Large-Scale Transcriptome Analysis Pipeline-Lite on credit card-sized ARM computer
If you use LSTrAP-Lite in your research, please cite: Inferring biosynthetic and gene regulatory networks from Artemisia annua RNA sequencing data on a credit card-sized ARM computer. Tan and Mutwil, 2019. (https://doi.org/10.1101/661058)
What is LSTrAP-Lite?
Below, you can find the tutorial on how to build your own co-expression networks with the source code and example data provided. An advanced tutorial on how to annotate the co-expression neighbourhood using mercator is also available.
Feel free to contact us if you have further questions.
LSTrAP-Lite will not have been possible without the various open-source projects.
Issues and feedback can be submitted through GitHub or to Qiao Wen Tan.