitals;Quarantine,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+85a9dc7b79af06a6c74ef928714c8e3b,92d6ae9404719ce4082509d09140e389,2801,Lassa mammarenavirus,Compartmental,SEIR,Deterministic,TRUE,Vaccination,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+0ae1fd290efce5a2f21b2f9a11190efb,775503e015f729052b3755f6fec372c8,3659,Lassa mammarenavirus,Compartmental,SEIR,Deterministic,TRUE,Unspecified,FALSE,Airborne or close contact;Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+2e034a4278b07050063a07ac2a9ded1e,43de63c975d599370442fa386f0cc6b5,3735,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Behaviour changes;Quarantine;Treatment;Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - between groups;Heterogenity in transmission rates - over time;Latent period is same as incubation period
+6528f81cb57c30a77a5cb6ff2bc43bf6,a18713efa3b82d6d22cd81850a7b36a1,4113,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Quarantine,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+a08d8153893a560ceb1ce01247c99753,f5f46a26318be4566542ce6cc2362596,4118,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Treatment,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - over time;Latent period is same as incubation period
+02be8911c66d714267ee65f7b290757c,539467c9e7ce7e39d362c87c14180074,4120,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Behaviour changes;Treatment;Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - between groups
+dae6adfd3c4fe5b5d451950351f9f371,59c9273979fbde59e4ec56d5810210d8,4131,Lassa mammarenavirus,Compartmental,SEIR,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Age dependent susceptibility
+d02942d326298254e61d7bc078f80030,48193a75c949168af5f59e5ec8809e7d,4133,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Treatment;Vector/Animal control,FALSE,Vector/Animal to human,Homogeneous mixing
+18872fcaf0d8e9f99ad45036e2978b4d,3001b808b9aa25f4f3090c0bef50562a,4136,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Contact tracing;Hospitals;Quarantine,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - between groups
+c3f09a0b8b9fa5fbc00d96da71cf00ed,bb22b92b1e0854a8f3a64f5db0affebd,4144,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Quarantine;Treatment;Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+41d50d4cb8f2cc0c1121893d2df761ac,fe8a0eb280cf30011194b9582470e550,4162,Lassa mammarenavirus,Compartmental,SEIR,Deterministic,TRUE,Behaviour changes;Other;Quarantine;Treatment;Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+37b2d23dec0bb5b019039aa5e72f0136,56a2d350554e8f429472129ec8fb89b8,4193,Lassa mammarenavirus,Compartmental,SIR,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+021d6376065da237ad5bf0f0aaf3bdfa,27cf870bdfa5f3152220fece92f68c65,4207,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,FALSE,Behaviour changes;Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+5148def0826b3b4b9fed04c32c29cbb3,92406be713272aa12a718b90e9044ac3,4213,Lassa mammarenavirus,Compartmental,SIR,Stochastic,TRUE,Behaviour changes,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+61487d0bcc3ba65bf452b48c0bf53a2a,fcd21be7ec7fa983de2b970a716fe95a,4237,Lassa mammarenavirus,Compartmental,SIR,Deterministic,TRUE,Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+1a6464fca0c64fc78c51af8b0315aa8a,8591ce1bb834e91c650f7c8958317b18,4243,Lassa mammarenavirus,Compartmental,SEIR,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+51c565ac6dd97623d08c6fa4c71171d2,c503a1e990ea3550e7aada622728f88d,4251,Lassa mammarenavirus,Compartmental,SIR,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - between groups
+bd7b34286855ff335accb6bdbd83f694,b506da87b4a288bfd59948f80bee40d6,4316,Lassa mammarenavirus,Compartmental,SEIR,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+4fdb76d057b0c7104ec8a508ec895fdb,2449562afac8436b8be941f8af52a422,4340,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact),Homogeneous mixing
+8f5f179c9f034db2a52a515ce1ab8f8d,c4639ce1afd020b9532751b028f71970,4343,Lassa mammarenavirus,Compartmental,Other compartmental;SIR,Deterministic,TRUE,Other;Quarantine;Treatment;Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - between groups
+7070ae5de467980fbf1bd71bfeb605d5,917c468d0b52f2c8b31f7df9dc825b3d,4371,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Behaviour changes;Other;Treatment;Vector/Animal control,FALSE,Human to human (direct contact);Vector/Animal to human,Heterogenity in transmission rates - between groups
+79287e0634e04e9028c285b824f8c66e,1f1cd3ac950f49599fe1c53c7c9fc88d,4487,Lassa mammarenavirus,Compartmental,SEIR,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact);Vector/Animal to human,Homogeneous mixing
+645ec0ddecf28b869669b3c10c04aec2,e2dd21363135121f2a52e742a52d9b3d,4517,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact),Homogeneous mixing
+91256ccb48fcfa2d6094397cdb668ca2,434b9afbf47cd423adc61e15739d71ee,4597,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact),Homogeneous mixing
+b58357c15f21cf90f7766b06bf737afc,c41ba506c3850f0306ec4ca22e15c5ae,4827,Lassa mammarenavirus,Compartmental,Other compartmental,Deterministic,TRUE,Unspecified,FALSE,Human to human (direct contact),Homogeneous mixing
diff --git a/inst/extdata/lassa_outbreaks.csv b/inst/extdata/lassa_outbreaks.csv
new file mode 100644
index 0000000..d830135
--- /dev/null
+++ b/inst/extdata/lassa_outbreaks.csv
@@ -0,0 +1,29 @@
+id,outbreak_data_id,covidence_id,pathogen,outbreak_start_day,outbreak_start_month,outbreak_start_year,outbreak_end_day,outbreak_end_month,outbreak_date_year,outbreak_duration_months,asymptomatic_transmission,outbreak_country,outbreak_location,cases_confirmed,cases_mode_detection,cases_suspected,cases_asymptomatic,cases_severe,deaths,pre_outbreak,ongoing
+9da04c9c3464ba932aa82d2e4a0fb5ea,00e2733a168ab3ea8f8c9fbb50e9ab1b,60,Lassa mammarenavirus,1,Jan,2018,29,Apr,2018,NA,FALSE,Nigeria,NA,420,Unspecified,NA,NA,NA,106,Endemic equilibrium,FALSE
+b1ed69167fd7c17d124b8f1bf65329e1,8ced256dd0fec2c2fa8c3f1ae5917db7,61,Lassa mammarenavirus,NA,Jan,1970,NA,NA,NA,NA,FALSE,Nigeria,Jos Plateau,13,Unspecified,26,NA,NA,10,Unspecified,TRUE
+39819a2a94765a2302e96fca8c7de0bd,6493a15fce9bb839f999a47e2bc40e48,152,Lassa mammarenavirus,NA,Dec,2017,NA,May,2018,NA,FALSE,Nigeria,NA,431,Molecular (PCR etc),NA,NA,NA,NA,Endemic equilibrium,FALSE
+a7ab005860fa1caba3ba17bae7c7ebb6,6df0780469ebe8a022cb69943ab3151e,558,Lassa mammarenavirus,27,Apr,2010,31,Jan,2012,NA,FALSE,Sierra Leone,Kenema Government Hospital,NA,Unspecified,1002,NA,NA,NA,Unspecified,FALSE
+dc58ccb401238d09a9ba6452086ea3ac,33c744165caeec50bb78b57e020f8299,560,Lassa mammarenavirus,25,Dec,1969,NA,NA,NA,2,FALSE,Nigeria,Jos,23,Unspecified,NA,NA,NA,NA,Endemic equilibrium,FALSE
+dc58ccb401238d09a9ba6452086ea3ac,28f2fb63eda710078594e1861c7af821,560,Lassa mammarenavirus,NA,Mar,1972,NA,Apr,1972,1,FALSE,Liberia,Zorzor,11,Unspecified,NA,NA,NA,NA,Endemic equilibrium,FALSE
+dc58ccb401238d09a9ba6452086ea3ac,645cb2ec17f3fc72ab87a11707da6a10,560,Lassa mammarenavirus,27,Apr,2010,31,Jan,2012,NA,FALSE,Sierra Leone,Kenema Government Hospital,295,Molecular (PCR etc),1002,NA,NA,NA,Endemic equilibrium,FALSE
+efb15bb557943d996a14bbe398aa6b8f,e106ba2475561eba61c5ed701446a239,832,Lassa mammarenavirus,23,Sep,1972,15,Oct,1972,NA,FALSE,Sierra Leone,Panguma; Tongo,12,Molecular (PCR etc),20,NA,NA,NA,Endemic equilibrium,FALSE
+5e7d20c0d0d52495025dc8a09f656096,da5b689447af705b1d6025ccb10982f9,840,Lassa mammarenavirus,NA,Jul,1980,NA,Apr,1982,NA,FALSE,Liberia,Curran Lutheran Hospital; Zorzor,14,Molecular (PCR etc),NA,NA,NA,NA,Unspecified,FALSE
+2e4ff9c8065b9faadd3a386783fc93e3,922befc25f233a98daf50c4d7583db71,842,Lassa mammarenavirus,12,Jan,1969,3,May,1969,NA,FALSE,Nigeria,Lassa; Jos,NA,Unspecified,3,NA,NA,2,Unspecified,FALSE
+8b9eae26603fabaa7c46c0d0880e7035,b1670571dd36918841cc1840fcee35fa,1161,Lassa mammarenavirus,NA,Jan,1970,NA,Feb,1970,NA,FALSE,Nigeria,Jos,15,Molecular (PCR etc),13,NA,NA,13,Unspecified,FALSE
+bd5e179ceac6d7d3a08d2686781dd8c8,de064e4b763fcd33a2bd62c34a338191,1173,Lassa mammarenavirus,1,Dec,2015,30,Apr,2016,NA,FALSE,Nigeria,Ondo State,19,Molecular (PCR etc),NA,NA,NA,12,Endemic equilibrium,FALSE
+ee9a2b7c5f5092606151f83de44d102f,fcd3ff43ea5944e68d14b44aa47f6afa,1183,Lassa mammarenavirus,1,Jan,2017,25,Mar,2017,3,FALSE,Nigeria,NA,107,Unspecified,NA,NA,NA,50,Endemic equilibrium,FALSE
+ee9a2b7c5f5092606151f83de44d102f,eef5e9507eac660e2537865a666476eb,1183,Lassa mammarenavirus,1,Jan,2018,25,Mar,2018,3,FALSE,Nigeria,NA,394,Unspecified,NA,NA,NA,104,Endemic equilibrium,FALSE
+8fdea1afb902a4cfacf42853b8e222e6,f4299d05ee4ccd66d8e7c31791a2f9ba,1254,Lassa mammarenavirus,NA,Jan,2016,NA,Jun,2016,NA,FALSE,Liberia,Bong; Nimba; Montserrado,14,Molecular (PCR etc),14,NA,NA,19,Endemic equilibrium,FALSE
+26839290fc754199f5fb8287714a2689,82e5d95e67ffbf56badee8f6848b2180,1272,Lassa mammarenavirus,NA,Oct,2015,NA,Feb,2016,NA,FALSE,Nigeria,Taraba; Edo; Lagos; Bauchi; Rivers; Gombe; Ekiti,47,Molecular (PCR etc),NA,NA,NA,28,Endemic equilibrium,FALSE
+2c298b19cc69c9ac1aeedf4b8178f350,30cb31c87495d754385310ae1d5f86bf,1310,Lassa mammarenavirus,NA,Jan,1974,NA,Feb,1974,NA,FALSE,Nigeria,Onitsha,3,Molecular (PCR etc),NA,NA,NA,1,Unspecified,FALSE
+d2ecc47171bdd43a29fed1a9e927fe9f,cb001054b9662bf7bfceaff3a036fe4b,1433,Lassa mammarenavirus,NA,Jan,1997,NA,Apr,1997,4,FALSE,Sierra Leone,Kenema ; Kailahun,NA,Molecular (PCR etc),NA,NA,352,NA,Unspecified,FALSE
+f14b287ccc8da2a837c4d9d3ae2b3394,86fefbcfa0e6715e7355fae930c8ccde,1447,Lassa mammarenavirus,1,Jan,2012,25,Mar,2012,NA,FALSE,Nigeria,Ebonyi State,10,Molecular (PCR etc),10,NA,NA,6,Endemic equilibrium,FALSE
+8321fdc6e9cc33f09d4f4c0e58c71c08,83bc94e420b12884eec0036be4caea4f,2589,Lassa mammarenavirus,1,Jan,2018,6,May,2018,4,FALSE,Nigeria,NA,423,Molecular (PCR etc),10,NA,NA,106,Endemic equilibrium,FALSE
+8dcd9631796bbe52a7ae56ac6da2807a,da822d7af7d63b40c2170c835af2988c,2611,Lassa mammarenavirus,30,Oct,2019,16,Nov,2019,1,FALSE,Sierra Leone,Tonkolili District,3,Molecular (PCR etc),2,NA,NA,3,Endemic equilibrium,FALSE
+e2d105ecdca74084b6c652802b2c4516,3d1ae4a5d64202801eb1023880cc84d1,2651,Lassa mammarenavirus,NA,Oct,2014,NA,Nov,2014,1,FALSE,Benin,Northern Benin,2,Molecular (PCR etc),11,NA,NA,11,Unspecified,FALSE
+e2d105ecdca74084b6c652802b2c4516,d38236092243b817083ec27802c43b93,2651,Lassa mammarenavirus,NA,Dec,2015,NA,Mar,2016,3,FALSE,Benin,Borgou; Donga;Collines; Alibori; Plateau; Ouémé; Atlantique; Litoral,18,Molecular (PCR etc),3,NA,NA,11,Unspecified,FALSE
+0917806f0819d3a2318412fdbbe70d4a,102ce34a6e9e768d3841366fca6c9c81,3635,Lassa mammarenavirus,1,Jan,2019,29,Dec,2019,12,FALSE,Nigeria,Edo; Ondo; Ebonyi,833,Molecular (PCR etc),5057,NA,NA,174,Unspecified,FALSE
+a07d714192f45231e3edbb2921a3143c,2dbb85545fc17678fec712387bd9f0a4,3991,Lassa mammarenavirus,NA,NA,2018,NA,NA,2019,NA,FALSE,Nigeria,NA,1463,Molecular (PCR etc),NA,NA,NA,344,Endemic equilibrium,FALSE
+c772c487685dfd7937fbdd62ceb345e2,ecdaa1da15ace6aa3b601483a15d0240,4314,Lassa mammarenavirus,NA,NA,2017,NA,NA,2017,NA,FALSE,Nigeria,NA,312,Unspecified,NA,NA,NA,78,Unspecified,FALSE
+bd7b34286855ff335accb6bdbd83f694,323e39e17fca03ed666f5c0545e987a6,4316,Lassa mammarenavirus,1,Jan,2018,18,Mar,2018,NA,FALSE,Nigeria,Anambra; Bauchi; Benue; Delta; Ebonyi; Edo; Ekiti; Fct; Abuja; Gombe; Imo; Kaduna; Kogi; Lagos; Nasarawa; Ondo; Osun; Plateau; Rivers; Taraba,376,Unspecified,1495,NA,NA,95,Unspecified,FALSE
+b895ff1b44ba2b783c78ba3185fb2c28,5b6b37f17d74f50b2d54e61edb597118,4745,Lassa mammarenavirus,NA,Mar,1972,NA,Apr,1972,NA,FALSE,Liberia,Zorzor,11,Unspecified,NA,NA,NA,4,Unspecified,FALSE
diff --git a/inst/extdata/lassa_parameters.csv b/inst/extdata/lassa_parameters.csv
new file mode 100644
index 0000000..9ff4e24
--- /dev/null
+++ b/inst/extdata/lassa_parameters.csv
@@ -0,0 +1,379 @@
+id,parameter_data_id,covidence_id,pathogen,parameter_type,parameter_value,exponent,parameter_unit,parameter_lower_bound,parameter_upper_bound,parameter_value_type,parameter_uncertainty_single_value,parameter_uncertainty_singe_type,parameter_uncertainty_lower_value,parameter_uncertainty_upper_value,parameter_uncertainty_type,cfr_ifr_numerator,cfr_ifr_denominator,distribution_type,distribution_par1_value,distribution_par1_type,distribution_par1_uncertainty,distribution_par2_value,distribution_par2_type,distribution_par2_uncertainty,method_from_supplement,method_moment_value,cfr_ifr_method,method_r,method_disaggregated_by,method_disaggregated,method_disaggregated_only,riskfactor_outcome,riskfactor_name,riskfactor_occupation,riskfactor_significant,riskfactor_adjusted,population_sex,population_sample_type,population_group,population_age_min,population_age_max,population_sample_size,population_country,population_location,population_study_start_day,population_study_start_month,population_study_start_year,population_study_end_day,population_study_end_month,population_study_end_year,genome_site,genomic_sequence_available,other_delay_start,other_delay_end,inverse_param,parameter_from_figure,r_pathway,parameter_class
+9f62e47ed45a53c1336e8e63d7d7f6cb,69df4cbc0d4c95524c8cb3e4416bc2b1,18,Lassa mammarenavirus,Seroprevalence - IFA,21,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,51,245,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Children,0,14,479,Sierra Leone,Eastern Province,NA,Aug,1977,NA,Aug,1981,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+9f62e47ed45a53c1336e8e63d7d7f6cb,0793b33417152f31bb5d091d2bb5d0b6,18,Lassa mammarenavirus,Severity - case fatality rate (CFR),NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,6,51,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Children,0,14,225,Sierra Leone,Eastern Province,NA,Aug,1977,NA,Aug,1981,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+31dd2011f51dde6a294decf0394646e4,12bd4b6cfe171d910ecdfc1781a2f80d,18,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Sex,NA,Not significant,Not adjusted,Both,Hospital based,Children,0,14,245,Sierra Leone,Eastern Province,NA,Aug,1977,NA,Aug,1981,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+31dd2011f51dde6a294decf0394646e4,2574e43bd234df94399eb6adfcf5cb5f,18,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Sex,NA,Significant,Not adjusted,Both,Hospital based,Children,0,14,245,Sierra Leone,Eastern Province,NA,Aug,1977,NA,Aug,1981,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+7f4b4528feba7ce6d3a5033854ea7a42,56a6343b241fe047828d59c77fccd3eb,49,Lassa mammarenavirus,Seroprevalence - IgG,1.3,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,3,225,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Mixed groups,NA,NA,225,Liberia,Grand Bassa County,NA,Nov,1981,NA,Jan,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+93d3ee2b0b807525133000bdfb9e41f6,66d5987987dbb6c9b2876af45f2e9197,61,Lassa mammarenavirus,Human delay - symptom onset>death,NA,0,Weeks,1,2,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,Jos Plateau,NA,Jan,1970,NA,Feb,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+93d3ee2b0b807525133000bdfb9e41f6,a1b9de956b4e773b45e56b47e4a5c299,61,Lassa mammarenavirus,Human delay - other human delay (go to section),NA,0,Weeks,1,4,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,Jos Plateau,NA,Jan,1970,NA,Feb,1970,NA,FALSE,Symptom Onset/Fever,Symptom Resolution,FALSE,FALSE,NA,Human delay
