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  1. A single page Flask app with a GUI for performing differential expression with scvi-tools. Returns a volcano plot and downloadable tables with DE results.

    Python 2 1

  2. Visualization tools for C. elegans single cell RNA sequencing data

    Shell 1

  3. seqdepth Public

    Code and notebooks for seqdepth project

    Jupyter Notebook

  4. poseidon system - open source syringe pumps and microscope for laboratories

    Python 135 47

  5. Code for producing the analysis in the "Quantifying the tradeoff between sequencing depth and cell number in single-cell RNA-seq" manuscript

    Jupyter Notebook 14 1

  6. Example analysis using the 'Single cell studies database'

    Jupyter Notebook 6 2

166 contributions in the last year

Dec Jan Feb Mar Apr May Jun Jul Aug Sep Oct Nov Mon Wed Fri

Contribution activity

December 2022

1 contribution in private repositories Dec 1

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