rSFFreader is a R package to read in and manipulate high throughput sequence data stored in the SFF file format. Currently Roche 454 sequencers and Life Sciences Ion Torrent sequencers output data in this format.
Specificiation are written such that they abide by the description http://www.ncbi.nlm.nih.gov/Traces/trace.cgi?cmd=show&f=formats&m=doc&s=formats#sff
Future development will include
Writing out SFF files Reading in flowgrams Integration of flowgrams with sequence data