+b1ed69167fd7c17d124b8f1bf65329e1,ae1e378d07ade02081d4faa5ffa08114,61,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,22,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,22,Nigeria,Jos,NA,Jan,1970,NA,Feb,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+b1ed69167fd7c17d124b8f1bf65329e1,30508007058c4b9da1a956b9395a828e,61,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,4,53,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Contact based,Persons under investigation,NA,NA,53,Nigeria,Jos Plateau,NA,Jan,1970,NA,Feb,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0e06f783f34b11ba33b1ab6f3d7c2d43,1a304d4cd1a15bca0473d75f77647079,68,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Sex,NA,Not significant,Unspecified,Both,Population based,General population,5,70,1677,Nigeria,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+0e06f783f34b11ba33b1ab6f3d7c2d43,4e067f105337b83837cc29f08520649d,68,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age,NA,Unspecified,Unspecified,Both,Population based,General population,5,70,1677,Nigeria,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+0e06f783f34b11ba33b1ab6f3d7c2d43,4576be9bff854bf8fa2cf63363dd98a0,68,Lassa mammarenavirus,Seroprevalence - IFA,21.3,0,Percentage (%),13.4,37.5,Unspecified,NA,NA,NA,NA,NA,357,1677,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,5,70,1677,Nigeria,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+01164920772c52dcd07ce445ef103eae,2f33025f05160c315bc674cdc446f71b,74,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Other,NA,Significant,Unspecified,Both,Community based,General population,10,94,177,Nigeria,Edo State,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+01164920772c52dcd07ce445ef103eae,f4bad8c43f6d50399ae91753c82176a1,74,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Other;Sex,NA,Not significant,Unspecified,Both,Community based,General population,10,94,177,Nigeria,Edo State,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+01164920772c52dcd07ce445ef103eae,25b10643b59f922b8bdec72fc953a632,74,Lassa mammarenavirus,Seroprevalence - IgG,58.2,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,103,177,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,10,94,177,Nigeria,Edo State,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+01164920772c52dcd07ce445ef103eae,67a96c9c205c786cef2ef4a5ccba5e61,74,Lassa mammarenavirus,Seroprevalence - IgM,1.1,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,2,177,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,10,94,177,Nigeria,Edo State,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+6cc9cdeb7652ce2eeb78ae9df2a3efaa,6e84b157f93a2c0e4a53d6a76ee50509,79,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,277,Ethiopia,Assab; Awash; Blue Nile; Illubabor; Ogaden; Gambata; Kaffa; Sidamo (West); Wallega,NA,NA,1961,NA,NA,1983,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+59ed726111e716143c101513e5ee7a23,5a3f468f04b553892be2beb230275f2b,81,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Time;Other,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Community based,Mixed groups,1,80,NA,Botswana,Chobe,NA,Dec,1984,NA,Aug,1986,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+d7e338066ff4d9487c15eceec2ee70bd,11e81c77f6372785caa027621ae96624,85,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Contact with animal;Other;Sex,NA,Not significant,Adjusted,Both,Population based,General population,4,99,991,Guinea,Pita; Gueckedou,NA,Feb,1993,NA,Apr,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+930c9a9f801f9c57ea5a5d461bf09645,899bfcf65040ff48243b76bf02991791,85,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Contact with animal;Other;Sex,NA,Not significant,Not adjusted,Both,Population based,General population,4,99,991,Guinea,Pita; Gueckedou,NA,Feb,1993,NA,Apr,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+930c9a9f801f9c57ea5a5d461bf09645,24bd8bf92cecf1ea1ef515b9e8eca3cd,85,Lassa mammarenavirus,Seroprevalence - IgG,2.6,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,6,232,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,4,87,232,Guinea,Pita,NA,Feb,1993,NA,Apr,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+930c9a9f801f9c57ea5a5d461bf09645,8f1ca989c951b8f9f3423086947db9ce,85,Lassa mammarenavirus,Seroprevalence - IgG,14,0,Percentage (%),9.8,29.5,Unspecified,NA,NA,NA,NA,NA,105,751,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,4,99,751,Guinea,Gueckedou,NA,Feb,1993,NA,Apr,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+13cdef32a7a9576e547c45ab06c3a4fe,90c8a2cc387e87279b36c040c288fb2d,88,Lassa mammarenavirus,Seroprevalence - IgG,14,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,General population,NA,NA,NA,Guinea,Gueckedou,NA,NA,1993,NA,NA,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+13cdef32a7a9576e547c45ab06c3a4fe,90e9a5b16b6ca5caf5e2bfb065d482d1,88,Lassa mammarenavirus,Seroprevalence - IgG,2.6,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,General population,NA,NA,NA,Guinea,Pita,NA,NA,1993,NA,NA,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+13cdef32a7a9576e547c45ab06c3a4fe,70cc00f3b76762f6eedbef05332a13da,88,Lassa mammarenavirus,Seroprevalence - IgG,12.1,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,99,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,99,Liberia,Bong County,NA,NA,1985,NA,NA,1985,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+13cdef32a7a9576e547c45ab06c3a4fe,2a3e4006251cda13a64d3a67cc52e2cb,88,Lassa mammarenavirus,Seroprevalence - IgG,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,94,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,94,Germany,Hamburg,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+13cdef32a7a9576e547c45ab06c3a4fe,bd2ea804227919b0d2ded02f81c62c8f,88,Lassa mammarenavirus,Seroprevalence - IgG,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,150,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Other,NA,NA,150,Germany,Hamburg,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+92f979111ccebf8764e7f09af3edbe1b,31ba2217f14ea396574c35c622066daf,88,Lassa mammarenavirus,Seroprevalence - Unspecified,0.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,1,150,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Other,NA,NA,150,Germany,Hamburg,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+92f979111ccebf8764e7f09af3edbe1b,0b2e1b40c1b5cb5a127901be7183032b,88,Lassa mammarenavirus,Human delay - symptom onset>admission to care,4.3,0,Days,NA,NA,Mean,NA,NA,1,14,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,12,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+92f979111ccebf8764e7f09af3edbe1b,4bfbb72319446b1defa8478c6257bc70,88,Lassa mammarenavirus,Severity - case fatality rate (CFR),33.3,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,12,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+92f979111ccebf8764e7f09af3edbe1b,fbf43b7e11c79c92c533bc3c07d60d3b,88,Lassa mammarenavirus,Seroprevalence - IgG,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,6,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,12,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+92f979111ccebf8764e7f09af3edbe1b,845f42d1192b9a622f2c8d1de0019119,88,Lassa mammarenavirus,Seroprevalence - IgM,91.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,11,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,12,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+92f979111ccebf8764e7f09af3edbe1b,371ea7afd5283c28350695c0e590d632,88,Lassa mammarenavirus,Seroprevalence - IgM,75,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,9,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,12,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+92f979111ccebf8764e7f09af3edbe1b,d4dc0ea1e75f9bd4b7354fde24e1fe5c,88,Lassa mammarenavirus,Seroprevalence - IgM,14.9,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,7,47,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,47,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+92f979111ccebf8764e7f09af3edbe1b,6d4270fe480d863bea3728cc25ac8d59,88,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,6,7,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,7,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+6ed59e28ccc2eef7c923b0d259231798,2a24004e7c7490e656909f19a2fb4df1,130,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Age;Other,NA,Significant,Adjusted,Both,Community based,General population,0,83,600,Mali,Bougouni District,NA,Feb,2015,NA,Feb,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+6ed59e28ccc2eef7c923b0d259231798,6df64fac5699a2af77656c1307119124,130,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Sex,NA,Not significant,Adjusted,Both,Community based,General population,0,83,600,Mali,Bougouni District,NA,Feb,2015,NA,Feb,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+6ed59e28ccc2eef7c923b0d259231798,abec160c0d492608f38040402cfedc1a,130,Lassa mammarenavirus,Seroprevalence - IgG,33.2,0,Percentage (%),5,57.1,Unspecified,NA,NA,29.4,37.1,CI95%,199,600,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Region;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,0,83,600,Mali,Bougouni District,NA,Feb,2015,NA,Feb,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+6ed59e28ccc2eef7c923b0d259231798,0607671fdbc9b09bad6f6b396f57b3ad,130,Lassa mammarenavirus,Seroprevalence - IgM,0.67,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,600,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,0,83,600,Mali,Bougouni District,NA,Feb,2015,NA,Feb,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+49eb024d2712105290dedd2dd5323c08,169e01ec11313535cc2a15589f00f186,167,Lassa mammarenavirus,Severity - case fatality rate (CFR),36,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,11,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,11,Nigeria,Plateau State,NA,Jan,2016,NA,Aug,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+c175e69252d43049ed0b6e039522f7a0,bb0e1826b0e2fc289f5e65d82ac1e717,167,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation;Other;Sex,Education;Healthcare;Livestock and animal herders;Other,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,34,Nigeria,Plateau State,NA,Jan,2016,NA,Aug,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+db349967bcba352945dcb2e0643967ed,fc4e62e6bdb99a9845ced206764c7ddd,168,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,5,50,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Children,NA,NA,50,Sierra Leone,Segbwema,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+db349967bcba352945dcb2e0643967ed,dbb39f89af72f1b922a6610fe709ce8f,168,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,Percentage (%),0,29.4,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,NA,NA,Age,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Household based,Children,0,14,NA,Sierra Leone,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0173b29dde27c00b828b19488e322c4e,41a854b5c6c6660134147cfc8cc140a9,174,Lassa mammarenavirus,Severity - case fatality rate (CFR),69,0,Percentage (%),8,93,Unspecified,NA,NA,NA,NA,NA,109,158,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,Method,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,1740,Sierra Leone,Kenema Government Hospital,NA,NA,2008,NA,NA,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+0173b29dde27c00b828b19488e322c4e,ba5610b51ea1e7e7f674a24bf1dc991e,174,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,Percentage (%),3,23,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method;Other;Time,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,1740,Sierra Leone,Kenema Government Hospital,NA,NA,2008,NA,NA,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0173b29dde27c00b828b19488e322c4e,511bb1ab74480ca83692a60797d68274,174,Lassa mammarenavirus,Seroprevalence - IgG,18,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,125,688,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,688,Sierra Leone,Kenema Government Hospital,NA,NA,2011,NA,NA,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0173b29dde27c00b828b19488e322c4e,8b9010d5ed0d913d9b481e57149d07c4,174,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Sex,NA,Not significant,Unspecified,Both,Hospital based,Persons under investigation,NA,NA,1740,Sierra Leone,Kenema Government Hospital,NA,NA,2008,NA,NA,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+0173b29dde27c00b828b19488e322c4e,7a3cf2db9ca4a2fab22c86130746e571,174,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,TRUE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Unspecified,Both,Hospital based,Persons under investigation,NA,NA,1740,Sierra Leone,Kenema Government Hospital,NA,NA,2008,NA,NA,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+317696920b8b6de528cdc360b74893a8,0ad6039e224a365ba74a2fefa3722731,225,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,160,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Occupation;Symptoms,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Mixed settings,Mixed groups,NA,NA,160,Djibouti,Djibouti City; Randa,NA,NA,1987,NA,NA,1987,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+5c36dc810c04252d3df604da1cbc657f,510c0d73052df4fdf344ad6951f0496c,252,Lassa mammarenavirus,Human delay - time in care (length of stay),11,0,Days,NA,NA,Median,NA,NA,5,14,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,18,NA,20,Sierra Leone,Kenema District,1,Nov,2011,31,Oct,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+5c36dc810c04252d3df604da1cbc657f,01d2d4535c7de842669333a973d99408,252,Lassa mammarenavirus,Severity - case fatality rate (CFR),38.1,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,8,21,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,18,NA,21,Sierra Leone,Kenema District,1,Nov,2011,31,Oct,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+dc041d85c6bebf8cf54ce0a5144538d6,ca8d8c31c5cd49122f9e04f8ed6b42ca,263,Lassa mammarenavirus,Seroprevalence - Unspecified,0,0,Percentage (%),0,0,Unspecified,NA,NA,NA,NA,NA,0,1088,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Region;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Unspecified,Unspecified,NA,NA,1088,India,Rajasthan;West Bengal;Orissa;Assam;Arunachal Pradesh;Andhra Pradesh;Karnataka;Kerala,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+23ea40c24afce22846f80c56d3062794,96c5a0ceb81156a00c4fb7a68a3f222e,264,Lassa mammarenavirus,Seroprevalence - IFA,6,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,8,132,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Other,20,40,132,Uganda,Karamoja Province,NA,May 05,1984,NA,May 05,1984,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+e5edb3a63c397372ab03de34ab1c00cf,1f7ac772c82f8643acbe107a1a5e5ce1,307,Lassa mammarenavirus,Severity - case fatality rate (CFR),21,0,Percentage (%),5,30,Unspecified,NA,NA,NA,NA,NA,14,68,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Adjusted,NA,Other,TRUE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,NA,NA,68,Sierra Leone,Segbwema,NA,NA,1981,NA,NA,1985,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+e5edb3a63c397372ab03de34ab1c00cf,835898fb0cd6c29ece5fec688e8174ba,307,Lassa mammarenavirus,Severity - case fatality rate (CFR),13,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,10,79,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Other,NA,NA,79,Sierra Leone,Segbwema,NA,NA,1981,NA,NA,1985,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+e5edb3a63c397372ab03de34ab1c00cf,e721b270936b50c4bc33966f49fe3f44,307,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Not adjusted,Female,Hospital based,Pregnant women,NA,NA,68,Sierra Leone,Segbwema,NA,NA,1981,NA,NA,1985,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+e5edb3a63c397372ab03de34ab1c00cf,203fe469a95105c3ebd0be0dbb837ebe,307,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Not significant,Not adjusted,Female,Hospital based,Other,NA,NA,147,Sierra Leone,Segbwema,NA,NA,1981,NA,NA,1985,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+e5edb3a63c397372ab03de34ab1c00cf,06a154d490198d8208f82fb92c3ba4cc,307,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Not significant,Unspecified,Female,Hospital based,Pregnant women,NA,NA,68,Sierra Leone,Segbwema,NA,NA,1981,NA,NA,1985,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+bf4dd61880195d81c6aa3645fa15d341,f32ccc7196807470015c3557229ef7a2,351,Lassa mammarenavirus,Seroprevalence - IFA,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,29,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Post outbreak,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Contact based,Persons under investigation,NA,NA,33,United States,District Of Columbia,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+406d3472798ee4689fa6f80a474a4360,8cec16404e89ea28ccf4dfd0937a90a5,398,Lassa mammarenavirus,Seroprevalence - Unspecified,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,86,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Travel based,Persons under investigation,NA,NA,86,NA,'Tropical Africa',NA,Nov 11,1975,NA,Jun 06,1977,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+012db9a4c08faeb314fd0b2227fd5859,3502cd3213c2ca177e38cd0e90d7c278,416,Lassa mammarenavirus,Severity - case fatality rate (CFR),52,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,12,23,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,6,46,23,Nigeria,Jos,NA,Jan 01,1970,NA,Feb 02,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+012db9a4c08faeb314fd0b2227fd5859,2ac9d4b79325b84bfa52ca8fcdf3236d,416,Lassa mammarenavirus,Human delay - symptom onset>admission to care,4.9,0,Days,NA,NA,Mean,NA,NA,1,12,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,6,46,23,Nigeria,Jos,NA,Jan 01,1970,NA,Feb 02,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+012db9a4c08faeb314fd0b2227fd5859,36a3800f2bb8cec3c28f9f0743e65447,416,Lassa mammarenavirus,Human delay - symptom onset>death,11.6,0,Days,NA,NA,Mean,NA,NA,7,26,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,6,46,23,Nigeria,Jos,NA,Jan 01,1970,NA,Feb 02,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+012db9a4c08faeb314fd0b2227fd5859,37b1a380b40f2efbf07636aee110013a,416,Lassa mammarenavirus,Human delay - symptom onset>discharge/recovery,17.3,0,Days,NA,NA,Mean,NA,NA,7,31,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,6,46,23,Nigeria,Jos,NA,Jan 01,1970,NA,Feb 02,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+09d2b9e41b8dc6d4355418aa977bb9a5,5324a9d88ee2925121222a84697bd6f3,441,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,NA,NA,NA,FALSE,FALSE,Occurrence,Other,NA,Significant,Adjusted,Both,Community based,Outdoor workers,NA,NA,73,Liberia,Bong; Grand Bassa; Lofa; Nimba,NA,NA,2008,NA,NA,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+09d2b9e41b8dc6d4355418aa977bb9a5,d27c79f2307686c866a2a20d3111082a,441,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,NA,NA,NA,FALSE,FALSE,Occurrence,Other,NA,Not significant,Adjusted,Both,Community based,Outdoor workers,NA,NA,73,Liberia,Bong; Grand Bassa; Lofa; Nimba,NA,NA,2008,NA,NA,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+85033603c55eaa99b2249a26805290b6,21c038444fb89d9c08c83f8f778972bf,444,Lassa mammarenavirus,Mutations - evolutionary rate,10.1,-4,Substitutions/site/year,NA,NA,Mean,NA,NA,8.2,12.2,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,11,Nigeria,Ebonyi; Enugu,NA,NA,2012,NA,NA,2016,NP,FALSE,NA,NA,FALSE,FALSE,NA,Mutations
+85033603c55eaa99b2249a26805290b6,d481ab205831fb97d3b52c64abebcbe5,444,Lassa mammarenavirus,Mutations - evolutionary rate,8.4,-4,Substitutions/site/year,NA,NA,Mean,NA,NA,7.2,9.6,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,11,Nigeria,Ebonyi; Enugu,NA,NA,2012,NA,NA,2016,L,FALSE,NA,NA,FALSE,FALSE,NA,Mutations
+85033603c55eaa99b2249a26805290b6,4fc9f1275de2130f1efd7a8801fbc7e5,444,Lassa mammarenavirus,Mutations - evolutionary rate,16.9,-4,Substitutions/site/year,NA,NA,Mean,NA,NA,8.6,25.9,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,11,Nigeria,Ebonyi; Enugu,NA,NA,2012,NA,NA,2016,Z,FALSE,NA,NA,FALSE,FALSE,NA,Mutations
