Whenever you update JMDict in the Dictionary updater it fails, complaining that it can't create /sdcard/Android/data/sk.baka.aedict3/files/aedict3/dictionaries/JMDICT/null.
When you back out to the main menu you then get put into the original welcome setup screen saying you need to download JMDICT, which (fortunately) then works.
This has been happening on all three of my android devices and has persisted over several updates of the app.