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bftools
3D_Hela_getdata.sh
3D_Hela_tif2ometiff.sh
AUTHORS
CHANGELOG
CONTRIBUTING.md
LICENSE
README.md
hela_roi.sh
run.sh

README.md

murphylab-hela-datasets

This repository contains a script that converts the images in the Murphy Lab 2D HeLa and 3D HeLa datasets into OME.TIFFs.

Running

Run the script run.sh using the command

bash ./run.sh

The script will

  1. download the images from the Murphy Lab website
  2. convert the TIFF files into OME.TIFFs using Bioformats

TODO

[] Script for 2D HeLa collection