+85033603c55eaa99b2249a26805290b6,b7e8588391a5513cf5825002ccdc32ee,444,Lassa mammarenavirus,Mutations - evolutionary rate,7.7,-4,Substitutions/site/year,NA,NA,Mean,NA,NA,6.2,9.3,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,11,Nigeria,Ebonyi; Enugu,NA,NA,2012,NA,NA,2016,GPC,FALSE,NA,NA,FALSE,FALSE,NA,Mutations
+14ee33e11d549c2ce26e0caa05dd4858,1a13f42b4add5b5181cc635a82e071e6,461,Lassa mammarenavirus,Severity - case fatality rate (CFR),24,0,Percentage (%),24,60,Unspecified,NA,NA,NA,NA,NA,68,284,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Adjusted,NA,Age;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,284,Nigeria,NA,NA,Jan 01,2011,NA,Nov 11,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+14ee33e11d549c2ce26e0caa05dd4858,9751375f7bde763f52f36947e74cf716,461,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Death,Sex,NA,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,284,Nigeria,NA,NA,Jan 01,2011,NA,Nov 11,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+14ee33e11d549c2ce26e0caa05dd4858,53fa9836917bf33df2c0dd03552e63b7,461,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Death,Age;Other,NA,Significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,284,Nigeria,NA,NA,Jan 01,2011,NA,Nov 11,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+14ee33e11d549c2ce26e0caa05dd4858,8b1a39c4ef823e2924b3985a102d20dc,461,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Not significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,284,Nigeria,NA,NA,Jan 01,2011,NA,Nov 11,2015,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+e643a77d6e69510235af88fe79d9bfa3,7ca7df373e7a2d64e937a6a3a2a4a1ba,545,Lassa mammarenavirus,Seroprevalence - IgG,23.6,0,Percentage (%),3.8,54.9,Unspecified,NA,NA,NA,NA,NA,738,3126,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,5,NA,3126,Guinea,NA,NA,Jun 06,1990,NA,Jan 01,1992,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+e643a77d6e69510235af88fe79d9bfa3,e9eb95092a1740c2fddfc263865cbb56,545,Lassa mammarenavirus,Seroprevalence - IgG,NA,0,Percentage (%),2,40,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,5,NA,406,Guinea,NA,NA,Jun 06,1990,NA,Jan 01,1992,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+a7ab005860fa1caba3ba17bae7c7ebb6,4b3e98c0c9e1c353276e073723c3c23f,558,Lassa mammarenavirus,Relative contribution - human to human,22,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,1002,Sierra Leone,Kenema Government Hospital,27,Apr 04,2010,31,Jan 01,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Relative contribution
+dc58ccb401238d09a9ba6452086ea3ac,9fe50032cf04e7c43dcd4b3850a0e43b,560,Lassa mammarenavirus,Relative contribution - human to human,20,0,Percentage (%),NA,NA,Unspecified,NA,NA,15,30,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,27,Apr 04,2010,31,Jan 01,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Relative contribution
+dc58ccb401238d09a9ba6452086ea3ac,7eb9238a3db48928aafbbab9b1f3ece4,560,Lassa mammarenavirus,"Reproduction number (Effective, Re)",0.73,0,No units,NA,NA,Mean,11.7,Maximum,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,Renewal equations / Branching process,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,NA,Liberia;Nigeria,Jos; Zorzor,26,Dec 12,1969,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,Human-human,Reproduction number
+dc58ccb401238d09a9ba6452086ea3ac,64cb91dfe892225e6531a638953cee5a,560,Lassa mammarenavirus,Human delay - generation time,NA,0,Days,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Other,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,NA,Liberia;Nigeria,Jos; Zorzor,26,Dec 12,1969,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,TRUE,NA,Human delay
+dc58ccb401238d09a9ba6452086ea3ac,59f477bdeb94014cc9056e70ae3dcac2,560,Lassa mammarenavirus,Relative contribution - human to human,NA,0,Percentage (%),18.5,26,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,27,Apr 04,2010,31,Jan 01,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Relative contribution
+b705e586dc705035b24d26a6fb9a7385,80880b3291105edf5c2f67af3c566e04,645,Lassa mammarenavirus,Severity - case fatality rate (CFR),14,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,42,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,60,42,Guinea;Liberia;Sierra Leone,Panguma Catholic Hospital (Eastern Province; Sierra Leone); Swedish Free Pentecostal Mission Clinic (Foya); Tellewoyan Memorial Hospital (Voinjama); Curran Lutheran Hospital (Zorzor); Bong Mine Hospital (Bong Town).,NA,Jul 07,1978,NA,Apr 04,1979,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+b705e586dc705035b24d26a6fb9a7385,a45d425e3c0013704b5791445ca49331,645,Lassa mammarenavirus,Human delay - symptom onset>death,NA,0,Days,7,21,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,NA,Guinea;Liberia;Sierra Leone,Panguma Catholic Hospital (Eastern Province; Sierra Leone); Swedish Free Pentecostal Mission Clinic (Foya); Tellewoyan Memorial Hospital (Voinjama); Curran Lutheran Hospital (Zorzor); Bong Mine Hospital (Bong Town).,NA,Jul 07,1978,NA,Apr 04,1979,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+80f74d1d0413175d39f4ef00894321c1,0f3d53b7778251820bf9c4b16622fed6,652,Lassa mammarenavirus,Seroprevalence - IgG,40.3,0,Percentage (%),39,42,Unspecified,NA,NA,NA,NA,NA,102,253,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region;Sex;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Other,NA,NA,253,Guinea,Bantou; Tanganya,NA,May 05,2004,NA,Oct 10,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+80f74d1d0413175d39f4ef00894321c1,f15f99297bb5875a2cfe9306161a2f95,652,Lassa mammarenavirus,Seroprevalence - IgM,2.8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,7,253,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Other,NA,NA,253,Guinea,Bantou; Tanganya,NA,May 05,2004,NA,Oct 10,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+80f74d1d0413175d39f4ef00894321c1,4527925f75f3129529b5722831514666,652,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Other;Sex,NA,Not significant,Adjusted,Both,Community based,Other,NA,NA,253,Guinea,Bantou; Tanganya,NA,May 05,2004,NA,Oct 10,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+f3b641b98c7c31cd7c60b5b40f034fdd,0b4951213e1427b568f3cb132cd33277,661,Lassa mammarenavirus,Seroprevalence - IgG,11.3,0,Percentage (%),10,12.9,Unspecified,NA,NA,9.3,13.3,CI95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,1,NA,977,Guinea,Gueckedou; Lola; Yomou,10,Apr 04,2000,22,Apr 04,2000,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+f3b641b98c7c31cd7c60b5b40f034fdd,f996a08ed13cd923f27e7df708df71c4,661,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Age;Contact with animal;Funeral;Occupation;Other;Sex,Abattoir services;Livestock and animal herders,Not significant,Not adjusted,Both,Population based,General population,1,NA,1424,Guinea,Gueckedou; Lola; Yomou,10,Apr 04,2000,22,Apr 04,2000,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+f3b641b98c7c31cd7c60b5b40f034fdd,913876811dcd25b885f5671cc0bba844,661,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Other,NA,Significant,Not adjusted,Both,Population based,General population,1,NA,1424,Guinea,Gueckedou; Lola; Yomou,10,Apr 04,2000,22,Apr 04,2000,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+f3b641b98c7c31cd7c60b5b40f034fdd,42c156e87b2b7f4126318ad8de4db7f5,661,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Other,NA,Significant,Adjusted,Both,Population based,General population,1,NA,1424,Guinea,Gueckedou; Lola; Yomou,10,Apr 04,2000,22,Apr 04,2000,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+f3b641b98c7c31cd7c60b5b40f034fdd,3b6419129bd77eaa622546c4fa01205c,661,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Contact with animal,NA,Not significant,Adjusted,Both,Population based,General population,1,NA,1424,Guinea,Gueckedou; Lola; Yomou,10,Apr 04,2000,22,Apr 04,2000,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+bd87100e21aebe2d0a5d9e863ee7b9ef,b03edee601da5d393307e248018a384f,669,Lassa mammarenavirus,Seroprevalence - IFA,26,0,Percentage (%),12.1,30.1,Unspecified,NA,NA,NA,NA,NA,248,953,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Level of exposure,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Household based,Mixed groups,NA,NA,953,Sierra Leone,Segbwema; Panguma; Kenema,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+bd87100e21aebe2d0a5d9e863ee7b9ef,5f271805f482e355cefd6069cb99aacd,669,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Household contact,NA,Significant,Not adjusted,Both,Household based,Mixed groups,NA,NA,953,Sierra Leone,Segbwema; Panguma; Kenema,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+bd87100e21aebe2d0a5d9e863ee7b9ef,8692d88d79289beb9d26c08ed3efa0a5,669,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Other,NA,Not significant,Not adjusted,Both,Household based,Mixed groups,NA,NA,953,Sierra Leone,Segbwema; Panguma; Kenema,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+3e0be8c155601659f0e9c615d7a0af07,f4a1cba4247f1a4bc4c5296a80265ce0,670,Lassa mammarenavirus,Severity - case fatality rate (CFR),33,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,6,18,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,NA,NA,18,Sierra Leone,Panguma Hospital,NA,Jan 01,1973,NA,Mar 03,1976,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+3e0be8c155601659f0e9c615d7a0af07,a406bca2f62ecdb7be5247434242927f,670,Lassa mammarenavirus,Severity - case fatality rate (CFR),75,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,9,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,NA,NA,12,Sierra Leone,Nixon Memorial Hospital; Segbwema,NA,NA,1975,NA,NA,1975,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+3e0be8c155601659f0e9c615d7a0af07,ddec17b2919ca0eae362fc856631329d,670,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,40,45,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,45,Sierra Leone,Panguma Hospital,NA,Jan 01,1973,NA,Mar 03,1976,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+3e0be8c155601659f0e9c615d7a0af07,1a93eae09004a68876950d607afe66ef,670,Lassa mammarenavirus,Severity - case fatality rate (CFR),15.9,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,22,138,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,138,Sierra Leone,Panguma Hospital,NA,Jan 01,1973,NA,Mar 03,1976,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+3e0be8c155601659f0e9c615d7a0af07,13e57c180ccbefcd8b18295b3a04558f,670,Lassa mammarenavirus,Severity - case fatality rate (CFR),16.6,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,16,96,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,96,Sierra Leone,Nixon Memorial Hospital; Segbwema,NA,NA,1975,NA,NA,1975,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+3e2dbc3bb54c1e4e9dbc3a6f3ebe2243,b7d026d9f4da20b9573695c0df4a3fd3,678,Lassa mammarenavirus,Mutations - evolutionary rate,NA,NA,Substitutions/site/year,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,120,Nigeria,Edo; Ondo; Ebonyi,1,Jan 01,2018,18,Mar 03,2018,Lineage II - S segment,TRUE,NA,NA,FALSE,TRUE,NA,Mutations
+3e2dbc3bb54c1e4e9dbc3a6f3ebe2243,ea48f5b5086dda6fa39956fc72c9cc17,678,Lassa mammarenavirus,Mutations - evolutionary rate,NA,NA,Substitutions/site/year,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,TRUE,Mid outbreak,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,120,Nigeria,Edo; Ondo; Ebonyi,1,Jan 01,2018,18,Mar 03,2018,Lineage II - L segment,TRUE,NA,NA,FALSE,TRUE,NA,Mutations
+847a4366dd32006ad6d8fcbf9663476a,50f9bf8a29cd2179141f45b047f724ed,693,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,8,4295,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,NA,NA,4295,Central African Republic,"Nola And Ikaumba; The Pre
+Forest
Grassland Of Bozo And Bangassou; The Moist
+Wooded Grassland Of Bouar And Obo; The Dry Wooded
+Rassland Near Mbre; And The Dry Grassland-Of Birao.",NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c05798002a738bdd63d75d796a135372,ba522c17fa90bc0665a2562a8ce2b3a0,696,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,1899,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,1.5,NA,1899,Kenya,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+281c8656433ac081595ed5b586865e86,e60ad6c2615b6813705494101d554ba6,729,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,253,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,0,NA,253,Gabon,Haut-Ogooue,13,Feb 02,1980,19,Mar 03,1980,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c2b427ce0271b9f77f59132a763cf985,b843e69294acc4f6a6ffe65dc62e62ed,742,Lassa mammarenavirus,Seroprevalence - IgG,24,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,75,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,75,Guinea;Nigeria,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+4922f266e32d24120aa52f5e6f4ac8d6,be1ca62d42439e2457d8c5a3e3634c7e,757,Lassa mammarenavirus,Seroprevalence - IgG,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,53,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Contact based,Healthcare workers,22,62,53,Sweden,Sahlgrenska University Hospital; Gothenburg,NA,Mar 03,2016,NA,NA,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0243341efb6db404776d7bced47be83b,e3f23408e88e9408ea23f4e8f0f95803,773,Lassa mammarenavirus,Seroprevalence - IFA,0.06,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,3,5070,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,NA,NA,5070,Cameroon;Central African Republic;Chad;Congo; Rep.;Equatorial Guinea;Gabon,NA,NA,Jan 01,1985,NA,Jun 06,1987,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+f8d73a4cf0d690616a47af76c306ee1c,35f90e802fb7c2e0da05f635d9950f38,799,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,5,715,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,715,Central African Republic,"Bangassou; Botambi; Bouar; Bouboui; Bozo; Gomoka
+Zemio",NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+efb15bb557943d996a14bbe398aa6b8f,4aba740b0b0737312cd6e11a2c4b596e,832,Lassa mammarenavirus,Seroprevalence - Unspecified,13,0,Percentage (%),9,17,Unspecified,NA,NA,NA,NA,NA,27,206,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Contact based,Persons under investigation,NA,NA,206,Sierra Leone,Panguma; Tongo,23,Sep 09,1972,15,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+efb15bb557943d996a14bbe398aa6b8f,96d770560fd2f6752e4abdc5281b36a2,832,Lassa mammarenavirus,Severity - case fatality rate (CFR),38,0,Percentage (%),33,43,Unspecified,NA,NA,NA,NA,NA,24,63,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,63,Sierra Leone,Panguma; Tongo,1,Oct 10,1970,1,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+efb15bb557943d996a14bbe398aa6b8f,bfcbd700a15163e5dbeee175f00cff80,832,Lassa mammarenavirus,Severity - case fatality rate (CFR),NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,6,9,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,NA,NA,9,Sierra Leone,Panguma; Tongo,1,Oct 10,1970,1,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+efb15bb557943d996a14bbe398aa6b8f,eadc14463cf8bfd6a758b1e921edb5b3,832,Lassa mammarenavirus,Seroprevalence - Unspecified,22,0,Percentage (%),19,33,Unspecified,NA,NA,NA,NA,NA,12,54,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Occupation,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,54,Sierra Leone,Panguma,23,Sep 09,1972,15,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+efb15bb557943d996a14bbe398aa6b8f,e1433008ca4978a1a429398924fb513a,832,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,Percentage (%),0,13,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,NA,Sierra Leone,Segbwema; Serabu; Koidu; Mobai,23,Sep 09,1972,15,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+efb15bb557943d996a14bbe398aa6b8f,56e8c9c0bf7b60da8ec16adbfa3c6134,832,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Household contact;Other,NA,Significant,Not adjusted,Both,Household based,Mixed groups,NA,NA,206,Sierra Leone,Panguma; Tongo,23,Sep 09,1972,15,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+efb15bb557943d996a14bbe398aa6b8f,9e16ac8d0a2c735764238421334e7de1,832,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Attack Rate,Age,NA,Significant,Not adjusted,Both,Population based,General population,NA,NA,NA,Sierra Leone,Panguma; Tongo,1,Oct 10,1970,1,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+efb15bb557943d996a14bbe398aa6b8f,310b3640732ceeac4d14f071a56128fb,832,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Attack Rate,Sex,NA,Not significant,Not adjusted,Both,Population based,General population,NA,NA,NA,Sierra Leone,Panguma; Tongo,1,Oct 10,1970,1,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+efb15bb557943d996a14bbe398aa6b8f,c6d8a1e3f21015c3b3304391071073c4,832,Lassa mammarenavirus,Seroprevalence - Unspecified,6,0,Percentage (%),0,11.8,Unspecified,NA,NA,NA,NA,NA,16,255,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Other;Region;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Household based,General population,NA,NA,255,Sierra Leone,Panguma; Tongo,23,Sep 09,1972,15,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+efb15bb557943d996a14bbe398aa6b8f,ab0a9143f22dc132dd79e5d7ec20e840,832,Lassa mammarenavirus,Attack rate,2.2,-3,No units,0,8.1,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,NA,NA,NA,Sierra Leone,Panguma; Tongo,1,Oct 10,1970,1,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Attack rate
