Open Source GENome Tool Component: Disease XML Files + python parsing code opensourcegenome.org
===== Verion 0.0.1
This version is a proof-of-concept that delivers very limited results for 5 SNPs
How to use:
Clone git repo (into terminal, type 'git clone https://github.com/mvolz/osgen.git')
CD into folder 'osgen'
Into the terminal type 'python main.py -i input_file -o output_file' where input_file is the path to your downloaded raw genome file.
Open the resulting .pdf to read your results
Python code is included to parse the XML files locally.
Includes snpy library from: https://github.com/superbobry/snpy