+452fe878a52a8036969508cf06d72d27,a48a2262be6e38eb46594af9b6b962b1,838,Lassa mammarenavirus,Seroprevalence - IFA,14.9,0,Percentage (%),3.8,40.4,Unspecified,NA,NA,NA,NA,NA,95,637,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Other;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,637,Liberia,Lofa; Grand Cape Mount; Mont-Serrado; Nimba; Bong; Grand Bassa; Grand Gedeh; Maryland,NA,NA,1979,NA,NA,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+5e7d20c0d0d52495025dc8a09f656096,0be0ea350e0bb6631dd43309abfc97ad,840,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,Percentage (%),6,28,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Other;Time,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,NA,Liberia,Zorzor; Ganta; Paynesville,NA,Jul 07,1980,NA,Apr 04,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+369dd01f0a624a8e284ed68ed5347d7f,5c4a0bf46e4db5d408a8190e13b5c690,841,Lassa mammarenavirus,Seroprevalence - IFA,8.4,0,Percentage (%),4.1,22.9,Unspecified,NA,NA,NA,NA,NA,71,844,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Occupation;Other;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Healthcare workers,NA,NA,844,Liberia,Lofa County; Bong County; Nimba County; Monrovia; Bassa County,NA,Oct 10,1976,NA,Oct 10,1977,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+2e4ff9c8065b9faadd3a386783fc93e3,e08eb13e6fdf0999863f491b4144e054,842,Lassa mammarenavirus,Human delay - incubation period,NA,0,Days,7,17,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Healthcare workers,45,69,3,Nigeria,Lassa,12,Jan 01,1969,20,Feb 02,1969,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+9c644bcef9290d8f7f6ac679801ec1b2,9589ddaef6b506922e36efec684f18b7,845,Lassa mammarenavirus,Severity - case fatality rate (CFR),9.3,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,23,246,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Adjusted,NA,Age;Other;Sex;Symptoms,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,0,NA,246,Liberia,Zorzor,1,Jul 07,1980,30,Apr 04,1986,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+9c644bcef9290d8f7f6ac679801ec1b2,8e58a62d0ab2e0d955ee81a4aa1eae59,845,Lassa mammarenavirus,Severity - case fatality rate (CFR),15.6,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,5,32,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,NA,NA,NA,Liberia,Zorzor,1,Jul 07,1980,30,Apr 04,1986,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+9c644bcef9290d8f7f6ac679801ec1b2,a5a71e3300a4a4ad2a7adfcdd6baaf65,845,Lassa mammarenavirus,Severity - case fatality rate (CFR),26.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,15,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Children,NA,12,15,Liberia,Zorzor,1,Jul 07,1980,30,Apr 04,1986,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+877ba20126431371f1dc0fcafca15cbd,c3f2b3d6843e927c6ab6de7b08974d3d,854,Lassa mammarenavirus,Severity - case fatality rate (CFR),65,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,22,34,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,34,Nigeria,Aboh Mbaise; Aba; Owerri,1,Jan 01,1989,31,Mar 03,1989,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+877ba20126431371f1dc0fcafca15cbd,6264f37b5714adc49e1cf77a3645e1d5,854,Lassa mammarenavirus,Human delay - time in care (length of stay),11.5,0,Days,NA,NA,Mean,4.97,Standard deviation (Sd),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,Aboh Mbaise,1,Jan 01,1989,31,Mar 03,1989,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+877ba20126431371f1dc0fcafca15cbd,788279302287876440c8c54edcad144b,854,Lassa mammarenavirus,Seroprevalence - IFA,1,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,6,415,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Community based,Unspecified,NA,NA,415,Nigeria,Aboh Mbaise,1,Jan 01,1989,31,Mar 03,1989,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+877ba20126431371f1dc0fcafca15cbd,fc0141823b8aa6276c9148568aa4d97c,854,Lassa mammarenavirus,Seroprevalence - IFA,1,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,2,175,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,175,Nigeria,Aboh Mbaise,1,Jan 01,1989,31,Mar 03,1989,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+877ba20126431371f1dc0fcafca15cbd,e7bdfe380ebb6d4dedeb6e48c26d61cc,854,Lassa mammarenavirus,Seroprevalence - IFA,2,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,5,240,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,240,Nigeria,Aba,1,Jan 01,1989,31,Mar 03,1989,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+877ba20126431371f1dc0fcafca15cbd,b22573b3f2fe900553c2350cfc728dfa,854,Lassa mammarenavirus,Seroprevalence - IFA,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,47,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,47,Nigeria,University Of Nigeria Teaching Hospital,1,Jan 01,1989,31,Mar 03,1989,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+8d6faf917bbcba52c88bbc32b69c442b,a056179565efb6e20952ab917ae238f0,870,Lassa mammarenavirus,Severity - case fatality rate (CFR),100,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,2,2,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Children,NA,NA,2,Liberia,Curran Lutheran Hospital; Zorzor,NA,Jul 07,1980,NA,Apr 04,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+8d6faf917bbcba52c88bbc32b69c442b,337f59d4854483bcc9b178c29b786a50,870,Lassa mammarenavirus,Severity - case fatality rate (CFR),66.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,2,3,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,NA,NA,3,Liberia,Curran Lutheran Hospital; Zorzor,NA,Jul 07,1980,NA,Apr 04,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+8d6faf917bbcba52c88bbc32b69c442b,eec6c86eebc035ec04f29cec211633dd,870,Lassa mammarenavirus,Severity - case fatality rate (CFR),13.6,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,6,44,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,Age;Other;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,44,Liberia,Curran Lutheran Hospital; Zorzor,NA,Jul 07,1980,NA,Apr 04,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+66213446c64b9b2209d5ca3182f75f87,953e8d9b3bd5bc3811665906cb2f8096,871,Lassa mammarenavirus,Seroprevalence - IFA,1.5,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,2,135,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Children,0,12,161,Liberia,Curran Lutheran Hospital; Zorzor; Lofa County,NA,Feb 02,1982,NA,Feb 02,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+66213446c64b9b2209d5ca3182f75f87,ba8fcda8e13538dea5691ad229a13f6b,871,Lassa mammarenavirus,Severity - case fatality rate (CFR),27,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,15,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Children,0,12,15,Liberia,Zorzor; Lofa County; Suakoko; Bong County,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+66213446c64b9b2209d5ca3182f75f87,cbef66753a06b2c057dff0dc08781dd9,871,Lassa mammarenavirus,Severity - case fatality rate (CFR),17,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,3,18,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,NA,NA,18,Liberia,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+363929db83a192487ee755aeb78234ad,bcbb9b2e6f8eede9f3ed1db064fb8888,873,Lassa mammarenavirus,Severity - case fatality rate (CFR),36,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,11,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,11,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+363929db83a192487ee755aeb78234ad,904eddbf012ec8cf659b421d374df5d6,873,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,2,17,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,17,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+363929db83a192487ee755aeb78234ad,73802079ed8e0b095bb12fea0b058e0d,873,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,40,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,40,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+363929db83a192487ee755aeb78234ad,dad891f26243e4a22a1556a25c5ac867,873,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,22,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Contact based,Persons under investigation,NA,NA,22,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+363929db83a192487ee755aeb78234ad,cb8fa57f2e72b8c17c9ed1cd3f54d7cd,873,Lassa mammarenavirus,Seroprevalence - Unspecified,3,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,133,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Community based,General population,NA,NA,133,Liberia,Zigida,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+9736e3b06a6f64dec16c8919ba6b6b48,f1de721694d49a5ab505b4df216bda69,874,Lassa mammarenavirus,Severity - case fatality rate (CFR),8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,1,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,12,Sierra Leone,Panguma Catholic Hospital; Eastern Province,23,Sep 09,1972,15,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+9736e3b06a6f64dec16c8919ba6b6b48,f2b659870f6ac7ab9d11e60723d0f37c,874,Lassa mammarenavirus,Human delay - symptom onset>admission to care,NA,0,Days,4,9,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,12,Sierra Leone,Panguma Catholic Hospital; Eastern Province,23,Sep 09,1972,15,Oct 10,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+b532584cc829943f3578dde34aed2fd2,e150021fda7fc727fe8b848c7bfdc932,920,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Viremia,Other,NA,Not significant,Unspecified,Unspecified,Community based,Persons under investigation,NA,NA,NA,Sierra Leone,East,NA,NA,1977,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+b532584cc829943f3578dde34aed2fd2,2e364666f10f2e7dac282e28ef2e6cba,920,Lassa mammarenavirus,Severity - case fatality rate (CFR),15.6,0,Percentage (%),5,76,Unspecified,NA,NA,NA,NA,NA,53,333,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,Other,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,441,Sierra Leone,East,NA,NA,1977,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+b532584cc829943f3578dde34aed2fd2,e0ac6eee0222f5ccaa4b2ad11e698e57,920,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,East,NA,NA,1977,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+b532584cc829943f3578dde34aed2fd2,4bee2f4fbd6449b264f70228d615913d,920,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Not significant,Not adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,East,NA,NA,1977,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+40a8d7b386c3f896cdd648fe9c612220,46c824eef7f75db4f319f9a91f792b5f,921,Lassa mammarenavirus,Severity - case fatality rate (CFR),16.5,0,Percentage (%),15.2,22.2,Unspecified,NA,NA,NA,NA,NA,73,441,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,441,Sierra Leone,East,NA,Feb 02,1977,NA,Jan 01,1979,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+8053eeae2c42401c08b2ba768fbb716b,995e707e47195bc6d36ad92f481e852a,941,Lassa mammarenavirus,Seroprevalence - IFA,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,381,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,381,Madagascar,Antananarivo; Manndoto; Andasibe; Tsiroanomandidy; Ampijoroa,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+386ed51b365ba59e743b3e4b83bde542,9eb8fc365069a8c780f7c5a2f1504fc1,1012,Lassa mammarenavirus,Seroprevalence - IgG,12,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,18,53,64,Guinea,Macenta,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+386ed51b365ba59e743b3e4b83bde542,f1072dad5e8b2476fc8a668fa692432a,1012,Lassa mammarenavirus,Seroprevalence - IgG,20,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,18,53,149,Guinea,Gueckedou,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+386ed51b365ba59e743b3e4b83bde542,482318a86f99a92d7ad3278804904b5f,1012,Lassa mammarenavirus,Seroprevalence - IgG,20,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,18,53,50,Côte d'Ivoire,Abidjan; Northeastern Region,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+386ed51b365ba59e743b3e4b83bde542,73939c6fb1241b39c73c487a97cd046f,1012,Lassa mammarenavirus,Seroprevalence - IgG,3.8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,18,53,480,Ghana,Tamale; Agogo; Kumasi,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+386ed51b365ba59e743b3e4b83bde542,8a62c41b2e0cf72b75cf7b219924afcb,1012,Lassa mammarenavirus,Seroprevalence - IgG,9.9,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,18,53,101,Benin,Central Region,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+386ed51b365ba59e743b3e4b83bde542,77cb14c0e5b4f567b8d2b5add13a4766,1012,Lassa mammarenavirus,Seroprevalence - IgG,10.3,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,18,53,116,Nigeria,Southeast,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+364c7701219a82380347adddb9bace5b,80ea2c35376d2d9fa8617918faa3fa76,1033,Lassa mammarenavirus,Severity - case fatality rate (CFR),29,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,25,Nigeria,Edo North; Central Senatorial District Of Edo State,NA,Nov 11,2005,NA,Feb 02,2008,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+364c7701219a82380347adddb9bace5b,44b42bfd7e5254fd8fd05cddc64aa68f,1033,Lassa mammarenavirus,Seroprevalence - IgG,1.8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,8,451,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,451,Nigeria,Edo North; Central Senatorial District Of Edo State,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+364c7701219a82380347adddb9bace5b,eec72961d34daf030e8c11768925ffe8,1033,Lassa mammarenavirus,Seroprevalence - IgM,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,451,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,451,Nigeria,Edo North; Central Senatorial District Of Edo State,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0f94ce4f9e4412effb3407bb26685a1a,008cacc2750d4aa196367e90d02b6f02,1080,Lassa mammarenavirus,Severity - case fatality rate (CFR),61,0,Percentage (%),29,87,Unspecified,NA,NA,NA,NA,NA,22,36,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Age;Other;Sex;Symptoms,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Mixed groups,NA,NA,84,Sierra Leone,Bo District,NA,Apr 04,2011,NA,Feb 02,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+bd5e179ceac6d7d3a08d2686781dd8c8,93807e29334d097a1889933eea3465e4,1173,Lassa mammarenavirus,Severity - case fatality rate (CFR),63.2,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,12,19,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,19,Nigeria,Ondo State,1,Dec 12,2015,30,Apr 04,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+bd5e179ceac6d7d3a08d2686781dd8c8,87a6367554402df1ef15864738777b46,1173,Lassa mammarenavirus,Human delay - symptom onset>admission to care,2,0,Days,NA,NA,Median,NA,NA,0,17,Unspecified,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,19,Nigeria,Ondo State,1,Dec 12,2015,30,Apr 04,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+492d3911497a4f807784c3d85d7cd131,8728056773a18a50630c701d2fb9ed75,1181,Lassa mammarenavirus,Severity - case fatality rate (CFR),28,0,Percentage (%),23,44,Unspecified,NA,NA,NA,NA,NA,18,64,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,908,Nigeria,Irrua,NA,Jan 01,2007,NA,Dec 12,2007,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+ee9a2b7c5f5092606151f83de44d102f,1ec9b42f5736b4296847130e7e713731,1183,Lassa mammarenavirus,Severity - case fatality rate (CFR),43.9,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,1,Jan 01,2017,25,Mar 03,2017,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+ee9a2b7c5f5092606151f83de44d102f,982f9dbb0b5ef401a5202d5cc40b4a86,1183,Lassa mammarenavirus,Severity - case fatality rate (CFR),25.8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,1,Jan 01,2018,25,Mar 03,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+c287635d5c04628324bbaae210d8feaf,0b2c5c0260f18fa22b37de729d026d93,1234,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,10,458,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Community based,General population,NA,NA,458,Nigeria,Benue River,NA,NA,1965,NA,NA,1966,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c287635d5c04628324bbaae210d8feaf,456b2064f939b2e29c1f151247181d39,1234,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,5,712,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Other,Other,NA,NA,712,Congo; Dem. Rep.;Côte d'Ivoire;Ethiopia;Gabon;Guinea;Kenya;Liberia;Mali;Niger;Nigeria;Tanzania,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c287635d5c04628324bbaae210d8feaf,07019cfcfb598463e873b4d67fef7305,1234,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,23,281,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Community based,General population,NA,NA,281,Nigeria,Ibadan,NA,NA,1965,NA,NA,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+12480e4884ed73b65076b7ceea42f1a6,db390799a0898394abcc133242cf771c,1235,Lassa mammarenavirus,Seroprevalence - IFA,35,0,Percentage (%),31,45,Unspecified,NA,NA,NA,NA,NA,360,1024,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,15,65,1024,Sierra Leone,Niahun; Konia,NA,NA,1978,NA,NA,1981,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+12480e4884ed73b65076b7ceea42f1a6,4424291fc060d4b81e6e52d8a1b32485,1235,Lassa mammarenavirus,Seroprevalence - IFA,22,0,Percentage (%),16,50,Unspecified,NA,NA,NA,NA,NA,108,496,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Level of exposure;Occupation;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Healthcare workers,15,65,496,Sierra Leone,Eastern Province,NA,NA,1972,NA,NA,1983,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+12480e4884ed73b65076b7ceea42f1a6,4f9912e96a60abe2808a55347ac613d3,1235,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Occupation,Healthcare,Significant,Not adjusted,Both,Mixed settings,Mixed groups,15,65,NA,Sierra Leone,Eastern Province,NA,NA,1972,NA,NA,1983,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+12480e4884ed73b65076b7ceea42f1a6,9af76bae59c9802d766af498e598e29f,1235,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Close contact;Occupation,Healthcare,Significant,Adjusted,Both,Mixed settings,Mixed groups,15,65,NA,Sierra Leone,Eastern Province,NA,NA,1972,NA,NA,1983,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+12480e4884ed73b65076b7ceea42f1a6,c5e8148ec2d022d7142ac2596db7b43e,1235,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Close contact;Occupation,Healthcare,Not significant,Adjusted,Both,Mixed settings,Mixed groups,15,65,NA,Sierra Leone,Eastern Province,NA,NA,1972,NA,NA,1983,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+8fdea1afb902a4cfacf42853b8e222e6,23e14f4fa1116affea0cafcd47c61abf,1254,Lassa mammarenavirus,Severity - case fatality rate (CFR),29,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,14,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,Persons under investigation,1,56,14,Liberia,Bong; Nimba; Montserrado,NA,Jan 01,2016,NA,Jun 06,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+8fdea1afb902a4cfacf42853b8e222e6,346f64dd3ae36d3ec9271853f1c9174b,1254,Lassa mammarenavirus,Human delay - other human delay (go to section),6.5,0,Days,NA,NA,Median,NA,NA,0,31,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,Persons under investigation,1,56,14,Liberia,Bong; Nimba; Montserrado,NA,Jan 01,2016,NA,Jun 06,2016,NA,FALSE,Symptom Onset/Fever,Specimen Collection,FALSE,FALSE,NA,Human delay
+8fdea1afb902a4cfacf42853b8e222e6,b72f8c5cefa178875deef719bd0aa1dd,1254,Lassa mammarenavirus,Human delay - other human delay (go to section),6,0,Days,NA,NA,Median,NA,NA,2,64,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,Persons under investigation,1,56,14,Liberia,Bong; Nimba; Montserrado,NA,Jan 01,2016,NA,Jun 06,2016,NA,FALSE,Specimen Collection,Test Result,FALSE,FALSE,NA,Human delay
+3f8d488ad99d280827890d24376d99f2,ff58b77f615977aafa728459a470d385,1266,Lassa mammarenavirus,Seroprevalence - IgG,7.4,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,22,297,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,297,Nigeria,Borno State,NA,Sep 09,2011,NA,Feb 02,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+26839290fc754199f5fb8287714a2689,45fe31c3a29973da9f18a905e6125a77,1272,Lassa mammarenavirus,Severity - case fatality rate (CFR),59.6,0,Percentage (%),0,100,Unspecified,NA,NA,NA,NA,NA,28,47,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,Age;Other;Region;Sex;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,47,Nigeria,Taraba; Edo; Lagos; Bauchi; Rivers; Gombe; Ekiti,NA,Oct 10,2015,NA,Feb 02,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+26839290fc754199f5fb8287714a2689,a3b5a0902a44978a85927404eb385d56,1272,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Other,NA,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,47,Nigeria,Taraba; Edo; Lagos; Bauchi; Rivers; Gombe; Ekiti,NA,Oct 10,2015,NA,Feb 02,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+26839290fc754199f5fb8287714a2689,c8d92a925eb9eb8ad62b05e86e3a878d,1272,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Cormobidity;Other;Sex,NA,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,47,Nigeria,Taraba; Edo; Lagos; Bauchi; Rivers; Gombe; Ekiti,NA,Oct 10,2015,NA,Feb 02,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+2c298b19cc69c9ac1aeedf4b8178f350,d343a5b2eeebc32bf57e2a1ae6c67e70,1310,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,258,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Mixed settings,Mixed groups,NA,NA,258,Nigeria,Onitsha; Enugu; Ibadan; Afikpo,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+44a24f3247ecc8b57a3f5eb494d61aad,21015be64132869198b0502da8564184,1328,Lassa mammarenavirus,Severity - case fatality rate (CFR),8.8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,8,90,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,90,Sierra Leone,Kenema,NA,Sep 09,2002,NA,Jul 07,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+44a24f3247ecc8b57a3f5eb494d61aad,cf4ad98d394cbc11059bea25d4fc02e0,1328,Lassa mammarenavirus,Attack rate,3.1,-3,No units,1.5,5.1,Unspecified,NA,NA,2.5,3.8,CI95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Household based,Other,NA,NA,28882,Sierra Leone,Central Region; Eastern Region,NA,Sep 09,2002,NA,Jul 07,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Attack rate
+44a24f3247ecc8b57a3f5eb494d61aad,1678b112253058b8ef23efe592a850b5,1328,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Occurrence,Contact with animal;Other,NA,Significant,Not adjusted,Both,Household based,Other,NA,NA,90,Sierra Leone,Central Region; Eastern Region,NA,Sep 09,2002,NA,Jul 07,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+44a24f3247ecc8b57a3f5eb494d61aad,63d3af49a3cf62f7c0f3580c15138d93,1328,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Occurrence,Other,NA,Not significant,Not adjusted,Both,Household based,Other,NA,NA,90,Sierra Leone,Central Region; Eastern Region,NA,Sep 09,2002,NA,Jul 07,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+44a24f3247ecc8b57a3f5eb494d61aad,deecabcdd8318e7c6ab19a5595fccd10,1328,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Occurrence,Contact with animal;Other,NA,Significant,Adjusted,Both,Household based,Other,NA,NA,90,Sierra Leone,Central Region; Eastern Region,NA,Sep 09,2002,NA,Jul 07,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+44a24f3247ecc8b57a3f5eb494d61aad,475e47fd4550d2c7847ff1249b11aa6f,1328,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Occurrence,Other,NA,Not significant,Adjusted,Both,Household based,Other,NA,NA,90,Sierra Leone,Central Region; Eastern Region,NA,Sep 09,2002,NA,Jul 07,2004,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+f853b150f2bd62e070a363fb1fb10150,7fca75997e8977f04683ba18cffc2413,1343,Lassa mammarenavirus,Seroprevalence - Unspecified,3.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,6,165,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Mixed groups,NA,NA,165,Liberia,Monrovia; Bong County; Loffa County,NA,Oct 10,1974,NA,Dec 12,1974,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+28e816d95022a467c630f5b9d3d7ccdc,f4541d800a1eed62473baa48ac7bc075,1368,Lassa mammarenavirus,Seroprevalence - IgG,15,0,Percentage (%),8,38,Unspecified,NA,NA,NA,NA,NA,48,311,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,311,Guinea,Kindia; Faranah; Kissidougou; Macenta;  N’zérékoré,NA,Mar 03,1996,NA,Dec 12,1999,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+28e816d95022a467c630f5b9d3d7ccdc,82ead605b2aef86ccd5dedf0c6b836f3,1368,Lassa mammarenavirus,Seroprevalence - IgM,7,0,Percentage (%),0,25,Unspecified,NA,NA,NA,NA,NA,22,311,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,311,Guinea,Kindia; Faranah; Kissidougou; Macenta;  N’zérékoré,NA,Mar 03,1996,NA,Dec 12,1999,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+28e816d95022a467c630f5b9d3d7ccdc,63d2fc74a6db0760b4c0dd72dae30bb9,1368,Lassa mammarenavirus,Human delay - symptom onset>admission to care,8.7,0,Days,NA,NA,Mean,0.6,Standard Error (SE),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,311,Guinea,Kindia; Faranah; Kissidougou; Macenta;  N’zérékoré,NA,Mar 03,1996,NA,Dec 12,1999,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+28e816d95022a467c630f5b9d3d7ccdc,7d1b3d272a94b7756c7ce12441dbd6c9,1368,Lassa mammarenavirus,Severity - case fatality rate (CFR),18,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,22,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,22,Guinea,Kindia; Faranah; Kissidougou; Macenta;  N’zérékoré,NA,Mar 03,1996,NA,Dec 12,1999,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+28e816d95022a467c630f5b9d3d7ccdc,d026aec3e4c5fff1ef176bdfd3759443,1368,Lassa mammarenavirus,Human delay - admission to care>death,3.3,0,Days,NA,NA,Mean,1.2,Standard Error (SE),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,22,Guinea,Kindia; Faranah; Kissidougou; Macenta;  N’zérékoré,NA,Mar 03,1996,NA,Dec 12,1999,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+28e816d95022a467c630f5b9d3d7ccdc,af47ca6dd9a8f8263b238f78ab19e33d,1368,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Infection,Other,NA,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Guinea,Kindia; Faranah; Kissidougou; Macenta;  N’zérékoré,NA,Mar 03,1996,NA,Dec 12,1999,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+28e816d95022a467c630f5b9d3d7ccdc,8eb0f994a789bffee11c38be2d3cd7b9,1368,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Other,NA,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Guinea,Kindia; Faranah; Kissidougou; Macenta;  N’zérékoré,NA,Mar 03,1996,NA,Dec 12,1999,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+0bd38d21cdb15df1cec05bd98bfb2917,9d9e15b05c7ccb3c7680cf5ca72e3df7,1386,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,6,552,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,552,Nigeria,Jos; Lafia; Maiduguri,NA,Dec 12,1992,NA,Mar 03,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0bd38d21cdb15df1cec05bd98bfb2917,fe957a8e59d8b27f5335b7fb5a1b7058,1386,Lassa mammarenavirus,Seroprevalence - Unspecified,16.1,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,10,62,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Community based,Unspecified,NA,NA,62,Nigeria,Lafia,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+0bd38d21cdb15df1cec05bd98bfb2917,a2d3b0ce629df8cd7ce3b659d1c656fa,1386,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Serology,Occupation,Other,Significant,Not adjusted,Unspecified,Hospital based,Healthcare workers,NA,NA,NA,Nigeria,Jos; Lafia; Maiduguri,NA,Dec 12,1992,NA,Mar 03,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+0bd38d21cdb15df1cec05bd98bfb2917,2303144a7fbba857553f14ef7e6e7a61,1386,Lassa mammarenavirus,Seroprevalence - IgG,12.3,0,Percentage (%),1.2,27.3,Unspecified,NA,NA,NA,NA,NA,63,552,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Occupation;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Healthcare workers,NA,NA,552,Nigeria,Jos; Lafia; Maiduguri,NA,Dec 12,1992,NA,Mar 03,1993,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+62761cb33833602c1d1d4cecfdc3fea8,d32b445a5c38f73261c757fefba5eb60,1413,Lassa mammarenavirus,Severity - case fatality rate (CFR),31,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,61,198,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,198,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+62761cb33833602c1d1d4cecfdc3fea8,28a0a15b88e29b80d8c64f91e8ce6380,1413,Lassa mammarenavirus,Severity - case fatality rate (CFR),36,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,61,170,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,170,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+62761cb33833602c1d1d4cecfdc3fea8,46fdab670bfc0a7575d4067740eaa059,1413,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age,NA,Significant,Not adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+62761cb33833602c1d1d4cecfdc3fea8,dad1728605b1258608a4d69e9a8d860b,1413,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Occupation;Sex,Education;Healthcare;Livestock and animal herders;Other;Public Transport,Not significant,Not adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+62761cb33833602c1d1d4cecfdc3fea8,c506abf35d7e0ca3d1cefbf7b57e78ae,1413,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age,NA,Significant,Not adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+62761cb33833602c1d1d4cecfdc3fea8,ae045d1bfbfe262731f0003acdad8aa7,1413,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Occupation;Other;Sex,Education;Healthcare;Livestock and animal herders;Other;Public Transport,Not significant,Not adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+62761cb33833602c1d1d4cecfdc3fea8,5205e4327a960b9d490353bb4f2576ad,1413,Lassa mammarenavirus,Human delay - symptom onset>admission to care,6.5,0,Days,NA,NA,Median,NA,NA,4,10,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Other,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,174,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+62761cb33833602c1d1d4cecfdc3fea8,8040c0e55aef8f055c5347621ff6ff2a,1413,Lassa mammarenavirus,Human delay - admission to care>discharge/recovery,10,0,Days,NA,NA,Median,NA,NA,8,13,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,101,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+62761cb33833602c1d1d4cecfdc3fea8,d8e8b16e84e11555adc5e210cf5ee557,1413,Lassa mammarenavirus,Human delay - admission to care>death,2,0,Days,NA,NA,Median,NA,NA,1,4,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,57,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+62761cb33833602c1d1d4cecfdc3fea8,21297e3aab54cd59f55effd742418244,1413,Lassa mammarenavirus,Human delay - symptom onset>discharge/recovery,16,0,Days,NA,NA,Median,NA,NA,13,23,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,98,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+62761cb33833602c1d1d4cecfdc3fea8,eb1c8063dd91cfc1ac988100ecd9c1a8,1413,Lassa mammarenavirus,Human delay - symptom onset>death,10,0,Days,NA,NA,Median,NA,NA,7,14,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,52,Nigeria,Edo State,NA,Jan 01,2009,NA,Dec 12,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+d589f643daac36d48b664c5155dd4629,e02914a0f56a9807bbe4e6ed512ce4ea,1426,Lassa mammarenavirus,Severity - case fatality rate (CFR),60,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,24,40,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,40,Nigeria,Irrua,NA,NA,2008,NA,NA,2013,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+d589f643daac36d48b664c5155dd4629,b30101c632ef1b644141b4663c895e1c,1426,Lassa mammarenavirus,Severity - case fatality rate (CFR),81,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,54,67,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,67,Sierra Leone,Kenema,NA,NA,2008,NA,NA,2013,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+d589f643daac36d48b664c5155dd4629,5ddfd446c89ca5cd61d0869a127d7b6a,1426,Lassa mammarenavirus,Human delay - symptom onset>admission to care,9.3,0,Days,NA,NA,Mean,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,107,Nigeria;Sierra Leone,Irrua; Kenema,NA,NA,2008,NA,NA,2013,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+d2ecc47171bdd43a29fed1a9e927fe9f,d86612a916a186421a9e32137bf21164,1433,Lassa mammarenavirus,Severity - case fatality rate (CFR),NA,0,Percentage (%),14.8,56,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,Unspecified,NA,Time,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema District; Kailahun District,NA,Jan 01,1996,NA,Dec 12,1997,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+6e33abaceb1f0f9db416faec8fee5021,cbfc77e7a43a587f1829f40dbe269c31,1444,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Other;Sex,NA,Not significant,Unspecified,Both,Hospital based,Children,0,15,373,Nigeria,Irrua; Edo State,1,Dec 12,2009,30,Nov 11,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+6e33abaceb1f0f9db416faec8fee5021,8ea17ef9e696a9bf23f010a832d1a338,1444,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Other,NA,Significant,Unspecified,Both,Hospital based,Children,0,15,373,Nigeria,Irrua; Edo State,1,Dec 12,2009,30,Nov 11,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+6e33abaceb1f0f9db416faec8fee5021,385dfed1bc60aacfe06db4f15921829d,1444,Lassa mammarenavirus,Severity - case fatality rate (CFR),NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,3,13,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Children,0,15,13,Nigeria,Irrua; Edo State,1,Dec 12,2009,30,Nov 11,2010,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+f14b287ccc8da2a837c4d9d3ae2b3394,41ed57280fca05b7fd31396d1893bd08,1447,Lassa mammarenavirus,Human delay - symptom onset>admission to care,11,0,Days,NA,NA,Mean,3.5,Standard deviation (Sd),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,6,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+f14b287ccc8da2a837c4d9d3ae2b3394,7ade8c296638c71085d19a881c9467fa,1447,Lassa mammarenavirus,Human delay - symptom onset>admission to care,6,0,Days,NA,NA,Mean,2.6,Standard deviation (Sd),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,14,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+f14b287ccc8da2a837c4d9d3ae2b3394,5ee96a93bd9b60883b84c0fc8aeee565,1447,Lassa mammarenavirus,Human delay - admission to care>death,7,0,Days,NA,NA,Median,NA,NA,0,12,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,6,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+f14b287ccc8da2a837c4d9d3ae2b3394,3e3bb3aab04d501da68df2039b5eb915,1447,Lassa mammarenavirus,Human delay - admission to care>discharge/recovery,10,0,Days,NA,NA,Median,NA,NA,5,36,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,14,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+f14b287ccc8da2a837c4d9d3ae2b3394,f42ce74fbac514d93a342303e1735670,1447,Lassa mammarenavirus,Human delay - incubation period,10,0,Days,NA,NA,Mean,NA,NA,5,18,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,12,47,20,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+f14b287ccc8da2a837c4d9d3ae2b3394,9d7cf787520bd986413cf41ab71e3bc7,1447,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Unspecified,Both,Hospital based,Persons under investigation,12,47,20,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+f14b287ccc8da2a837c4d9d3ae2b3394,c810c45023486f074bfdb3206d16123e,1447,Lassa mammarenavirus,Human delay - other human delay (go to section),8.2,0,Days,NA,NA,Mean,3.8,Standard deviation (Sd),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,14,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,Admission to Care/Hospitalisation,Symptom Resolution,FALSE,FALSE,NA,Human delay
+f14b287ccc8da2a837c4d9d3ae2b3394,0425e269d540b537cc065319e23d8519,1447,Lassa mammarenavirus,Severity - case fatality rate (CFR),30,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,6,20,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,Other,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,12,47,20,Nigeria,Ebonyi State,1,Jan 01,2012,25,Mar 03,2012,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+1ce071593b7e4f70be654803280e7dcc,807509bdfd78a309a72a9ef620366b5e,2008,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,741,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Mixed groups,NA,NA,741,Kenya,Western Kenya,NA,Mar 03,1980,NA,Dec 12,1981,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+3de52119e82fafaa413c61632e4d9dfa,db88920bf0579cde5cd8a8d6e700b60b,2114,Lassa mammarenavirus,Seroprevalence - Unspecified,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,159,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Post outbreak,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Contact based,Mixed groups,NA,NA,159,United Kingdom,St Thomas's Hospital; London,NA,NA,1982,NA,NA,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+cf8d3b6b0848dc23782fe6d3ca607428,2b1158f68ccb8cf7ece83db660bba16d,2133,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,Percentage (%),0.9,14.1,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Other;Region;Sex;Time,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Community based,General population,NA,NA,NA,Liberia,Lofa County; Montserrado County,NA,Sep 09,1980,NA,Jan 01,1982,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+a7e1052e2dc0d9b8c39ada25b3149e5c,1411bcb3c337c61fb9e65fa4d23ed77c,2151,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Infection,Household contact,NA,Significant,Unspecified,Unspecified,Community based,Mixed groups,NA,NA,NA,Nigeria,Lassa,3,Mar,1971,NA,Mar,1971,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a7e1052e2dc0d9b8c39ada25b3149e5c,cdc6c15af03a0501f206712e27fa7825,2151,Lassa mammarenavirus,Seroprevalence - PRNT,5.8,0,Percentage (%),0,9.3,Unspecified,NA,NA,NA,NA,NA,25,434,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Occupation;Region;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Mixed groups,NA,NA,434,Nigeria,Lassa,24,Aug,1970,24,Aug,1970,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+a7e1052e2dc0d9b8c39ada25b3149e5c,4875c8c9cf0ff15a73d7b0b53f05c5d6,2151,Lassa mammarenavirus,Seroprevalence - PRNT,5.4,0,Percentage (%),0,23.5,Unspecified,NA,NA,NA,NA,NA,18,336,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Occupation;Region;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Mixed groups,NA,NA,336,Nigeria,Lassa,3,Mar,1971,NA,Mar,1971,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+15f909e56698385bcf1614c2d82d5a66,46b47b36b6312e6df12a9cf71cb7646a,2254,Lassa mammarenavirus,Seroprevalence - Unspecified,7,0,Percentage (%),3.2,16.3,Unspecified,NA,NA,NA,NA,NA,12,170,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Mixed settings,Mixed groups,NA,NA,170,Sierra Leone,Panguma; Tongo; Serabu,NA,Nov,1974,NA,Nov,1974,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c4780652cbeae3493b6a0aab6281698e,6b18609c6f7a889015675b75f76cc6a4,2293,Lassa mammarenavirus,Seroprevalence - IgG,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,200,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Other,NA,NA,200,Germany,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c4780652cbeae3493b6a0aab6281698e,4c18a289ffef3edd815aed316149c451,2293,Lassa mammarenavirus,Seroprevalence - IgG,4,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,430,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,430,Ghana,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c4780652cbeae3493b6a0aab6281698e,5847837e8fd799c746b22300c02160c4,2293,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,100,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Other,NA,NA,100,Germany,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c4780652cbeae3493b6a0aab6281698e,e2684bccf67ebeab0dc688d3b9182c20,2293,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,100,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,100,Guinea,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+c4780652cbeae3493b6a0aab6281698e,489b67dd09d6ea6a93ada8911a038317,2293,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,0,200,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,200,Ghana,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+97c95e21d7cbccd877ea64a639fa1457,399f70f6731a6c99ac6f7d8a3af789cc,2293,Lassa mammarenavirus,Seroprevalence - IgG,18.8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,40,213,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,213,Guinea,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+97c95e21d7cbccd877ea64a639fa1457,285f17866e818086a335d7134a7105f2,2293,Lassa mammarenavirus,Seroprevalence - IgG,3,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,13,430,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Unspecified,Unspecified,NA,NA,430,Ghana,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+058191215dbb0ec7e5e8c5c9f86f6181,ca8377aa4a7c467ee306e86b3a8687d2,2567,Lassa mammarenavirus,Severity - case fatality rate (CFR),18.5,0,Percentage (%),14.9,66.7,Unspecified,NA,NA,NA,NA,NA,516,2787,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,Region;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,2787,Nigeria,NA,NA,Dec 12,2016,NA,Sep 09,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+058191215dbb0ec7e5e8c5c9f86f6181,83d1cc11f5cd7427b7663e8d365c8e56,2567,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,Infection,Other,NA,Significant,Unspecified,Unspecified,Hospital based,Persons under investigation,NA,NA,2787,Nigeria,NA,NA,Dec 12,2016,NA,Sep 09,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+c11447f7b8b2ca38bea13de8e8494d6d,6dc80730bc7cc7ac2775cf7829eb18f0,2579,Lassa mammarenavirus,Severity - case fatality rate (CFR),54,0,Percentage (%),33.3,66.6,Unspecified,NA,NA,NA,NA,NA,41,76,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Age;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,15,64,76,Nigeria,Bauchi State,NA,Jan 01,2015,NA,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+c11447f7b8b2ca38bea13de8e8494d6d,52936665b65bdae2e49fe24b949d6878,2579,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Other;Sex,NA,Not significant,Adjusted,Both,Hospital based,Persons under investigation,15,64,76,Nigeria,Bauchi State,NA,Jan 01,2015,NA,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+c11447f7b8b2ca38bea13de8e8494d6d,dcf9ace92e5041d03da8fb3ad867f046,2579,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Adjusted,Both,Hospital based,Persons under investigation,15,64,76,Nigeria,Bauchi State,NA,Jan 01,2015,NA,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+3e23fca0ea0c6a79430d87644ca0cb5d,8369b0468bd84d3864fc016d9982a1be,2585,Lassa mammarenavirus,Severity - case fatality rate (CFR),17.4,0,Percentage (%),0,100,Unspecified,NA,NA,NA,NA,NA,550,3162,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,Age;Occupation;Region;Sex;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,3162,Nigeria,NA,NA,Jan 01,2018,NA,Dec 12,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+3e23fca0ea0c6a79430d87644ca0cb5d,5497532a7a484510ea397a139a106a96,2585,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Sex,NA,Unspecified,Unspecified,Both,Hospital based,Persons under investigation,NA,NA,3162,Nigeria,NA,NA,Jan 01,2018,NA,Dec 12,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+3e23fca0ea0c6a79430d87644ca0cb5d,1c79665ce962ae2d6af6d8b2aa868fe7,2585,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Occupation,Livestock and animal herders;Other,Unspecified,Unspecified,Both,Hospital based,Persons under investigation,NA,NA,3162,Nigeria,NA,NA,Jan 01,2018,NA,Dec 12,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+8321fdc6e9cc33f09d4f4c0e58c71c08,247859c3b0425838a6f636c3b7099a66,2589,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,423,Nigeria,NA,1,Jan 01,2018,6,May 05,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+8321fdc6e9cc33f09d4f4c0e58c71c08,e23187cc02a444d39ecbf8edd29f4697,2589,Lassa mammarenavirus,Severity - case fatality rate (CFR),25.1,0,Percentage (%),NA,NA,Unspecified,NA,NA,20.9,29.2,CI95%,106,423,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,423,Nigeria,NA,1,Jan 01,2018,6,May 05,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+8321fdc6e9cc33f09d4f4c0e58c71c08,559c18a70f1c43313ef62dce93eafc28,2589,Lassa mammarenavirus,Attack rate,0.56,0,Percentage (%),NA,NA,Unspecified,NA,NA,0.35,0.77,CI95%,28,5001,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Contact based,Persons under investigation,NA,NA,5001,Nigeria,NA,1,Jan 01,2018,6,May 05,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Attack rate
+8321fdc6e9cc33f09d4f4c0e58c71c08,995fb9ef59194315374a5c3f115384bf,2589,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation,Healthcare,Significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,423,Nigeria,NA,1,Jan 01,2018,6,May 05,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+8321fdc6e9cc33f09d4f4c0e58c71c08,bc4cd80f47f713a6da178b2be03c7865,2589,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Contact with animal;Funeral;Sex,NA,Not significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,423,Nigeria,NA,1,Jan 01,2018,6,May 05,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+cca326850cece52b6cb448ff5e6d2df2,af803f44e9ef5529b03e1b8842d482fd,2590,Lassa mammarenavirus,Mutations – substitution rate,7.8,-4,Substitutions/site/year,NA,NA,Unspecified,NA,NA,5.4,10.2,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,NA,NA,NA,NA,219,Nigeria,NA,NA,NA,1969,NA,NA,2018,L segment,FALSE,NA,NA,FALSE,FALSE,NA,Mutations
+cca326850cece52b6cb448ff5e6d2df2,3c7090e84b624004cba05118adc7eafe,2590,Lassa mammarenavirus,Mutations – substitution rate,7.8,-4,Substitutions/site/year,NA,NA,Unspecified,NA,NA,6.3,9.1,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,NA,NA,NA,NA,219,Nigeria,NA,NA,NA,1969,NA,NA,2018,S segment,FALSE,NA,NA,FALSE,FALSE,NA,Mutations
+43894c4c1afe197d6fdb6b9a031ea65d,da91db773426c7ab08489b3265e3ca17,2610,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,Percentage (%),33,48,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Contact based,Persons under investigation,NA,NA,50,Nigeria,Abakaliki; Owo,NA,Oct 10,2018,NA,Oct 10,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+43894c4c1afe197d6fdb6b9a031ea65d,216bc2400f20b9803ea4acfc141ea480,2610,Lassa mammarenavirus,Seroprevalence - IgG,NA,0,Percentage (%),50,64,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Contact based,Persons under investigation,NA,NA,50,Nigeria,Abakaliki; Owo,NA,Oct 10,2018,NA,Oct 10,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+43894c4c1afe197d6fdb6b9a031ea65d,6345223d205935a61e76e5086847c7ae,2610,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,Percentage (%),23,32,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Hospital based,Other,NA,NA,92,Nigeria,Abakaliki; Owo,NA,Oct 10,2018,NA,Oct 10,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+43894c4c1afe197d6fdb6b9a031ea65d,a9e213e7133031b3d3fc5dd04e78ca37,2610,Lassa mammarenavirus,Seroprevalence - IgG,NA,0,Percentage (%),48,77,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Hospital based,Other,NA,NA,92,Nigeria,Abakaliki; Owo,NA,Oct 10,2018,NA,Oct 10,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+8dcd9631796bbe52a7ae56ac6da2807a,3578bba71daf1a7e3e11a73efcfdfb2f,2611,Lassa mammarenavirus,Severity - case fatality rate (CFR),60,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,3,5,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,5,Sierra Leone,Tonkolili,30,Oct 10,2019,16,Nov 11,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+c6cead4f4e9802343ccbb00449f22471,77d504ab43c35ef7a218373ff721f74d,2617,Lassa mammarenavirus,Severity - case fatality rate (CFR),4.9,0,Percentage (%),NA,NA,Unspecified,NA,NA,0,5.4,CRI95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,NA,NA,NA,2016,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+c6cead4f4e9802343ccbb00449f22471,e93361e40a2f1a00c337a420be54deb2,2617,Lassa mammarenavirus,Human delay - incubation period,12.8,0,Days,NA,NA,Mean,NA,NA,NA,NA,NA,NA,NA,Gamma,12.8,Mean,TRUE,4.6,Standard deviation,TRUE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,NA,NA,NA,2016,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+c6cead4f4e9802343ccbb00449f22471,9163b724d10bf15e025fdf7428f80a2d,2617,Lassa mammarenavirus,Human delay - symptom onset>death,13.8,0,Days,NA,NA,Mean,NA,NA,NA,NA,NA,NA,NA,Gamma,13.8,Mean,TRUE,7.6,Standard deviation,TRUE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Nigeria,NA,NA,NA,2016,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+81e0d91fa1fda5d6b4fc8478d686227b,c8687594212300d6a05a24ee2a14ed5b,2627,Lassa mammarenavirus,"Reproduction number (Effective, Re)",NA,0,No units,1.05,1.62,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,Growth rate,Method;Other;Region;Time,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Population based,General population,NA,NA,NA,Nigeria,Edo; Ondo; Ebonyi; Bauchi; Plateau,NA,Jan 01,2016,NA,Mar 03,2019,NA,FALSE,NA,NA,FALSE,FALSE,Other,Reproduction number
+81e0d91fa1fda5d6b4fc8478d686227b,fab0542b14773f1d60fdaf733ce53a85,2627,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Reproduction Number,Other,NA,Significant,Not adjusted,Unspecified,Population based,General population,NA,NA,NA,Nigeria,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+532468d64e49c8b696cc09f1530f068e,7564aa08f288e501c40a95f352209863,2636,Lassa mammarenavirus,Severity - case fatality rate (CFR),67.3,0,Percentage (%),42.4,89.5,Unspecified,NA,NA,NA,NA,NA,165,245,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,Method;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,245,Sierra Leone,Kenema District,NA,NA,2008,NA,NA,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+532468d64e49c8b696cc09f1530f068e,934d0ae625da545cff1f6dca4cd58c91,2636,Lassa mammarenavirus,Seroprevalence - IgM,NA,0,Percentage (%),18,22,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Disease generation;Time,TRUE,TRUE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema District,NA,NA,2008,NA,NA,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+fe31c2bab7161c6baa662418319ead9d,2e034d6ade726d7281aa3a31c34746b3,2648,Lassa mammarenavirus,Seroprevalence - IgG,5.2,0,Percentage (%),NA,NA,Unspecified,NA,NA,3.6,7.2,CI95%,34,657,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Other;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,18,98,657,Ghana,Ankaakur; Ehiawenwu; Amomaso; Menkwo; Mangoase; Jirandogo; Bowena; Natorduori; Teanoba; Doniga Naveransa,NA,Aug 08,2010,NA,Aug 08,2011,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+e2d105ecdca74084b6c652802b2c4516,208990d112f5dd1a57a8a1efc0d275f9,2651,Lassa mammarenavirus,Severity - case fatality rate (CFR),44,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,8,18,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,Adjusted,NA,Other,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,0,60,18,Benin,Borgou; Donga;Collines; Alibori; Plateau; Ouémé; Atlantique; Litoral,NA,Dec 12,2015,NA,Mar 03,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+e2d105ecdca74084b6c652802b2c4516,d8a2c5bac7e869b0a89eeedb4f40b6c7,2651,Lassa mammarenavirus,Human delay - other human delay (go to section),7,0,Days,NA,NA,Median,NA,NA,0,19,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,NA,NA,Other,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,0,60,21,Benin,Borgou; Donga;Collines; Alibori; Plateau; Ouémé; Atlantique; Litoral,NA,Dec 12,2015,NA,Mar 03,2016,NA,FALSE,Symptom Onset/Fever,Other: Sample collection/Diagnosis,FALSE,FALSE,NA,Human delay
+cd9b32efb7bbbda5e5eab1ef5633d65e,90e014b440ca69c3717a169e75928af5,2655,Lassa mammarenavirus,Mutations – substitution rate,8.4,-4,Substitutions/site/year,NA,NA,Unspecified,NA,NA,7.6,9.2,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,L segment,TRUE,NA,NA,FALSE,FALSE,NA,Mutations
+cd9b32efb7bbbda5e5eab1ef5633d65e,c6c2b0714cfc0bee8d55cc80f8747e66,2655,Lassa mammarenavirus,Mutations – substitution rate,8.2,-4,Substitutions/site/year,NA,NA,Unspecified,NA,NA,7.2,9.1,Highest Posterior Density Interval 95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,S segment,TRUE,NA,NA,FALSE,FALSE,NA,Mutations
+75db31dff518f73287bdd16002c2b20a,5f1f31d779e18e5e6d7c74cf0ad0f4e1,2656,Lassa mammarenavirus,Severity - case fatality rate (CFR),31.6,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,5,16,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Start outbreak,Adjusted,NA,Occupation;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Healthcare workers,20,51,16,Nigeria,NA,28,Dec 12,2017,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+fea58fe658cf60d81e608b049bed7189,9beeb0310187609eacca779da5fef655,2661,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,FALSE,Occurrence,Other,NA,Significant,Adjusted,Both,Population based,General population,NA,NA,3096,Nigeria,NA,NA,NA,2016,NA,NA,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+fea58fe658cf60d81e608b049bed7189,4be42c3941820927f211174e655f9358,2661,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,FALSE,Incidence,Other,NA,Significant,Adjusted,Both,Population based,General population,NA,NA,3096,Nigeria,NA,NA,NA,2016,NA,NA,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+7bdcd06d2e491ddfda97a3c826c2e554,890ebad92b33000bb0f2ad92e543c6d1,2662,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Other,NA,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+7bdcd06d2e491ddfda97a3c826c2e554,b9d3acf2905719fde592eef22d926676,2662,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Sex,NA,Not significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+7bdcd06d2e491ddfda97a3c826c2e554,1d9bea33d93d3e6e354a0802c0f92819,2662,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Other,NA,Significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+7bdcd06d2e491ddfda97a3c826c2e554,b6cf6e827b30936d55ef851f08cb88c5,2662,Lassa mammarenavirus,Human delay - symptom onset>admission to care,8,0,Days,NA,NA,Median,NA,NA,7,13,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+7bdcd06d2e491ddfda97a3c826c2e554,67cae73140a86170c5c5e49366ed3450,2662,Lassa mammarenavirus,Human delay - other human delay (go to section),8,0,Days,NA,NA,Median,NA,NA,7,13,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,Symptom Onset/Fever,Other: Start of ribavirin treatment,FALSE,FALSE,NA,Human delay
+7bdcd06d2e491ddfda97a3c826c2e554,68641e739e57a9d1d51c1965f1d84dcb,2662,Lassa mammarenavirus,Human delay - other human delay (go to section),10,0,Days,NA,NA,Median,NA,NA,9,13,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,Other: Start of ribavirin treatment,Other: End of ribavirin treatment,FALSE,FALSE,NA,Human delay
+7bdcd06d2e491ddfda97a3c826c2e554,30981e8b321217c58f66c960ecebb8e7,2662,Lassa mammarenavirus,Human delay - admission to care>death,3,0,Days,NA,NA,Median,NA,NA,1,6,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,61,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+7bdcd06d2e491ddfda97a3c826c2e554,97303906dc052d466c446ecd32868d65,2662,Lassa mammarenavirus,Human delay - admission to care>discharge/recovery,11,0,Days,NA,NA,Median,NA,NA,10,15,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,449,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+7bdcd06d2e491ddfda97a3c826c2e554,eafc45da31c9f375a698a68a9aef3681,2662,Lassa mammarenavirus,Human delay - other human delay (go to section),3,0,Days,NA,NA,Median,NA,NA,2,7,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,92,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,Other: Start of oxygen therapy,Other: End of oxygen therapy,FALSE,FALSE,NA,Human delay
+7bdcd06d2e491ddfda97a3c826c2e554,b201eb2ee02f33a8682c9b735b5a9b20,2662,Lassa mammarenavirus,Human delay - other human delay (go to section),8,0,Days,NA,NA,Median,NA,NA,7,10,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,459,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,Other: Start of antibacterial therapy,Other: End of antibacterial therapy,FALSE,FALSE,NA,Human delay
+7bdcd06d2e491ddfda97a3c826c2e554,18adabc0b76f80b8980e3c64a0442247,2662,Lassa mammarenavirus,Severity - case fatality rate (CFR),12,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,62,510,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,Age;Other;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+7bdcd06d2e491ddfda97a3c826c2e554,3c98741da22f5aa7898b1328fb44e371,2662,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Cormobidity;Other;Sex,NA,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,510,Nigeria,Ondo State,5,Apr 04,2018,15,Mar 03,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+21548ccbe5faf964d154435aaf356f1a,a58d7b79e688d58bb0e1130f0a421954,2676,Lassa mammarenavirus,Seroprevalence - Unspecified,36.1,0,Percentage (%),9.1,58.7,Unspecified,NA,NA,NA,NA,NA,84,233,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Level of exposure;Occupation;Other;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Mixed settings,Mixed groups,NA,NA,233,Nigeria,Owo And Ose Lgas,NA,Mar 03,2018,NA,Apr 04,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+21548ccbe5faf964d154435aaf356f1a,a45434fffd3c38077c1130a1134f6ea2,2676,Lassa mammarenavirus,Seroprevalence - IgM,8.6,0,Percentage (%),1.9,63.6,Unspecified,NA,NA,NA,NA,NA,20,233,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Level of exposure;Occupation;Other;Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Mixed settings,Mixed groups,NA,NA,233,Nigeria,Owo And Ose Lgas,NA,Mar 03,2018,NA,Apr 04,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+21548ccbe5faf964d154435aaf356f1a,603f31b71b8dcf510672e6d2cb1e84af,2676,Lassa mammarenavirus,Seroprevalence - IgM,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,12,Nigeria,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+21548ccbe5faf964d154435aaf356f1a,d3e76b01421bbd2414bf93036487d170,2676,Lassa mammarenavirus,Seroprevalence - IgG,0,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,0,12,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Other,NA,NA,12,Nigeria,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+e28ce3a50b0b0cf4cf89ddb9ade0dbb3,0af7e6a5e4a0297c1cfe55a41c8d0eca,2679,Lassa mammarenavirus,Seroprevalence - Unspecified,81.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,58,71,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Unspecified,Other,NA,NA,71,Sierra Leone,Kenema District,3,Jun 06,2019,28,Sep 09,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+e28ce3a50b0b0cf4cf89ddb9ade0dbb3,b09a57c572cf4f612d341cc0fdb70aec,2679,Lassa mammarenavirus,Seroprevalence - Unspecified,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,12,72,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,School based,General population,NA,NA,72,Sierra Leone,Freetown,20,May 05,2019,24,May 05,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+e28ce3a50b0b0cf4cf89ddb9ade0dbb3,328adcef045f7467f7607c3a104edfad,2679,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Other,NA,Significant,Not adjusted,Both,Unspecified,Other,NA,NA,71,Sierra Leone,Kenema District,3,Jun 06,2019,28,Sep 09,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+e28ce3a50b0b0cf4cf89ddb9ade0dbb3,659a82b953dfb46fb7c932c6858d87d9,2679,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Household contact;Other,NA,Significant,Adjusted,Both,School based,General population,NA,NA,72,Sierra Leone,Freetown,20,May 05,2019,24,May 05,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+e28ce3a50b0b0cf4cf89ddb9ade0dbb3,6179b91ed196ad4b9db1b2ef54da4e24,2679,Lassa mammarenavirus,Human delay - symptom onset>admission to care,7,0,Days,NA,NA,Median,NA,NA,5,9,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Other,NA,NA,71,Sierra Leone,Kenema District,3,Jun 06,2019,28,Sep 09,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+07694750cc400f44b0436ff8e375038a,555cb44c2e59aec5403d8653752e52ea,2684,Lassa mammarenavirus,Human delay - symptom onset>admission to care,7.5,0,Days,NA,NA,Mean,4.9,Standard deviation (Sd),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,103,Liberia,NA,NA,Jan 01,2019,NA,Dec 12,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+07694750cc400f44b0436ff8e375038a,13b7fe964d3b026989aeb63b32c03dc6,2684,Lassa mammarenavirus,Severity - case fatality rate (CFR),39.8,0,Percentage (%),34.6,45.1,Unspecified,NA,NA,NA,NA,NA,41,103,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,103,Liberia,NA,NA,Jan 01,2019,NA,Dec 12,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+07694750cc400f44b0436ff8e375038a,1d3e997359428315705ab249030d16dc,2684,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Other,NA,Significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,103,Liberia,NA,NA,Jan 01,2019,NA,Dec 12,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+07694750cc400f44b0436ff8e375038a,386e1882d3472ea17e056e2ad23b3e71,2684,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Occupation;Sex,Healthcare,Not significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,103,Liberia,NA,NA,Jan 01,2019,NA,Dec 12,2020,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+fa80c03c7655ca696b13c7da0205ddc1,d5cb70e7dbcd91eac85446b5c19b7b33,2707,Lassa mammarenavirus,Growth rate (r),0.51,0,Per day,NA,NA,Unspecified,NA,NA,0.17,1.06,CI95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,31,Oct 10,2016,23,Jan 01,2017,NA,FALSE,NA,NA,FALSE,FALSE,NA,Growth rate
+fa80c03c7655ca696b13c7da0205ddc1,fe0c0947c407d073517f941cb9b81434,2707,Lassa mammarenavirus,Growth rate (r),0.43,0,Per day,NA,NA,Unspecified,NA,NA,0.23,0.72,CI95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,30,Oct 10,2017,22,Jan 01,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Growth rate
+fa80c03c7655ca696b13c7da0205ddc1,000305db95d9f23c7ed8ea6a87b5793c,2707,Lassa mammarenavirus,Growth rate (r),0.32,0,Per day,NA,NA,Unspecified,NA,NA,0.23,0.64,CI95%,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,29,Oct 10,2018,21,Jan 01,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Growth rate
+35894e78644b1162bc677f5b19a9c2a3,9b88054a7375803ff25c98e26f8cc7c0,2714,Lassa mammarenavirus,Severity - case fatality rate (CFR),36.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,11,30,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,16,39,30,Nigeria,Irrua,NA,NA,2009,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+35894e78644b1162bc677f5b19a9c2a3,1e5ebccf5c14d50da782c1ae877da91d,2714,Lassa mammarenavirus,Human delay - symptom onset>admission to care,6,0,Days,NA,NA,Mean,3.1,Standard deviation (Sd),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Other,16,39,19,Nigeria,Irrua,NA,NA,2009,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+35894e78644b1162bc677f5b19a9c2a3,2611d787fe5494da881a859dad7740db,2714,Lassa mammarenavirus,Human delay - symptom onset>admission to care,10,0,Days,NA,NA,Mean,3.5,Standard deviation (Sd),NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Other,24,37,11,Nigeria,Irrua,NA,NA,2009,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+a1343eeb54acbd2cbcdc42a4b1415df2,b66694031d1034e8055d81df2f3a3949,2739,Lassa mammarenavirus,Seroprevalence - IgG,49.6,0,Percentage (%),NA,NA,Unspecified,NA,NA,43.3,55.9,CI95%,119,240,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Other;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,20,46,240,Nigeria,Irrua,NA,Feb 02,2019,NA,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+a1343eeb54acbd2cbcdc42a4b1415df2,89b6da927b8ccba4ed9a27965218d7ab,2739,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Contact with animal;Other,NA,Significant,Adjusted,Female,Hospital based,Pregnant women,20,46,240,Nigeria,Irrua,NA,Feb 02,2019,NA,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a1343eeb54acbd2cbcdc42a4b1415df2,f7e58308cae6d393f4452bac1be9157d,2739,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Other,NA,Not significant,Adjusted,Female,Hospital based,Pregnant women,20,46,240,Nigeria,Irrua,NA,Feb 02,2019,NA,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+3bae49c8b337eb4110a380e79470c484,bc2b270cd3f306f420e39bb059d991dd,2759,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Sex,NA,Not significant,Adjusted,Both,Community based,Other,6,99,702,Guinea,Basse-Guinee,NA,NA,2016,NA,NA,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+3bae49c8b337eb4110a380e79470c484,5ba06cd360b892dae07accae20c9fd56,2759,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Sex,NA,Not significant,Adjusted,Both,Community based,Mixed groups,17,90,584,Guinea,Guniee Forestiere,NA,NA,2017,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+3bae49c8b337eb4110a380e79470c484,294e0d6e2cfdcb7edc0728784dec3451,2759,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Other,NA,Significant,Adjusted,Both,Community based,Mixed groups,17,90,584,Guinea,Guniee Forestiere,NA,NA,2017,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+3bae49c8b337eb4110a380e79470c484,b20e444011a978094bb5b4294d7c568d,2759,Lassa mammarenavirus,Seroprevalence - IgG,11.9,0,Percentage (%),0,20,Mean,NA,NA,9.7,14.5,CI95%,84,702,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Other,6,99,702,Guinea,Basse-Guinee,NA,NA,2016,NA,NA,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+3bae49c8b337eb4110a380e79470c484,e758d9c3fdc6657dc6f6bf649daa99d8,2759,Lassa mammarenavirus,Seroprevalence - IgG,59.6,0,Percentage (%),16.9,86.84,Mean,NA,NA,55.5,63.5,CI95%,348,584,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,Mixed groups,17,90,584,Guinea,Guniee Forestiere,NA,NA,2017,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+3bae49c8b337eb4110a380e79470c484,b69bcb512712ee27cb398968f2680aab,2759,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Other,NA,Significant,Adjusted,Both,Community based,Other,6,99,702,Guinea,Basse-Guinee,NA,NA,2016,NA,NA,2016,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+664625d3b41c6769054152af5f535eac,e331195b041bbc439fcf80f6accf8249,2760,Lassa mammarenavirus,Severity - case fatality rate (CFR),29.9,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,20,67,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,69,Nigeria,Ebonyi State,NA,Dec 12,2017,NA,Apr 04,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+664625d3b41c6769054152af5f535eac,465aa6fc4718942c6bdcd9c52a59b0a7,2760,Lassa mammarenavirus,Severity - case fatality rate (CFR),85.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,12,14,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,14,Nigeria,Ebonyi State,NA,Aug 08,2018,NA,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+664625d3b41c6769054152af5f535eac,9adb5d4227a2843848608078a7364277,2760,Lassa mammarenavirus,Human delay - symptom onset>admission to care,7,0,Days,7,12,Median,NA,NA,4,13,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,67,Nigeria,Ebonyi State,NA,Dec 12,2017,NA,Apr 04,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+664625d3b41c6769054152af5f535eac,2e690ae51215885d06009d1f662a064f,2760,Lassa mammarenavirus,Human delay - symptom onset>admission to care,10,0,Days,8,14,Median,NA,NA,7,12,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Method,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,9,Nigeria,Ebonyi State,NA,Aug 08,2018,NA,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+664625d3b41c6769054152af5f535eac,1de6d98f1a99b0459703d065cc4ade93,2760,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Sex,NA,Not significant,Unspecified,Both,Hospital based,Persons under investigation,NA,NA,83,Nigeria,Ebonyi State,NA,Dec 12,2017,NA,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+664625d3b41c6769054152af5f535eac,8ba5c308cabc2457d257a25504f52d03,2760,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,83,Nigeria,Ebonyi State,NA,Dec 12,2017,NA,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+d18376f8fbdaee1397fe7ced51d31ea1,fd619cba03313426e2b40e4d384c8328,2772,Lassa mammarenavirus,Seroprevalence - IgG,20.12,0,Percentage (%),0,83.25,Unspecified,NA,NA,NA,NA,NA,1040,5168,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,General population,NA,NA,5168,Sierra Leone,Kenema,NA,Jul 07,2015,NA,Jun 06,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+d18376f8fbdaee1397fe7ced51d31ea1,b34a9868646ea4825017031b7e676a58,2772,Lassa mammarenavirus,Seroprevalence - IgG,10.61,0,Percentage (%),0,88.33,Unspecified,NA,NA,NA,NA,NA,339,3196,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,NA,NA,3196,Sierra Leone,Tonkolili,NA,Jul 07,2015,NA,Jun 06,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+d18376f8fbdaee1397fe7ced51d31ea1,46fb49d68359692194b6e390b3900286,2772,Lassa mammarenavirus,Seroprevalence - IgG,14.14,0,Percentage (%),0,74.39,Unspecified,NA,NA,NA,NA,NA,322,2278,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Community based,General population,NA,NA,2278,Sierra Leone,Port Loko,NA,Jul 07,2015,NA,Jun 06,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+1eceb275acb47156e71a4a3756170a85,dfc50b9f0ce164b946e99ccb5b286de5,2818,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,201,Nigeria,Irrua,NA,Jan 01,2014,NA,Apr 04,2017,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+1eceb275acb47156e71a4a3756170a85,7bad3ad38c9214635f3a39a17ff03bd9,2818,Lassa mammarenavirus,Severity - case fatality rate (CFR),37.6,0,Percentage (%),24,37.6,Unspecified,NA,NA,NA,NA,NA,115,306,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Other,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,306,Nigeria,Irrua,NA,Jan 01,2014,NA,Apr 04,2017,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+ccda4092e544004da9459be04bf86efd,f381357260417affa15cb8e3fcd017ce,2826,Lassa mammarenavirus,Seroprevalence - IgG,45.7,0,Percentage (%),NA,NA,Unspecified,NA,NA,38.4,53.1,CI95%,77,170,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Female,Hospital based,Pregnant women,20,46,170,Nigeria,Edo State,12,Feb 02,2019,20,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+61b4127c65419fb48e0e81c450164f2b,f57e999f2dd22535167d6a02f2992481,3147,Lassa mammarenavirus,Severity - case fatality rate (CFR),28,0,Percentage (%),3.5,82,Unspecified,NA,NA,NA,NA,NA,16,57,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Age;Disease generation;Symptoms,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Children,0,15,57,Nigeria,Irrua,NA,Jan 01,2009,NA,Aug 08,2017,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+61b4127c65419fb48e0e81c450164f2b,d2f7690858ec59f237d126e15a4235e1,3147,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Unspecified,Both,Hospital based,Children,0,15,57,Nigeria,Irrua,NA,Jan 01,2009,NA,Aug 08,2017,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+bc6c495396faeb6c5a51918f9c5c3611,1c3222ae1dab826ff4dce32191862c16,3153,Lassa mammarenavirus,Human delay - symptom onset>admission to care,6,0,Days,3,10,Median,NA,NA,4,10,Inter Quartile Range (IQR),NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Disease generation;Occupation;Other;Region;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,389,Nigeria,Edo; Ondo; Cross River; Nasarawa,NA,Dec 12,2018,NA,Apr 04,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+bc6c495396faeb6c5a51918f9c5c3611,c53ee241e0be5b548c15b09adf5a8f80,3153,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Onset-Admission Delay,Age;Close contact;Funeral;Household contact;Non-household contact;Occupation;Other;Sex,Healthcare;Other;Public Transport,Not significant,Not adjusted,Unspecified,Population based,Persons under investigation,NA,NA,389,Nigeria,Edo; Ondo; Cross River; Nasarawa,NA,Dec 12,2018,NA,Apr 04,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a554804f0a1473afc8a019fb476a8cc7,20b53ddac6434dd9ff17ce9c84568b64,3215,Lassa mammarenavirus,Severity - case fatality rate (CFR),37.2,0,Percentage (%),14.3,71.4,Unspecified,NA,NA,NA,NA,NA,42,113,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Age;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,113,Nigeria,Ebonyi,1,Jan 01,2018,31,Mar 03,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+ad8ffa9639307cf82fb48df77b54cbd6,cc54edc987e3166514d17bfb84c8b6db,3258,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation;Other;Sex,Education;Healthcare;Livestock and animal herders;Other,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,20027,Nigeria,NA,NA,NA,2018,NA,NA,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+ad8ffa9639307cf82fb48df77b54cbd6,385021ca15c2e3068bc9d4c17b292126,3258,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation;Other,Education;Healthcare;Other,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,20027,Nigeria,NA,NA,NA,2018,NA,NA,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+ad8ffa9639307cf82fb48df77b54cbd6,1411cdd7d494f974404d231c3bdefea8,3258,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation;Other;Sex,Education;Healthcare;Livestock and animal herders;Other,Significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,20027,Nigeria,NA,NA,NA,2018,NA,NA,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+ad8ffa9639307cf82fb48df77b54cbd6,5571a2cc77291ec831cb09d72fe9cf59,3258,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation;Other,Other,Not significant,Adjusted,Both,Hospital based,Persons under investigation,NA,NA,20027,Nigeria,NA,NA,NA,2018,NA,NA,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+0ca3ba0c5d6b0e45f977bc47656c73f3,30cf35d2c3cb76320aea30137eba05d4,3395,Lassa mammarenavirus,Seroprevalence - IFA,0,0,Percentage (%),0,0,Unspecified,NA,NA,NA,NA,NA,0,486,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Region,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,School based,Children,8,10,486,Zimbabwe,Omay; Ndowoyo; Maranke; Cbiweshe,NA,NA,1980,NA,NA,1980,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+701e666ecf9e42a9d9e8d84ca4043528,56c0b1bd91e365fd959932e4db2a7dce,3530,Lassa mammarenavirus,Seroprevalence - IgG,33.2,0,Percentage (%),21.6,44,Unspecified,NA,NA,NA,NA,NA,682,2051,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Other;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,2051,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+701e666ecf9e42a9d9e8d84ca4043528,b7c96597deb9874cd991df9733413a90,3530,Lassa mammarenavirus,Seroprevalence - IgM,25.6,0,Percentage (%),16.5,36.4,Unspecified,NA,NA,NA,NA,NA,838,3277,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Other;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,3277,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+701e666ecf9e42a9d9e8d84ca4043528,e21c42a1fd89e64e64ef28d0f2e3b46f,3530,Lassa mammarenavirus,Severity - case fatality rate (CFR),78.5,0,Percentage (%),31,100,Unspecified,NA,NA,NA,NA,NA,106,135,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,Other;Time,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,NA,NA,135,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+701e666ecf9e42a9d9e8d84ca4043528,71778e267484a69b8326715b2c8f3774,3530,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,TRUE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Age;Hospitalisation;Other,NA,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+701e666ecf9e42a9d9e8d84ca4043528,6e318269be2a5899635410143c967679,3530,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,TRUE,Endemic,NA,NA,NA,FALSE,FALSE,Serology,Other;Sex,NA,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+701e666ecf9e42a9d9e8d84ca4043528,ef0f007f582108efe077540d348f7660,3530,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,TRUE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+701e666ecf9e42a9d9e8d84ca4043528,3af46f7414ecfb211c8464161245aea3,3530,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,TRUE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Hospitalisation;Other;Sex,NA,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+701e666ecf9e42a9d9e8d84ca4043528,612f1e747c9a8d7f9fd67fd51295a0d4,3530,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Hospitalisation;Other,NA,Significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+701e666ecf9e42a9d9e8d84ca4043528,0543f164443f38d272c49c3db16e883f,3530,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Other;Sex,NA,Not significant,Not adjusted,Both,Hospital based,Persons under investigation,NA,NA,NA,Sierra Leone,Kenema Government Hospital,1,Jan 01,2012,31,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+d6d260dcde2869a0d450d05c1ab5fc04,cc28c843b63ff087b7c5af1a8b235a1e,3634,Lassa mammarenavirus,Severity - case fatality rate (CFR),NA,0,Percentage (%),9.3,29.2,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Time,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,NA,Jan 01,2015,26,Sep 09,2021,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+0917806f0819d3a2318412fdbbe70d4a,151564392dd4c862830cfd7e1149a87d,3635,Lassa mammarenavirus,Severity - case fatality rate (CFR),21,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,174,833,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Mid outbreak,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,Mixed groups,NA,NA,833,Nigeria,NA,1,Jan 01,2019,29,Dec 12,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+2213cf7eb17eb3b170415ad482f2abce,18cbe71df8a008008543b3a75ef7fdcc,3670,Lassa mammarenavirus,Seroprevalence - IgG,0.1,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,2,1744,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Other,NA,NA,1744,Uganda,Fort Portal; Mbarara; Kampala; Mabale; Gulu,NA,NA,2006,NA,NA,2007,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+ea7661b735feda578c88f4a4f1113917,05b6e080265804743c7b0b1edd615eb4,3716,Lassa mammarenavirus,Severity - case fatality rate (CFR),27.9,0,Percentage (%),15.3,93.7,Unspecified,NA,NA,NA,NA,NA,362,1298,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Naive,NA,Time,TRUE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,NA,NA,1298,Nigeria,Irrua,NA,NA,2008,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+ea7661b735feda578c88f4a4f1113917,fd503b0e6d29cd7fcf99734a57479b6b,3716,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Not adjusted,Unspecified,Hospital based,Persons under investigation,NA,NA,1298,Nigeria,Irrua,NA,NA,2008,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+b513bd37635ebb4c9b17e394ac1fab82,2020c4f16bf165480c4415ee92d98034,3841,Lassa mammarenavirus,Severity - case fatality rate (CFR),57,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,25,44,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Persons under investigation,5,73,44,Nigeria,Plateau State,NA,NA,2016,NA,NA,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+a07d714192f45231e3edbb2921a3143c,121a90311726112766b11894d98753e5,3991,Lassa mammarenavirus,Severity - case fatality rate (CFR),13.8,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,100,724,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Adjusted,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,Persons under investigation,NA,NA,724,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+a07d714192f45231e3edbb2921a3143c,b4fa8c394ff055430c0215a384b26fd1,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation;Other;Sex,Healthcare;Livestock and animal herders;Other,Significant,Not adjusted,Both,Population based,Persons under investigation,NA,NA,1991,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a07d714192f45231e3edbb2921a3143c,ae5e96ccadf6aefa42373b57503d9ffa,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Other,NA,Not significant,Not adjusted,Both,Population based,Persons under investigation,NA,NA,1991,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a07d714192f45231e3edbb2921a3143c,4ce86c5a5930b1ff36f8a439ed46d03b,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Occupation;Other;Sex,Livestock and animal herders;Other,Significant,Adjusted,Both,Population based,Persons under investigation,NA,NA,1991,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a07d714192f45231e3edbb2921a3143c,c1b70ea3796175592abebee7a671801b,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Infection,Age;Occupation;Other,Healthcare;Other,Not significant,Adjusted,Both,Population based,Persons under investigation,NA,NA,1991,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a07d714192f45231e3edbb2921a3143c,931393f85823fe37ab3d5c5d51a08505,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Occupation;Other,Livestock and animal herders;Other,Significant,Not adjusted,Both,Population based,Persons under investigation,NA,NA,724,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a07d714192f45231e3edbb2921a3143c,a44c0f0bd63fbb681775075396d1e08e,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Occupation;Other;Sex,Healthcare;Other,Not significant,Not adjusted,Both,Population based,Persons under investigation,NA,NA,724,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a07d714192f45231e3edbb2921a3143c,a83ceae57e800b2d16871e9f15b492aa,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Other,NA,Significant,Adjusted,Both,Population based,Persons under investigation,NA,NA,724,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+a07d714192f45231e3edbb2921a3143c,dbf22d0ba36744169ce2f609b8b1e6fd,3991,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Not significant,Adjusted,Both,Population based,Persons under investigation,NA,NA,724,Nigeria,NA,NA,Jan 01,2018,NA,Jun 06,2019,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+c3f09a0b8b9fa5fbc00d96da71cf00ed,093743d75d4b2105f5a8e2c94866b8b2,4144,Lassa mammarenavirus,Reproduction number (Basic R0),1.1868,0,No units,NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,Next generation matrix,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,NA,NA,2018,NA,NA,2022,NA,FALSE,NA,NA,FALSE,FALSE,Other,Reproduction number
+021d6376065da237ad5bf0f0aaf3bdfa,b4247077acc06c51dcbf75fc9cebe627,4207,Lassa mammarenavirus,Reproduction number (Basic R0),1.1299,0,No units,NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,Next generation matrix,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Population based,Persons under investigation,NA,NA,NA,Nigeria,NA,3,Jan 01,2021,19,May 05,2021,NA,FALSE,NA,NA,FALSE,FALSE,Other,Reproduction number
+c772c487685dfd7937fbdd62ceb345e2,8f95b624585313d452da9759f14bd397,4314,Lassa mammarenavirus,Severity - case fatality rate (CFR),19,0,Percentage (%),16,31,Unspecified,NA,NA,NA,NA,NA,12,62,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,Occupation;Other,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Population based,Persons under investigation,NA,NA,62,Nigeria,Ebonyi State,1,Jan 01,2018,31,Mar 03,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+c772c487685dfd7937fbdd62ceb345e2,4af4b0814db94496fcc2190c8b9f10d1,4314,Lassa mammarenavirus,Human delay - incubation period,7,0,Days,NA,NA,Unspecified,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Population based,Persons under investigation,NA,NA,62,Nigeria,Ebonyi State,1,Jan 01,2018,31,Mar 03,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+752ac23027767c5ec29cb0fef9e384cc,d94b5eb8d8f84cd2c9fa1e2446db10d0,4595,Lassa mammarenavirus,Seroprevalence - Unspecified,15.5,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,15,97,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,Age;Occupation;Sex,TRUE,FALSE,NA,NA,NA,NA,NA,Both,Trade / business based,Mixed groups,3,56,97,Nigeria,Pankshin; Plateau State,NA,Aug 08,1976,NA,Aug 08,1976,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+42ccf54e7cd02f19636ec52c7d13b4f5,e02e00e6a3dc790cfa552fa396ffd2c1,4684,Lassa mammarenavirus,Seroprevalence - IFA,NA,0,Percentage (%),0,52,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,Age;Region;Sex,TRUE,TRUE,NA,NA,NA,NA,NA,Both,Community based,General population,NA,NA,NA,Sierra Leone,Palima; Semewabu; Konia; Tongola; Njakundoma; Niahun; Kpandebu; Neama; Lowoma; Landoma; Bomie; Yengema; Kamethe; Kamabunyele; Kathumpe,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,NA,Seroprevalence
+cd4e9908d4a31a198a5ddce7ed91d01d,1454bed7990e98c8b1e9835af7d2c643,4727,Lassa mammarenavirus,Severity - case fatality rate (CFR),63,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,36,57,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,Unspecified,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Both,Hospital based,Children,0,18,57,Sierra Leone,Kenema District Of Eastern Province,1,Jan 01,2012,31,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+cd4e9908d4a31a198a5ddce7ed91d01d,c114b147c99ec124de78f7d2acaa03a4,4727,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Age;Other;Sex,NA,Not significant,Not adjusted,Both,Hospital based,Children,0,18,57,Sierra Leone,Kenema District Of Eastern Province,1,Jan 01,2012,31,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+cd4e9908d4a31a198a5ddce7ed91d01d,bcdebe68357b779e9d21189254de0003,4727,Lassa mammarenavirus,Risk factors,NA,0,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Endemic,NA,NA,NA,FALSE,FALSE,Death,Other,NA,Significant,Not adjusted,Both,Hospital based,Children,0,18,57,Sierra Leone,Kenema District Of Eastern Province,1,Jan 01,2012,31,Dec 12,2018,NA,FALSE,NA,NA,FALSE,FALSE,NA,Risk factors
+b895ff1b44ba2b783c78ba3185fb2c28,5e69fddc0a061ad178276391ecac3022,4745,Lassa mammarenavirus,Severity - case fatality rate (CFR),36,0,Percentage (%),NA,NA,Unspecified,NA,NA,NA,NA,NA,4,11,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,Naive,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,20,56,11,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Severity
+b895ff1b44ba2b783c78ba3185fb2c28,a2ca580f89322f36e2859c898b2301c3,4745,Lassa mammarenavirus,Human delay - incubation period,NA,0,Days,1,24,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,20,56,11,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+b895ff1b44ba2b783c78ba3185fb2c28,1542e721abbc41cc4da0c55632756270,4745,Lassa mammarenavirus,Human delay - symptom onset>admission to care,4,0,Days,NA,NA,Mean,NA,NA,0,7,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,20,56,11,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+b895ff1b44ba2b783c78ba3185fb2c28,c3fe8ef7298eea1b3ed9ae1236fb518b,4745,Lassa mammarenavirus,Human delay - symptom onset>discharge/recovery,14,0,Days,NA,NA,Mean,NA,NA,11,21,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,20,56,11,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay
+b895ff1b44ba2b783c78ba3185fb2c28,11528d627cb64bd27a2d8a7c3384c619,4745,Lassa mammarenavirus,Human delay - symptom onset>death,12,0,Days,NA,NA,Mean,NA,NA,12,15,Range,NA,NA,NA,NA,NA,FALSE,NA,NA,FALSE,FALSE,Unspecified,NA,NA,NA,FALSE,FALSE,NA,NA,NA,NA,NA,Unspecified,Hospital based,Persons under investigation,20,56,11,Liberia,Zorzor,NA,Mar 03,1972,NA,Apr 04,1972,NA,FALSE,NA,NA,FALSE,FALSE,NA,Human delay

From 55e98512cc7db4bc91184a679bf071c79c96d81a Mon Sep 17 00:00:00 2001
From: cm401 <christian.morgenstern@gmail.com>
Date: Sun, 24 Mar 2024 08:00:38 +0000
Subject: [PATCH 2/3] Add lassa files, update marburg doi to Lancet ID paper
 and add ebola medrxiv doi

---
 R/data.R | 20 ++++++++++++--------
 1 file changed, 12 insertions(+), 8 deletions(-)

diff --git a/R/data.R b/R/data.R
index 4eeb3fa..6163838 100644
--- a/R/data.R
+++ b/R/data.R
@@ -16,25 +16,29 @@
 priority_pathogens <- function() {
 
   data.frame(
-    pathogen = c("marburg", "ebola"),
-    articles_screened = c(4460, 9563),
-    articles_extracted = c(42, 520),
-    doi = c("10.1101/2023.07.10.23292424v1", NA),
+    pathogen = c("marburg", "ebola","lassa"),
+    articles_screened = c(4460, 9563,5414),
+    articles_extracted = c(42, 520,157),
+    doi = c("10.1016/S1473-3099(23)00515-7", "10.1101/2024.03.20.24304571", NA),
     articles_file = c(
       "marburg_article.csv",
-      "ebola_articles.csv"
+      "ebola_articles.csv",
+      "lassa_articles.csv"
     ),
     params_file = c(
       "marburg_parameter.csv",
-      "ebola_parameters.csv"
+      "ebola_parameters.csv",
+      "lassa_parameters.csv"
     ),
     models_file = c(
       "marburg_model.csv",
-      "ebola_models.csv"
+      "ebola_models.csv",
+      "lassa_models.csv"
     ),
     outbreaks_file = c(
       "marburg_outbreak.csv",
-      NA
+      NA,
+      "lassa_outbreaks.csv"
     )
   )
 }

From 14a5c172b07e68ed7f339f4bfb94a34c6c138939 Mon Sep 17 00:00:00 2001
From: cm401 <christian.morgenstern@gmail.com>
Date: Mon, 25 Mar 2024 10:30:03 +0000
Subject: [PATCH 3/3] Add doi for Lassa medrxiv paper

---
 R/data.R | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/R/data.R b/R/data.R
index 6163838..d69217c 100644
--- a/R/data.R
+++ b/R/data.R
@@ -19,7 +19,7 @@ priority_pathogens <- function() {
     pathogen = c("marburg", "ebola","lassa"),
     articles_screened = c(4460, 9563,5414),
     articles_extracted = c(42, 520,157),
-    doi = c("10.1016/S1473-3099(23)00515-7", "10.1101/2024.03.20.24304571", NA),
+    doi = c("10.1016/S1473-3099(23)00515-7", "10.1101/2024.03.20.24304571", "10.1101/2024.03.23.24304596"),
     articles_file = c(
       "marburg_article.csv",
       "ebola_articles.csv",